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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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ADAMTS12
ADAM metallopeptidase with thrombospondin type 1 motif 12

Gene

Official Symbol	ADAMTS12
Official Full Name	ADAM metallopeptidase with thrombospondin type 1 motif 12
CGNC ID	2393
also known as	A disintegrin and metalloproteinase with thrombospondin motifs 12
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_003642975
Polypeptide	XP_003643023
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.55100

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	427428
Ensembl Gene
KEGG	gga:427428

Entry 1

GEISHA Id	ADAMTS12.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	GTGTAACATTAGCCCCTGTCGG
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGATTCTCCTGCCCACCATCTTGG	cDNA Template Length	905
Forward cDNA Template Probe	show GTCCTTTTCATAGCACTTCTTCTGCCGTCCATTTGGCTGGTGGTGGCTGGGTCACAGAAGGGAGTTCTTGGATCACTCC ACCTCCCTTCCGCATGCAGTGGGCAATCTGGCGACGCACCCCTCTTCCACAGGTAACAGTGCAGGCTGTCCACTCTCCA TATTGCCAAAAATACTCTGGCTCTCCAATCTCATTCTCATTATTTTCTTCTTTACGAACAGTATATTCATACTTGATTC CAGGGTTAGTCTCTTGAAAGAGTAGCTGAATCCATATTGATTCATTGGTGGGTCCTGGAGCAGTCAGATTTTCTAGATC ACCTGTCCTGTCATACTGAAATACTGTTCCTGCCACTTTATATTCACCATTCCACTGGATGATAAAACCTCCATTTAGG TAATATTTTTCTGGGTCTTTACTTCGCACAGCAAGGAAGTTGCCTGCTTCTGCAACTTCTGTGACTCTGATACCCCTTG CACCTTTTGGAATTAACCCAATATCAACATATCCAGATCCTTCACTTTGATTAAATGTCATTTTCACTGTATGACAGGC AGAACCATCTCCCAGGCAAACTCCACACTGGTCTTCAGTGGCATTGGAATTTATCTCATAATCACAGCCAACAGCCTTA CACATGCCATTAATACAGATATCTCGGCTGTGCCTTCCTTCAAAGCAGGGAGTACCATCAGTGACTGCATCCAACATCT TCTCTGAAAAATGGTGATCTATTGGGCGGCAGTGGAGCTCACAGGGGTTAGCTGTGTTATAAACTGGCACCCAGTGGTA AAACTCATTTTGGTAGGGAACTGTGTCAAACTCANTGCACTGCATCTGACNAAAAGTTGGCAAGCCTTTCCGACAGGGG C

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 5

Unlabeled

7-12

stage 8

stage 9

stage 10

stage 12

Amnion
Ear/Otic Placode
Extraembryonic Blood Vessels
Head Mesenchyme
Intermediate Mesoderm
Myotome
Neural Crest
Neural Plate/Tube
Pharynx
Somatic Mesoderm
Splanchnic Mesoderm
Yolk Sack or Stalk
extraembryonic ectoderm

13-18

stage 16

Amnion
Esophagus
Foregut
Head Mesenchyme
Myotome
Notochord
Oral Pharynx
Pharyngeal Arches and Clefts
Pharynx
Sclerotome

19-24

stage 22

stage 23

Aorta
Cranial Nerve
Ear/Otic Placode
Eye
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Liver
Lung
Myotome
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Pharynx
Sclerotome
Somatic Mesoderm
Ventricles
Wing Mesenchyme

25-26

stage 26

Aorta
Atria
Blood Vessels
Foregut
Head Mesenchyme
Leg Mesenchyme
Midbrain
Myotome
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Ventricles
Wing Mesenchyme

