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A chicken embryo gene expression database 		 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report

Probe 1

GEISHA IdA35
 NCBIEnsembl
Gene NameIGF2BP3IF2B3_CHICK
Gene Descriptioninsulin-like growth factor 2 mRNA binding protein 3Insulin-like growth factor 2 mRNA-binding protein 3 (IGF2 mRNA-binding protein 3) (IGF-II mRNA-binding protein 3) (IMP-3) (VICKZ family member 3). [Source:Uniprot/SWISSPROT;Acc:Q5ZLP8]
Gene Ontologyshow
GO:0000166 nucleotide binding IEA
GO:0003723 RNA binding IEA
GO:0005634 nucleus IEA
GO:0005737 cytoplasm IEA
GO:0006417 regulation of translation IEA
show
GO:0000166 nucleotide binding IEA
GO:0003676 nucleic acid binding IEA
GO:0003723 RNA binding IEA
GO:0005634 nucleus IEA
GO:0006417 regulation of translation IEA
NCBI Nucleotide HitNM_001006359 show details
scoreevaluealignment lengthdescription
5870.0587Gallus gallus insulin-like growth factor 2 mRNA binding protein 3 (IGF2BP3), mRNA
Ensembl Genome Map
contig view
5' Sequenceshow
GGTTGAAACAAGTGGCATTTTTTAAAAAGAATTTGGTTGCATTTTTACATAACACTGCCATGAATAACCTAAGGGAAGT
GTTGAATGGTGTTGGCCAGGGCATAAAAAGATAAATATGCATTTTACTAAACTACCTCAGGCATTTAGTACCTCAATGA
GAAATTGTTCCTTTTTTGCTTTTTTTTTTGGTATTTTGTATACTTTATAAAGCTAATAGTTCTTGAGCATTTTATTTTT
TTAAAAAAAATTAAAATTTGATCAGCCACCAGCCAGGAGTACTACGGACTTATCGGGGAAAACTATAGCAGAGCACTTC
TAGCTGCTGGCTGATGGGAGTAAGGTGGGTAAAAAAAACACGGCCTCAGATTTTCTGAGGGCTTCAACACCATCATTTG
TTTAAAAAAAAAAAAAATTCAGTGAATGTTCAAAAGATAGCGAATGATGCCAACATTCTGATAGCAGCAATGCCGTTTA
GTTTTCTTTTAAGATGGGATGAAAAAGTTTGTGACGGTACTTTTTTGGGAACAGGACAAGGAAGTGATGGCAAGAGGCT
GGGGTTGGGGGAAAAATTTAAAAGCTGCAAGAGGCTGAATTTTTTTTTTGTGCT
3' Sequenceshow
TTTCCCAAAGATCATTGTTGTACAGATTAGATAATTTTGAAAATGGTCTGAAGTGTTTTTCCTGCATCTCTTCTTTACT
AATTGGTTTAAAAACCACAAACTTATGTTGTAGTGTTAGCAAAGAAAAATGAGTTTCTTTTCCTTTTTTGACAGTGACC
TTCATTCTAGCCTTTAGGATAATTTTTTTTCTTACAATGAATTTAAAATTACTGAAGTATGAAAAGTCATAGCATTTTA
ATTTTTGTCGAGGCTTAAGTCAGTCTGATGTTCCTTTCTTAACATTTGAGAAGGATTTGACTTCATTATTTTCCATAAA
AATTATTTACAAATAGGCGCTGCATTTACATCTACTGATTTAATTACTGTCATATCTCTTAAATTTCTAGACTTAGTAT
GAGAAATCATGTTTTATTTTCAATTGAGACTTGGTAATTTGGAGTATTTGGGAATAGCTAGAAAGTAAATACTGTAAAT
GATTTCAAAATCCACAAAGTATGGATCATTTTTCATCTGTAATGTGCCCCCCAATGCAGCTCCACTTGCCAGATGCCTC
TGAATGGAATAAAGAGTTTAACTCCTATCATCAG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6

Area Pellucida

 
7-12
stage 8
stage 10
stage 11

Lateral Plate Mesoderm

Neural Plate/Tube

 
13-18
stage 14
stage 17

Somites

Unlabeled Extraembryonic

Widespread Expression

Wing Mesenchyme

 
19-22
stage 22

Pharyngeal Arches and Clefts

Somites

Wing Mesenchyme

 

