GEISHA - A Chicken Embryo Gene Expression Database
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KRT5
keratin 5

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolKRT5
Official Full Namekeratin 5
CGNC ID49888
also known askeratin, type II cytoskeletal 5|keratin 5 (epidermolysis bullosa simplex, Dowling-Meara/Kobner/Weber-Cockayne types)|type II alpha-keratin IIA
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001001195
PolypeptideNP_001001195
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.6561
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human3852ENSG00000186081MIM:179850MIM:148040
Mouse110308ENSMUSG00000061527All phenotypic alleles (3):Targeted, knock-out(3) MGI:96702
Xenopus100489468, 373584920458
Zebrafish797351ENSDARG00000058371ZDB-GENE-991110-23ZFIN:ZDB-GENE-991110-23
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene407779
Ensembl Gene
KEGGgga:407779

Entry 1

GEISHA IdKRT5.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerAGCATCATCGCAGAGGTGAAGG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTGGTGGTGGTCTTGGAAACGcDNA Template Length754
Forward cDNA Template Probeshow
AANAACGCAGCNCCCCGTGCTGGANCTGACCCCTCGGCTGCTGCTGGAGCTGAAGTTGCTGCCTCCACCATAGCTGTAG
CTTCCACTCCCACCTCCGAATCCTCCACCGCCGACGCTGCTGCTCATGGTGTAGCTGCCGCCGCCACCTCCCATGCCAA
GACCACTGCCCATGCTGAGACCTCCACCCATGCAGAGACCTCCACCTGTACTGAGACCTCCGCCCATGCCGCCGCCGTA
GCCCATCCCNCTGGAGCTGCTCACTACAGAGACACTCACGGCTCCAACACCCTCTCCGGCAAGCCTGCTCTCCTCGCCC
TCCAGCAGCTTCCTGTAGGTTGCAATCTCGATGTCCAGGGCCAGCTTGACGTTCATCAGCTCCTGGTACTCGCGTAGTT
GTCGGGCCAGGTCTGCCTTGGCTTTCTGCAGGGCATCCTCCAGCTCGGCCAGTTTGGATTTGGCATCTTTCAGGGCCAT
CTCTCNACGCTCCTCTGCCTCAGCGATGGCTGCTTGGAGATTGGCACACTGTTTCTTCACGCTCTCAATCTCGTTGCGC
AGCCGCTGCACCATCCGGTTGATCTCTGAGATCTCCATCTTGGTGTTCCTGAGGTCATCCCCATGGCGCCCGGCTGAGA
CCTGCAGCTCTTCGTACTTGTTCTGGTACCAAGCCTCTGCCTCAGCCCGGCTGCGGTTGGCGATGTCCTCATACTGTGC
CTTCACCTCTGGAAAGGATGCT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 5
stage 6
Area Opaca
Endoderm
Epiblast
 
7-12
stage 7
stage 8
stage 9
stage 9
stage 9
stage 10
stage 11
stage 11
Amnion
Anterior Intestinal Portal
Area Opaca
Ectoderm
Endoderm
Extraembryonic
extraembryonic ectoderm
extraembryonic endoderm
 
13-18
stage 16
stage 16
stage 17
stage 17
stage 17
Amnion
Endoderm
Splanchnic Mesoderm
 
19-24
stage 22
stage 22
stage 22
stage 22
stage 22
stage 23
stage 23
Allantois
Foregut
Hindgut
Midgut
Pharyngeal Arches and Clefts
Proepicardium
Somatic Mesoderm
Wing
 
25-26
stage 26
Allantois
Foregut
Hindgut
Pharyngeal Arches and Clefts
Sinus Venosus
Somatic Mesoderm
 

