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A chicken embryo gene expression database 		 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report
GEISHA Id53P
 NCBIEnsembl
Gene NamePRKDCPRKDC_CHICK
AliasesDNA-PKCS, DNA-dependent protein kinase catalytic subunit 
Gene Descriptionprotein kinase, DNA-activated, catalytic polypeptideDNA-dependent protein kinase catalytic subunit (EC 2.7.11.1) (DNA-PK catalytic subunit) (DNA-PKcs). [Source:Uniprot/SWISSPROT;Acc:Q8QGX4]
Gene Ontologyshow
GO:0000723 telomere maintenance IEA
GO:0001756 somitogenesis IEA
GO:0002328 pro-B cell differentiation IEA
GO:0003677 DNA binding IEA
GO:0004677 DNA-dependent protein kinase activity IEA
GO:0005488 binding IEA
GO:0005524 ATP binding IEA
GO:0005634 nucleus IEA
GO:0006303 double-strand break repair via nonhomologous end joining IEA
GO:0006915 apoptosis IEA
GO:0007420 brain development IEA
GO:0007507 heart development IEA
GO:0010332 response to gamma radiation IEA
GO:0016301 kinase activity IEA
GO:0016740 transferase activity IEA
GO:0016773 phosphotransferase activity, alcohol group as acceptor IEA
GO:0033077 T cell differentiation in the thymus IEA
GO:0033152 immunoglobulin V(D)J recombination IEA
GO:0033153 T cell receptor V(D)J recombination IEA
show
GO:0000723 telomere maintenance IEA
GO:0001756 somitogenesis IEA
GO:0002328 pro-B cell differentiation IEA
GO:0003677 DNA binding IEA
GO:0004674 protein serine/threonine kinase activity IEA
GO:0004677 DNA-dependent protein kinase activity IEA
GO:0005524 ATP binding IEA
GO:0005634 nucleus IEA
GO:0006281 DNA repair IEA
GO:0006302 double-strand break repair IEA
GO:0006303 double-strand break repair via nonhomologous end joining IEA
GO:0006915 apoptosis IEA
GO:0006974 response to DNA damage stimulus IEA
GO:0007420 brain development IEA
GO:0007507 heart development IEA
GO:0010332 response to gamma radiation IEA
GO:0016301 kinase activity IEA
GO:0016740 transferase activity IEA
GO:0016773 phosphotransferase activity, alcohol group as acceptor IEA
GO:0033077 T cell differentiation in the thymus IEA
GO:0033152 immunoglobulin V(D)J recombination IEA
GO:0033153 T cell receptor V(D)J recombination IEA
NCBI Nucleotide HitNM_204658 show details
scoreevaluealignment lengthdescription
6530.0673Gallus gallus protein kinase, DNA-activated, catalytic polypeptide (PRKDC), mRNA
Ensembl Genome Map
contig view
5' Sequenceshow
CGTTTGGCTCAGCCACACAGTTTCTGCCCGTGCCAGAGCTGATGCCTTTCCGCCTGACGCGCCAGTTTGTCAATCTGAT
GATGCCAGTGAAGGAGTGGGGCCTCATTTACAGCGTGATGGTGCATGCCCTGAGAGCGTACCGTGCGGATCCCGATCTC
CTCATCAGCACAATGGATGTGTTTGTAAAAGAGCCTTCTCTGGACTGGAAGAACTTTGAACAAAGGCAGCTGAAAAAAG
GAGGCACGTGGATTAAGGAAATAAACACCGCTGAAGTAAACTGGTACCCCTTGCAAAAAGTCAGCTATGTCAAAAGGAA
GCTTACGGGTGCCAATCCTGCACGAATCACTTGTGATGAGCTGCGCCTGGGCTATGAGAAGTTGCCTTTTTACAATGAC
TTTGCAGCTGTTGCTCGTGGCAGCGCTGACCATAATATCAGAGCCAAAGAGCCAGAGGACAGACTGTCTGAGGAGACCC
AGGTGCGGTGCCTGATAGACCAAGCGACGGACCCCAACCTCCTCGGCAGGGTGTGGGAAGGATGGGAACCTTGGATGTG
AGGCTGCTCTCGAAAGTCCAGTCTGACGAGGGGAGGGAACCCTCATACACAGCTGCAGCCAGTCTCAATTTTAAGGCCA
AGGACGCGAAAAGTCACTTTTATCGTCGTTGGTTAACTTGACTA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 21
stage 21
stage 23

Limb Buds

Ubiquitous Embryonic

Unlabeled Extraembryonic

longer color

25
stage 25

Limb Buds

Pharyngeal Arches and Clefts

 
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