GEISHA - A Chicken Embryo Gene Expression Database
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AGAP1
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1

Gene
Official SymbolAGAP1
Official Full NameArfGAP with GTPase domain, ankyrin repeat and PH domain 1
CGNC ID52113
also known asCENTG2, CENTG3, arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1|centaurin, gamma 2|centaurin, gamma 3
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_421880
PolypeptideXP_421880
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.56025
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human116987ENSG00000157985MIM:608651
Mouse347722ENSMUSG00000055013All phenotypic alleles (2):Targeted, other(2) MGI:2653690
Xenopus100485248, 431967981022
Zebrafish100148154ENSDARG00000062123ZDB-GENE-130405-1ZFIN:ZDB-GENE-130405-1
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424024
Ensembl Gene
KEGGgga:424024

Entry 1

GEISHA IdChEST1007p19Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GGACCATGAACTACCAGCAGCAGCTGGCCAACTCGGCAGCCATCCGCGCCGAGATCCAGCGCTTCGAGTCGGTGCACCC
CAACATCTACTCCATCTACGAGCTGCTGGAGCGCGTCGAGGAGCCCGTGCTGCAGAACCAGATCCGCGAGCATGTCATC
GCCATCGAGGATGCCTTTGTAAATAGCCAGGAATGGACACTAAGCCGATCTGTACCAGAGCTGAAAGTGGGGATTGTGG
GAAACCTAGCTAGTGGCAAGTCTGCACTTGTACACCGGTATCTGACTGGCACGTATGTCCAAGAGGAATCACCTGAAGG
TGGGAGATTCAAGAAAGAGATAGTAGTTGATGGACAGAGCTACCTGCTGCTGATTAGAGATGAAGGTGGCCCTCCAGAG
GCACAGTTTGCCATGTGGGTGGATGCTGTTATATTTGTCTTCAGCTTGGAAGATGAAGTTAGCTTCCAGACTGTTTACC
ACTACTACAGCCGTATGGCTAACTATCGTAACACTAGTGAAATTCCAATGGTACTGGTGGGAACGCAGGATGCTATAAG
TTCCAGTAACCCACGCGTCATAGATGATGCCAGAGCAAGGAAGCTATCAAACGACCTCAAGAGATGCACTTACTATGAA
ACCTGTGCCACCTATGGGCTCAACGTGGAGAGAGTCTTTCAAGATGTTGCTCAGAAGATCGTTGCAACAAGGAAGAAAC
AGCAGCTCTCAATTGGACCCTGCAAATCCCTACCGAACTCTCCAAGTCACTCATCTGTGTGTTCTGCCCAGGTTTCTGC
TGTACATATCAGCCAGACCAGTAATGGAGGAGGGAGTTTAAGTGATTATTCCTCCTCTGTNNCCATCACTCCAAGCACC
AGCCAGAAAGAGCTACGGATTGATGTTCCTCCCACTGGCCACACACCAACTCCTGTCCGTAAACAGTCCAAGCGCCGAT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Mesoderm
Widespread Expression
 
19-22
stage 22
Spinal Cord
Trunk Mesenchyme
 

Entry 2

GEISHA IdAGAP1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGCAGTGCCTGGAACTTTCTCTTG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGAACCTGACAAACTCTGTGCTTGCcDNA Template Length923
Forward cDNA Template Probeshow
TTCTGAATTATGCCGGTCAAGCTCTTCAGAAGAAGAGAATGAAATCCAGCCGTTCCGTTTGGTAGAGGTGAAATGTACT
GATGTGCTTAACTGTCAGTTATGGAAAGTTACCATTTCTTCTTTCTTCTCCTCTCGCTCCCACTCTCACCTCCCTCCGC
CCCTGCCTTCCGCACTTGTAGAGCCTGTGCCCAGGGACAACTGTCCCCATGGTCCCGTGCCACGTGCCGTGTCCTAGAG
AACCCACGCGCTCTCGCACGCTTCTGCTGTCCCGTCTCCATCGTTCGAGAGCTGTCACTGAAACAACTGCTTTCTCTGC
AGCCCCTTTTGCTCCTTCTCATCCCCTCGTGCTATCCAGATGTGCTGTTTCTGGATGGGACAGGGATGCACCGAAGGGT
AAAGGGAAAAGGGAAGTTATTGGACTCACAGAGCAGAGCCGTGATGGGAATGGAGGAATATGAGGCCGCGGATGTAATT
CAGGTCAGTGAATACATGAGTGAGCTCCTCAGATGATGGTGGGCATCCTTCCACTGCTGTTGTTCCGGTTGTTGTTCTT
CCTGGACAGATTTGGAGTGGCCATGAGGACGAAACGCTCGTCGGGGCAGCCGTACTGGAGGAGAACATCAATGCACTCC
TGGCTCGAAGCCTGCCTGGCATAGGCCAACGCGGTGTTCCCATGGGCATCGCGTGCCATCACGTCAACGCCGTACCANA
TCANGAGCTGCACCAACACCACGTTTCCCTTCCTGCAGGCCANGTGCAGGGCTGTGCGCCCATCNCCGTCTCCNCANGT
CTCATTCACCTCCTCCCNCGTGCCNNGGGCNAGGANCANGATGACTGTGCNCANATCTTCCTCGGCTGTANCCCTCANG
ANGTGTTGGCCAANANAAANTTCC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
stage 6
Area Opaca
Epiblast
Hensen's Node
Neural Plate/Tube
Notochord
Primitive Streak
 
7-12
stage 8
stage 9
stage 9
stage 9
stage 11
Amnion
Anterior Intestinal Portal
Area Opaca
Ectoderm
Endoderm
Forebrain
Foregut
Head Mesenchyme
Heart Tube
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Sinus Venosus
Somites
extraembryonic ectoderm
extraembryonic endoderm
extraembryonic mesoderm
 
13-18
stage 18
stage 18
stage 18
stage 18
stage 18
Dermatome
Endoderm
Eye
Forebrain
Foregut
Head Mesenchyme
Heart
Hindbrain
Leg Mesenchyme
Lung
Mesonephros
Midbrain
Myotome
Nephric Ducts
Neural Plate/Tube
Notochord
Outflow Tract
Pharyngeal Arches and Clefts
Proepicardium
Sclerotome
Sinus Venosus
Somatic Mesoderm
Splanchnic Mesoderm
Ventricles
Wing Ectoderm
Wing Mesenchyme
 
19-24
stage 20
stage 21
stage 21
stage 23
Eye
Forebrain
Foregut
Heart
Hindbrain
Leg Mesenchyme
Lung
Midbrain
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Wing Mesenchyme
 
25-27
stage 27
stage 27
stage 27
Amnion
Atria
Cardinal Veins
Ectoderm
Epicardium
Forebrain
Foregut
Head Mesenchyme
Heart
Hindbrain
Leg Mesenchyme
Lung
Mesonephros
Midbrain
Oral Pharynx
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Ventricles
Wing Ectoderm
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.56025

Mouse

EmageMGI:2653690
EurexpressMGI:2653690
MGI GXDMGI:2653690

Frog

Xenbase981022

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-130405-1
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