GEISHA - A Chicken Embryo Gene Expression Database
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PRKDC
protein kinase, DNA-activated, catalytic polypeptide

Gene
Official SymbolPRKDC
Official Full Nameprotein kinase, DNA-activated, catalytic polypeptide
CGNC ID9779
also known asDNA-PKCS, dnapkcs, DNA-dependent protein kinase catalytic subunit|DNA-PK catalytic subunit, DNA-dependent protein kinase catalytic subunit, DNA-PK catalytic subunit
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204658
PolypeptideNP_989989
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.189
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human5591ENSG00000253729MIM:600899
Mouse19090ENSMUSG00000022672All phenotypic alleles (9):Spontaneous(2) Chemically induced(2) Targeted, knock-out(3) Targeted, other(1) Transgenic(1) MGI:104779
Xenopus100488663, 373602494613
Zebrafish562283ENSDARG00000075083ZDB-GENE-030131-9008ZFIN:ZDB-GENE-030131-9008
Gene Ontology
Molecular FunctionATP binding, DNA binding, DNA-dependent protein kinase activity
Biological ProcessDNA repair, double-strand break repair, double-strand break repair via homologous recombination, more...double-strand break repair via nonhomologous end joining
Cellular Componentnonhomologous end joining complex, nucleolus, nucleoplasm
Links to other databases
Entrez Gene395376
Ensembl GeneENSGALG00000012914
KEGGgga:395376
GEISHA Id53PData SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
CGTTTGGCTCAGCCACACAGTTTCTGCCCGTGCCAGAGCTGATGCCTTTCCGCCTGACGCGCCAGTTTGTCAATCTGAT
GATGCCAGTGAAGGAGTGGGGCCTCATTTACAGCGTGATGGTGCATGCCCTGAGAGCGTACCGTGCGGATCCCGATCTC
CTCATCAGCACAATGGATGTGTTTGTAAAAGAGCCTTCTCTGGACTGGAAGAACTTTGAACAAAGGCAGCTGAAAAAAG
GAGGCACGTGGATTAAGGAAATAAACACCGCTGAAGTAAACTGGTACCCCTTGCAAAAAGTCAGCTATGTCAAAAGGAA
GCTTACGGGTGCCAATCCTGCACGAATCACTTGTGATGAGCTGCGCCTGGGCTATGAGAAGTTGCCTTTTTACAATGAC
TTTGCAGCTGTTGCTCGTGGCAGCGCTGACCATAATATCAGAGCCAAAGAGCCAGAGGACAGACTGTCTGAGGAGACCC
AGGTGCGGTGCCTGATAGACCAAGCGACGGACCCCAACCTCCTCGGCAGGGTGTGGGAAGGATGGGAACCTTGGATGTG
AGGCTGCTCTCGAAAGTCCAGTCTGACGAGGGGAGGGAACCCTCATACACAGCTGCAGCCAGTCTCAATTTTAAGGCCA
AGGACGCGAAAAGTCACTTTTATCGTCGTTGGTTAACTTGACTA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 21
stage 21
stage 23
Limb Buds
Ubiquitous Embryonic
Unlabeled Extraembryonic
longer color
25
stage 25
Limb Buds
Pharyngeal Arches and Clefts
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.189

Mouse

EmageMGI:104779
EurexpressMGI:104779
MGI GXDMGI:104779

Frog

Xenbase494613

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-9008
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