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A chicken embryo gene expression database
 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report
GEISHA IdA47
 NCBIEnsembl
Gene NameRCJMB04_7l20ENSGALG00000014484
AliasesRCJMB04_7l20, PABPC1 
Gene Descriptionpoly(A) binding protein, cytoplasmic 1
Gene Ontologyshow
GO:0000166 nucleotide binding IEA
GO:0003723 RNA binding IEA
NCBI Nucleotide HitNM_001031597 show details
scoreevaluealignment lengthdescription
7220.0803Gallus gallus poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA
Ensembl Genome Map
contig view
CommentsPart of this clone maps to a second gene (ENSGALG00000014450), however single mRNAs from EMBL contain exons from both genes indicating that these two genes may represent splice variants of one or a gene duplication. Widespread expression at stages 9-25.
Complete Sequenceshow
GAGAGAGAGAAAGAGCTATTGAAAAAATGAATGGTATGCTGCTTAATGACCGCAAAGTATTTGTTGGAAGGTTTAAATC
CCGCAAGGAACGTGAGGCAGAGCTTGGAGCCAGAGCAAAGGAATTCACCAATGTTTACATCAAGAATTTTGGAGAAGAC
ATGGATGATGAGAGACTTAAGGAACTCTTTGGCAAGTTTGGTCCTGCCTTAAGTGTGAAAGTTATGACTGATGAGAGTG
GAAAATCCAAGGGCTTTGGCTTCGTTAGTTTTGAAAGACATGAAGATGCCCAAAAGGCTGTAGATGAGATGAATGGAAA
AGAGCTCAACGGGAAACAAATCTATGTTGGACGGGCTCAGAAAAAAGTGGAAAGACAGACGGAGCTGAAGCGTAAATTT
GAGCAAATGAAGCAGGACAGGATCACCAGATACCAGGGTGTAAACCTTTACGTGAAAAATCTCGATGATGGAATTGATG
ATGAACGTCTTCGAAAAGAATTCTCCCCATTCGGTACAATCACCAGTGCAAAGGTCATGATGGAAGGTGGACGCAGCAA
AGGATTTGGGTTTGTCTGCTTTTCGTCACCAGAAGAAGCCACCAAAGCTGTCACAGAGATGAATGGTAGAATTGTGGCT
ACTAAACCACTGTATGTAGCTCTAGCCCAGCGTAAAGAAGAGCGCCAAGCTCATCTCACCAACCAGTATATGCAGAGAA
TGGCGAGGTTGCTAAGCAGCAGTCCTGCTAATCCATGTAATCAACCCCTACCAACCATTGCACCTCCTTCCAGGTTAGC
TTCATGCCAGCTATCCCACAAGAATCAAAACCAGATGCTAGCTGATACGTCTATTTCCTACTAATTCAAAGCATGCACA
CTACTTGCTAGACCGGTAAGTCATCACTGGTACTGCTCATTGGAGATTGACAGACTCTCAACTCCATTCAAAACATGCC
TCGAGTGCTATCCTGCCCAGTCATCTTCGTTCGAAGGTTGATGAAGCTGTAGCCGTACTACAAGCCCACCAAGCTAAAG
AAGCTGCTCAAAAGGCAGTTAATAACCCTACTGGGGTTCCAAGTGTTTAATAAAAAGATCCGGGAACTGCAGTCTAGAA
CTTCGCTTCACCGAAGAAAAAAAAAAAATTTAAACATGGAAAAACTATTAAATATTGAGAAAAACATTGCAAAATATAA
AATGAATAAAAAAAAAAAAAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6

Germinal Crescent

Neural Plate/Tube

 
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