Entry 2

GEISHA IdALPHA2KERATIN.Jiang.2011Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTTGCCCTCTGCTGCTTTCCTGCTGCTCAGCTTCTATCACCAGCTCTTTCCCCCGTTCCTGTTCTTTGCGTTTCC
AACTGCACGAGCCATGAGCCGGATCTCGTACAGATCTTCCACCGGAGGGGGCATGAGGGGCTTTAGCTCAGGCTCTGCT
ATCGTGGGAGGCAGCGGTGGTGGCACGCGGAGCAGCTTCAGCTCCGTCTCTGTCTCCAGAGTTGGAGGAGGAAGAGCTG
GAGGTGGAGGAGGCTTTGGAGCTGGCGGTGGCTTCGGCAGCAGAAGTCTCTATAACCTGGGTGGAAGCAAGAGAATCTC
CCTCGGAGGGCTGCGGAGCGGAGCCGGCGTCGGATACGGCTTTGGTGGAGGAGCCGGCTTTGGTCTGGGCTATGGTGGA
GGAGCAGGAGCTGCTTTGGGCTTAGGAGGAGCTGGTGGCGGTGGTGGCTACGGGCTGGGTGGATTTGGGATGGGAGGTC
CCGGATTTGGTGGTCGTGGTGGCCCCGGGTTCCCCGTTTGCCCACCCGGTGGCATCCATGAAGTGACCGTCAACCAAAG
CCTGCTGGCACCCCTCAAGCTGGACATCGACCCTGAGATCCAGAAGGTGCGGACACAGGAGCGGGAGCAGATCAAGACC
CTCAACAACAAATTTGCCTCCTTCATCGACAAGGTGCGGTTCCTGGAGCAGCAGAACAAAGTGCTGGAGACCAAATGGA
GCCTCCTGCAAGAGCAGGGCCACACGGTCACCAGGAAGTCTCTGGAGCCCCTCTTCGAGACCTACATCAACAACCTGAG
GCGGCAGCTGGACAGCCTGATGGGGGAGAGGGGACGGCTGGACTCGGAGCTGCGGAGCATGCAGGACATGGTGGAGGAC
TTCAAGAACAAGTATGAGGATGAGATCAACCGGCGCACGGGCGCAGAGAACGAGTTCGTGGTGCTCAAGAAGGATGTGG
ACGGTGCTTACATGAACAAGGTGGAGCTGCAGGCCAAAGCAGACGGGCTGGCAGATGAGATCAACTTCCTGAGGGCTCT
CTATGAAGCGGAATTGTCTCAGATGCAGCAGCAAGTGTCTGACACCTCCGTGGTGCTGTCCATGGACAACAACCGCAGC
CTGGACCTCAACAGCATCATCGCAGAGGTGAAGGCACAGTATGAGGACATCGCCAACCGCAGCCGGGCTGAGGCAGAGG
CTTGGTACCAGAACAAGTACGAAGAGCTGCAGGTCTCAGCCGGGCGCCATGGGGATGACCTCAGGAACACCAAGATGGA
GATCTCAGAGATCAACCGGATGGTGCAGCGGCTGCGCAACGAGATTGAGAGCGTGAAGAAACAGTGTGCCAACCTCCAA
GCAGCCATCGCTGAGGCAGAGGAGCGTGGAGAGATGGCCCTGAAAGATGCCAAATCCAAACTGGCCGAGCTGGAGGATG
CCCTGCAGAAAGCCAAGGCAGACCTGGCCCGACAACTACGCGAGTACCAGGAGCTGATGAACGTCAAGCTGGCCCTGGA
CATCGAGATTGCAACCTACAGGAAGCTGCTGGAGGGCGAGGAGAGCAGGCTTGCCGGAGAGGGTGTTGGAGCCGTGAGT
GTCTCTGTAGTGAGCAGCTCCAGCGGGATGGGCTACGGCGGCGGCATGGGCGGAGGTCTCAGTACAGGTGGAGGTCTCT
GCATGGGTGGAGGTCTCAGCATGGGCAGTGGTCTTGGCATGGGAGGTGGCGGCGGCAGCTACACCATGAGCAGCAGCGT
CGGCGGTGGAGGATTCGGAGGTGGGAGTGGAAGCTACAGCTATGGTGGAGGCAGCAACTTCAGCTCCAGCAGCAGCCGA
GGGGTCAGCTCCAGCACAGGGGGCAGCGTGCGGATCGTTTCCAAGACCACCACCAGCAAAAAGACCATCAGATAAGGAT
GGTTCCAGCCAACGGTGTGTTTCCTGCCTTCCAAAAGCAACGTGCTGTCTTACCAATCAGTGCTGTACATAGCT
CitationJiang TX, Tuan TL, Wu P, Widelitz RB, Chuong CM.. From Buds to Follicles: Matrix Metalloproteinases in Developmental Tissue Remodeling during Feather Morphogenesis. Differentiation. Volume 81, Issue 5, June 2011, Pages 307–314
CopyrightCopyright © 2012 Elsevier B.V. All rights reserved.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-34
stage 34
stage 34
Feathers/Scutae
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.6561

Mouse

EmageMGI:96702
EurexpressMGI:96702
MGI GXDMGI:96702

Frog

Xenbase920458

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-991110-23
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