Probe 2

GEISHA IdD47
 NCBIEnsembl
Gene NameIGF2BP3IF2B3_CHICK
Gene Descriptioninsulin-like growth factor 2 mRNA binding protein 3Insulin-like growth factor 2 mRNA-binding protein 3 (IGF2 mRNA-binding protein 3) (IGF-II mRNA-binding protein 3) (IMP-3) (VICKZ family member 3). [Source:Uniprot/SWISSPROT;Acc:Q5ZLP8]
Gene Ontologyshow
GO:0000166 nucleotide binding IEA
GO:0003723 RNA binding IEA
GO:0005634 nucleus IEA
GO:0005737 cytoplasm IEA
GO:0006417 regulation of translation IEA
show
GO:0000166 nucleotide binding IEA
GO:0003676 nucleic acid binding IEA
GO:0003723 RNA binding IEA
GO:0005634 nucleus IEA
GO:0006417 regulation of translation IEA
NCBI Nucleotide HitNM_001006359 show details
scoreevaluealignment lengthdescription
9420.0973Gallus gallus insulin-like growth factor 2 mRNA binding protein 3 (IGF2BP3), mRNA
Ensembl Genome Map
contig view
5' Sequenceshow
GATTATTCCCCAACAATTTTAGAACTTGGTTTAATGAAGCTTTCTCTTCTGAGTTCACTGGTTTAAAAGCAAAAACAAA
AACAAAAAAAAAAAAAAGAAAAAAGAAAAAAGGAAAAAAAGAAAAGGCATTGCTCTTATAGGTCCAGCTGTAAAAGAAG
AAACACACGAGGAGGGTGGGATGGTGGGTGGGCTAGGGTTAGAGCAAGGGTATCGACAAGAGTTTAAGTGTTAGTCCCA
ATGTTGAAACAAGTGGCATTTTTTAAAAAGAATTTGGTTGCATTTTTACATAACACTGCCATGAATAACCTAAGGGAAG
TGTTGAATGGTGTTGGCCAGGGCATAAAAAGATAAATATGCATTTTACTAAACTACCTCAGGCATTTAGTACCTCAATG
AGAAATTGTTCCTTTTTTGCTTTTTTTTTTTGGTATTTTGTATACTTTATAAAGCTAATAGTTCTTGAGCATTTTATTT
TTTTAAAAAAAATTAAAATTTGATCAGCCACCAGCCAGGAGTACTACGGACTTATCGGGGAAAACTATAGCAGAGCACT
TCTAGCTGCTGGCTGATGGGAGTAAGGTGGGTAAAAAAAACACGGCCTCAGATTTTCTGAGGGCTTCAACACCATCATT
TGTTTAAAAAAAAAAAAAATTCAGTGAATGTTCAAAAGATAGCGAATGATGCCAACATTCTGATAGCAGCAATGCCGTT
TAGTTTTCTTTTAAGATGGGATGAAAAAGTTTGTGACGGTACTTTTTTGGGAACAGGACAAGGAAATGATGGCAAGAGG
CTGGGGTTGGGGGAAAAATTTANAAAGCTGCAAGAGGCTGAATTTTTTTTTTGTGCTACTTGATTGAATGCATGAAACC
TTTGTGCCTTTGACCATCACTACCTAATAAGGCTACATTTAACCATTTGCAGCCCATTTGGACTTTGCCATTTTGTTCA
AAGAGCAAGCTTCATCTTCATTTTGAAAAAAAATT
3' Sequenceshow
GGCTACCTCAGTTTAAAAAAAAAAAATGTGGCAAGGCACATGGTGCATAAAGACTGCTGTGTGTGTGTGTGTGCGCGTG
CGCGCCTGGGTATGTGTGTGGTCGACAGAGCCATGCTATTACCTCTGAACCTTTTTTTGGGTGATGTTTTTTGTGCATG
AGATGATCAGAATCACCATGCTGCACTGATTTGGGAGGGGCACAACGAGCAAAAACATTTGTTTCATCATTTTGTTATC
TACCTGGCTTAGGTTCATGTTGAAATAGAGGCATTACTACATAGACTAGATAATTTTGGCCCAAAGATCATTGTTGTAC
AGATTAGATAATTTTGAAAATGGTCTGAAGGGTGTTTTTCCTGCATCTCTTCTTTACTAATTGGTTTAAAAACCACAAA
CTTGGATGTTGTAGTGTTAGCAAAGAAAAATGAGTTTCTTTTCCTTTTTTGACAGGGTGACCTTCATTCTAGCCTTTAG
GATAATTTTTTTTCTTACAATGAATTTAGGAAATTACTGAAGTATGAAAAGTCATAGCATTTTAATTTTTGTCGAGGCT
TGGAAGTCAGTCTGATGTTCCTTTCTTAACATTTGAGAAGGATTTGACTTCATGGTATTTTCCATAAAAATTATTTACA
AATAGGCGCTGCATTTACATCTACTGGGATTTAATTACTGTCATATCTCTTAAATTTCTAGACTTAGTATGAGAAATCG
GATGTTTTATTTTCAATTGAGACTTGGTAATTTGGAGTATTTGGGAATAGCGGTAGAAAGTAAATACTGTAAATGATTT
CAAAATCCACAAAGTATGGATCATGGTTTTCATCTGTAATGTGCCCCCCAATGCAGCTCCACTTGCCAGATGCCTCGGT
GAATGGAATAAAGAGTTTAACTCCTATCATCAAAAAAAAAAAAAAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6

Area Pellucida

Neural Plate/Tube

 
7-12
stage 7
stage 12
stage 12

Anterior Intestinal Portal

Neural Plate/Tube

 
13-16
stage 16

Widespread Expression

 
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