Entry 2

GEISHA Id	ADAMTS12.Carré.2011	Data Source	Publication
Complete cDNA Template Probe	show ATGAGGGACTGCTTCCTTCCCACGGCCTTTCAGTGGAGACCGGGGAGTGCCGCCTGTCTGGTGCGGGCCGGCCCTCCCC ACGGCCGCCGCTGCATGAGGCGGGCGGAGGGGCCGGCAGCCCCCGCCCGCCGCCGGTCCGGTTCGCTCCGGGCGCGTGA ACCCCGGCGGCTCCGAGGAGCGGGGAGGGGGGTGCACCCGTCAGCATCTCCCTTCCCCCCGGCCCTCCTTCCTCCGCCG GCAGAAATCAGACACCGGGACGGCCTCGCGCAGCCCTTCTGGGGAGCGGCGCCGGAGTGCGGGCGGTGCCGGGAGGCCG CTCCGCCGCTGCCCGGCCATGCCGCGGCCCGGCTGAGCGCTCCCCTCCCGCACCATGCCATGCGTCCCGCCGAGCTGGG CGGCGAGCGGCTCCTTCTGGCTCCTCGTCCTTCACGTCCCGGCGCTGTTGTGCGGGACGGGCGCGTCGCTCTTCCCCGA CGGAAGGCAAGGTCGGTGGGACGCGGGCGGAGAGAGCTCCGGAGGGAAGGAGGGATGGAGGGAGGCGGCCGGGGCGGGC TCCGGTGGTTCCCCGCCGGGCAGCCTTGCTCCGGGTTTGCTGTTTTTCTGGTATTACCCAGGCAGGAGAGGCTGAAATC CGCCGTGCTCCGACCCCCCGCCGTGGTTCTGTCGGCGCTGCGCTGGCAATTTATCAAGACACTGCAAGAATACGAAGTG GTTGATCCAGCAAGAGTAGATGCAAATGGGCATTTTGTTTCTTTTAATTTACACCATCACATCTCAAACACAAGAAAGA GGAGAGATCTCGGCAAAAAGGAGAATGCGGTATATTATAAAATTAACCACAAGGAGAAGGATCTGTTTTTCAACTTGAC TATCCACATGGGATTCCTTTCCCACAACTACGTAGTAGAGAGGAGACGTGGCAACCATAGTCGTGCGAAGATTGCAATG CACTCAGGAGTTCCTTGCCACTTTATTGGCTCAGTATTGCAACCAGGTTCTGGGAGCGGAACAGCAGCAATCAGCACTT GTGATGGCTTGACTGGGTATTTCCATCTGCCCCATGGGGATTACTTCATCGAGCCCATTAAAAAGCATCTACAGAAAAA GGGAACACCCCAACCCCACATTATCTATGAAGCAAATACCCTTCCAAATGCTCTACGGAGAAGACGAGCAGTCCCAGTG GAAGAAGAACAAGCATGTGGAATGAATGACACCCTTAACTTTTTCAAACAAGAAGATCATCGGAGGGAGAAATGGGAAC AAAATCATGTGGCTGTCAGAAAGGTTTCTCGGCGATCTGTCAGCAAGGAGCGATGGGTGGAGACGCTTGTGGTTGCAGA CAGTAAGATGGTTGAATATCATGGAAGCGACCACGTGGAATCATACATCCTCACTATCATGAATATGGTCACAGGGTTG TTCCATGATCCAAGCATTGGCAATGCAATTCACATTGTTCTGGTCCGGCTCATCCTTTTTGAGGAGGAGGAGCAAGGCT TGAAGATAGTTCACCACGCTGATAAGACACTAGCCAGCTTCTGCAAATGGCAAAAGAGTGTCAATCCTAAGAGTGACGT CAACCCTACGCACCACGATGTGGCTGTTCTTCTAACAAGAAAGGACATTTGTGCTGGCATGAATCGTCCGTGTGAAACC TTAGGTTTATCTCATCTGTCAGGCATGTGTCAGCCTCACAGAAGCTGCAACATCAATGAAGATTCTGGTCTTCCGTTGG CATTCACTATTGCTCATGAACTTGGACACAGTTTTGGTATCCAGCATGACGGAAAAGAAAATGACTGTGAGCCTGTTGG AAAGCGCCCATACATCATGTCCCGGCAGCTGCAGTATGATCCCACTCCACTCACCTGGTCACAGTGCAGCAAGGAATAC ATCACACGATTTCTGGACCGAGGGTGGGGATTCTGTCTGGATGATATCCCCCAGAAAGAAGTCTTAAAGTCCCCAGTCA TTGCTCCAGGGGTGATTTATGATGTGCATCACCAGTGCCAGCTTCAGTATGGCTCCAATGCTACTTTCTGTGAAGATGT