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A chicken embryo gene expression database 		 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report
GEISHA IdA10
 NCBIEnsembl
Gene NameRCJMB04_4k2NP_001025942.1
AliasesRCJMB04_4k2, PPFIBP1, PTPRF interacting protein binding protein 1 
Gene DescriptionPTPRF interacting protein, binding protein 1 (liprin beta 1)PTPRF interacting protein binding protein 1 [Source:RefSeq_peptide;Acc:NP_001025942]
Gene Ontologyshow
GO:0003677 DNA binding IEA
GO:0005634 nucleus IEA
GO:0008907 integrase activity IEA
GO:0015074 DNA integration IEA
show
GO:0003677 DNA binding IEA
GO:0008907 integrase activity IEA
GO:0015074 DNA integration IEA
NCBI Nucleotide HitNM_001030771 show details
scoreevaluealignment lengthdescription
8460.0862Gallus gallus PTPRF interacting protein, binding protein 1 (liprin beta 1) (PPFIBP1), mRNA
Ensembl Genome Map
contig view
5' Sequenceshow
GCATCATTTTACCTTCTTAGAGCATCATTATTTTTCCTTGAAGGTCATCAAATGTTAAAAGCATTAACTAGCCAATGGA
AGTTTTTTTGTCAGGCTTTCTGTCTTGCGAGGTGTCCTAGCCAAAAGCAAACAAAAAGTACTGTTAATTACAGCAGTCT
TTTATACAGTGTTGAGCATTGCATGTATTTTAGCACAATGGCATGAAGCTTCTTTGCTTTGTAACAAGAAAAAAAAAAG
CCCAGCTGCTCCTTGTGGATACTGTTTGGCTTTTACAAGAGCTTGTTGCTCGTTTCATCACTGCCCGTGCTGGAAGTGA
GACCATTGCTGACACACTGATGTGTGGTTTAATGGATCATGGATTTGTGCTGGTCCTGTGGGTAGGAAAGGAAGGAAGG
GGATTCCATGGACCTTGCAGCAGGTGTTGGGGGTAGACCAGAGATGTGTTCTAGCACTCTGCTGCTATAGCCTTACGAG
CTGTTACCAGTCAGGTTGGTTTTTTTGTTGGTTGGTTTTTTTGTTGTTGTTGTTTTCTTTTGAAAGGTATGCAGTTTGG
GCTAATTTTCATGTGCAAAGATGAAAACTGTGATGTGGACCAGTTGTGTTATATACAATATCAAGTGCTGCCATACTCT
CTTCAGTAGCTGGAGCCAGGCAAATGAGCCACGTTGTATTCGTGAAACAGTTTGTGCCACTTCCCATTTTTCTACAGAC
AGATCACACCTGGTGCTTTATTCAGAACTCTGACTGAGGAGCACCCACAAGTAATTTGCTGTCTGTTGTTTCTTCTTCT
GCAGTTCTGGGGGTGGCTGAGCTATTCCGACCAGGCAAAACCACCCCGTTCTGTAACGCCTGCTTGCCACTGT
3' Sequenceshow
TTGTTCCCGCGGAATAGGGAGAATTTTCTAGGACTTTTCCGGGGCAATTAACATTCCACAAGGTTTTTGGGTGTTTTTT
GGGTGTTAGCGGGGCGAAATATTTAATTCGCTTTTTTATCTGGGTGCACTGCGTTTTTCACAGGCAAGAGTTTTTTTTT
AAAGAAAAAAAAGCCGGCGGGTCCCTGGGAAACTTTGGTTTAAAAGGGTTGTTTTGTTTCTCTGCCCGGGGGGGGAAGG
AAACCATGGGACACAGAAAGGTGGTTAAAGGATCAAGAATGGTGGCTGGTCCTGGGTAGAAAAGAAGAAAGGGATTTCT
TGCCCTTGCACCAGGGTTTTGGGGTAAGCCCAAAAAGTGTTTAGCCTTTTGGTTGTTAAGCTTTAGGCGAGTTGTTACC
AGTCAGGTTGGTTTTTTTTGTGGGTGGGTTTTTTGTGGGGGTGGTGTTTTTTTTGAAAAGGTATGCAGTTTGGGATAAT
TTTCATGGGCAGGAAGATGAAAATTTTGATGTGGACCAGTTGTGTTATATACAATTTCAAGTGGGCTGCCATACTTTTT
TCAGTAGCTGGAGCCAGGCAAATGAGCCACGTTGTAGGTTCGTGAAACAGTTTGTGCCACTTCCCATTTTTCTACAGAC
AGATCACACGGCTGGTGCTTTATTCAGAATTCTGACTGAGGAGCACCCACAAGTAATTGGCGGTGTCGGTTGTTTCTTC
TTCGGCAGTTCTGGGGGTGGCTGAGTTATTCCGAGGCCAGGCAGAACCACCCCGTTCTGTAACGCCTGCTTGCCACTGT
CAGGTACGGAAATCCTCGTGGTGTGGGTTCAGGGCTTGCTTTCTGTGAATGTTCTGCAAGGTGGTGGGTTCAAAACCCC
GTTTTGCCACACGCAGCAGAGGCACCGGAAGAGGCATTGTGCAGGTTTTTGAGCAGAAGTATTCCTTCAGATTTTCCTG
AGCAGGGATACTGGTTAGTGGGCACAGTGAATGAATATTCACAGGAACAAAGGGGCTGGAGTGACACAGTGTTATGTGC
TGAAACAGGTACAAGCAAAGGTTCAGATTTGGTTTCTCATTTTGCTGCTGTTAACAAGCCTATCAGCAGCAGCAGATGA
TCAGGTTTTTTTTTAAGTCCGGTGTAAGTAAAGTTTTATTCCAAACACCCTGTTTGGTTGGGTTTCTTGGTTGGAGAGC
AGGTTGTCATTCAGAGCTGCCTTTCAGTGGTGAACCATGGTGGTTTTGCGGGGGGCTGTTAGGAAAGCATTGGTAACAG
TGGGGGAGATTTATGCGTGCATGTGCACAAAGCTGATACCATTGTGGTATTTTGGGTGTTTTTGAAGAGGGCAACGTAA
TTACTGTGTATTGCCATGTAAAATCCGGAATAAAAATCTGTGGAAAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
GAAAAAAACTCGAGGGGGGGCCCGGTACCCAATCGCCCTTAGTTACTTT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10

Somites

caudal

13-17
stage 16
stage 17

Somites

caudal

overstained
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