GGATAACCTTTGCCAAACACTCTGGTGCTCAGTGAAAGGCTCCTGCCGCTCTAAGCTGGATGCTGCTGCGGATGGAACT CGGTGTGGAGAAAACAAGTGGTGCTTCTCTGGTGAGTGCATTACAGTAGGCAAAACTCCAGAAGCAATCCATGGTGGAT GGGGTGTGTGGTCGCCCTGGTCCCATTGCACAAGGACCTGCGGGGCAGGAGTTCAGAGCGCAGAGAGACCATGTGATAA CCCAGAACCACAGTTTGGAGGAGACTACTGCACCGGAGAAAGGAAACGCTATCGCATGTGTAACATTAGCCCCTGTCGG AAAGGCTTGCCAACTTTTCGTCAGATGCAGTGCACTGAGTTTGACACAGTTCCCTACCAAAATGAGTTTTACCACTGGG TGCCAGTTTATAACACAGCTAACCCCTGTGAGCTTCACTGCCGCCCAATAGATCACCATTTTTCAGAGAAGATGTTGGA TGCAGTCACTGATGGTACTCCCTGCTTTGAAGGAAGGCACAGCCGAGATATCTGTATTAATGGCATGTGTAAGGCTGTT GGCTGTGATTATGAGATAAATTCCAATGCCACTGAAGACCAGTGTGGAGTTTGCCTGGGAGATGGTTCTGCCTGTCATA CAGTGAAAATGACATTTAATCAAAGTGAAGGATCTGGATATGTTGATATTGGGTTAATTCCAAAAGGTGCAAGGGGTAT CAGAGTCACAGAAGTTGCAGAAGCAGGCAACTTCCTTGCTGTGCGAAGTAAAGACCCAGAAAAATATTACCTAAATGGA GGTTTTATCATCCAGTGGAATGGTGAATATAAAGTGGCAGGAACAGTATTTCAGTATGACAGGACAGGTGATCTAGAAA ATCTGACTGCTCCAGGACCCACCAATGAATCAATATGGATTCAGCTACTCTTTCAAGAGACTAACCCTGGAATCAAGTA TGAATATACTGTTCGTAAAGAAGAAAATAATGAGAATGAGATTGGAGAGCCAGAGTATTTTTGGCAATATGGAGAGTGG ACAGCCTGCACTGTTACCTGTGGAAGAGGGGTGCGTCGCCAGATTGCCCACTGCATGCGGAAGGGAGGTGGAGTGATCA AGAACTCCTTCTGTGACCCAGCCACACAGCCAAATGGACGGCAGAAGAAGTGCTATGAAAAGGACTGTCCACCAAGATG GTGGGCAGGAGAATGGCAGAAGTGTTCAACAACGTGTGGCCCGACAGGACAGAAGAAGCGAACTGTACTTTGCATCCAA ACAGTGGGATCTGATGAGCAGGCATTGGCTGTCACAGAATGCCAGCACCTGCTTAAACCAAAGACCCATCAGTCATGCA ACAGAGATGTCTTGTGCCCATCTGACTGGACAGTGAGCAACTGGACTGAGTGCACAGTTACTTGTGGTGGTGGGATAAG GACTCGCAGTGTCACCTGTGCCAAAAATAGTCACGAGCCATGTGATAGTTCCAAAAGACCAAACTCAAAGGCCCTGTGT GGTCTCCAGCAATGTCCTTCTGCTAGAAGGTTCCTGATACCCCCACTGGCACCTAAAAGAGGAAAGATTATAATCCGAA AAACTACTAATCCCAAATGGAGTCCACCTCGCAGAATACCTGTACCAAGCCCAAGGTTCCATACGACAACAGGAGTTCC CAAGCCTGAAAGTGTAACTCCCTCTCCTACATCCTCTGGTTTGGGTAAAATCCCACAAAAAGAAGAAACAGACAACGCA ACATTAGAAAATAGTTTTGCTGTATCAACTGATGTTTACAATTATCCTGTTTTTTCTACTGAAAATAGTTTTCATCAAA ATACTACTTTGTGGCCTTTTCCTAGTAGCTTAGGTACTGAAATTATAAAGCATGCTGAAAAGATTTCTAAAAGTGAGAC AGTTTCTACTGTAGAGGGTGAGTTGCAAAGAAGTGAGGACACTCCTGTCTCTTCTTTTACGAGTAGTCCGGAAATAACT TCCAACTATGATTACTTAACTGAAGAATCTGATGATGTTGATGGGTCAACAGAAGGCAGTGAGAAACCAACTGATCGCC TTTACAGCACAGAACACAATCTGGAAATCAGAACCAGGAGCACAACCCAAGATACCAATTCTCCCATCTTTCAAAATGG GGATGTGACTTCTGATCCCCCACCCTCATCTCATCCCCAGGAACCTTCTATGCCCCCTCCCGATAGCAGAGCAGGACAA GGATTGACATTTCCAACAACAGCAAGCTCTACCAGTCTGCAAGTTGATGTGCCAATCAGAGAAGTAACTACCCAAGAAG CTGTTACAGAAGTGCCCACCACATTTGGTAATGTATTGAGAGGACGAGCTGACAGCAGAACAGAAATGAAGCTCCCTGA CAACATAACCTCCAGCACACAATTGTTAGTAAACAAGCATGCTCTCAAGAACCACATGGAAACATCTGAGAGGATTTTG ATGAATGTCACGGAAAGTAGCCTCCTAATAACATCCAGCAGTTTACCTGGTGATGCCTACTGGATAGTAGGGAACTGGA GTGAGTGCTCTACTACCTGTGGAATGGGGGCTTTCTGGAGACACGTGGAATGCAGCAGCAAGAATGTATCTCACTGTCA GCACACAAAAAAGCCGGATCATGCCAGAAAATGTTATCTGCGCCCATGTGCTAGCTGGAAAACAGGAAATTGGAGTAAG TGCTCTGCCTACTGTAATGGAGGATTCAAGACCCGAGATGTTCAGTGCATCGATGTTCGTGAGAAGCAACTTCTCAGGC CTTTTCATTGCCAATTACTTGGATATAAACCACAACTCACTACTAGTTGTAATACGGAGCCTTGCTTGCAATGGCGAGT GGAACCTTGGAATGAGTGTTCAAGGGCATGTGTTGGTGGCCAGCAAAAATGACACATCTACTTCCCAAAAGGAGGCAAT TGTGACTGGACAAAAAGACCCAATGCCATTGCATCATGTAACAGACGATCTTGTACTCAGTGGATTAATCAGACATGGG ATTTGTGCACTGTTTCCTGTGGAGGAGGCATTCAGCAAAGAACCGTGAAGTGCAGGAATATAGAAACTGATGAGACAGA AGATGACAATATGTGTGTGAAAAAGCCCAAGCCAACAGAGCATCAGCAATGCAATCAGCAAGAGTGCAGGAAGAACACA GGCCTCCCCTGCAGCAAAGACCAACTGTCGATTCACTTCTGCCAGAGGCTGAGAGGCATTGGCAAGTGCTTAGTGCCAT CAATACAGTTGCAGTGCTGCTTCACGTGTAGCCATCCCCGAATTCGTAACAAAGCAAGATACTGGGATCAGCAAGGCCT CAAACAACAATATTATACTAAATCTAGAAGAAAGTCACCTCGGAACCAAGAAAACAACAGCCAAGCTGCTCAGCACTAG CTGCTTTTTAGCTAGTTAATTTCAACAGGGCTTCAGTTTACAAGTTTTATGTGACTTCCTGTGTTTTTCTGAACCGTCC AACATAAATGGAAATCTGTGATCAAAATTGGGAAAACACATTCCTTAGGATTACCAGTCCTAATTTACTGCTTCAATTT CTTATCTATAGAAGTCCAAAATTTGTAACATAATTTGCAGTGTGCCATCAGTTAGTATTTAGGCGTGCATAGAGGCTAT AGACAAGCTTGGAATAATTCTTTTTAATTAATGTTTTGCTTGCTCTCTTCCATCTTTTTTCCAAAACCAGCTTAAAACA GTAGCACCACTTAATTCGAGTGCTCAGTGAAGGCGGATGATGGGGCAGCCAACACAGACTTGTGCTGTGGGCCAGATCC CCCTGTGCTCACTCACTTTTATGTTCCTTTTTACTTTATTTAAAGAACTGGGGTGAAGTGGCAGTGTTCCTCTCAATCA TTTGCACACGTCAGTTCTTAAAAATTTAAAAGCAGAGTTTTGTTATTACTGATGTGCAGCCTGTACAGAAAAA
Citation	Carré GA, Couty I, Hennequet-Antier C, Govoroun MS. Gene expression profiling reveals new potential players of gonad differentiation in the chicken embryo. PLoS One. 2011;6(9):e23959. Epub 2011 Sep 9.
Copyright	Creative Commons: http://creativecommons.org/licenses/by/2.5/
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_003642975.1).