GEISHA - A Chicken Embryo Gene Expression Database
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CARF
calcium responsive transcription factor

Gene
Official SymbolCARF
Official Full Namecalcium responsive transcription factor
CGNC ID6426
also known asALS2CR8, calcium-responsive transcription factor|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_421946
PolypeptideXP_421946
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human79800ENSG00000138380MIM:607586
Mouse241066ENSMUSG00000026017All phenotypic alleles (2):Targeted, knock-out(2) MGI:2182269
Xenopus100494660990582
Zebrafish555728ENSDARG00000019950ZDB-GENE-070912-172ZFIN:ZDB-GENE-070912-172
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424090
Ensembl GeneENSGALG00000008474
KEGGgga:424090
GEISHA IdALS2CR8Data SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCTCCATCCACAAGCATCTGTCAC
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGCACATCGCCATTTCTCAGGGcDNA Template Length954
Complete cDNA Template Probeshow
CTCCATCCACAAGCATCTGTCACCATATCAAAAAAATCAGCAACCAGGATATTGGAAGACTCCTTTCCCATCCCTCTCC
AGCCCTTGCCAACAAATACACCTGCATGGGCACGCCGTCTCTGGAACTGTGAGAAAATTGGGGACTCATACCGCGGCTA
TTGTGTGAGCGAGACAGAATTAGAGAGTGTTCTAACGCTACACAAGCAGCAAACACAAAGTGTGTGGGGGACGCGCCAG
TCTCCAAGCCCGGCCAAACCCGCCACACGGTTGATGTGGAAATCTCAGTATGTCCCATATGATGGGATCCCCTTTGTCA
ATGCAGGAAGCAGAGCCATTGTAATGGAGTGCCAGTATGGGCCAAGGAGAAAAGGGTTCCAGTCTAAAAAAGCTGGTGA
GCAGGAACGCACTTCTGGCTATCTGTACAAAGCCACTTGTCCAGCAAGGATCTATATTAAAAAAGTTCAAAAGTTTCCA
GAGTACAGAGTTCCTACTGACCCCAAAATAGACAAGAAAATCATAAGAATGGAGCAGGAGAAAGCATTCAACATGCTGA
AGAAAAACTTGATAGAGGCTGGTGGTATCATCAGGTGGTATGTGCAGTTACCCACTCAGCAAGCCCACCAATACCATGA
AATGGAAACTTCCTGCCTCCCTTCTTCGCCCTCCCATTTTTCTGCTGCTTTTCCTGAGGAGGAGGAGGACGTGGTTAGA
GATGAGAACTGTACTCTGCCTTCCCGCCTTCATCCTCAAGTAGCAGACAAGATCCGAGATCTGGTGTCTCAAGGAATAG
AGCAGGTCTACGCAGTGAGGAAGCAACTAAGAAAGTATGTGGAAAGGGAATTATTCAAACCTGATGAAGTGCCAGAGAG
ACATAATCTATCCTTCTTTCCCACTGTGAACGACATCAAGAACCACATTCACGAAGTGCAGAAGTCCCTGAGAAATGGC
GATGTG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
Unlabeled
 
7-12
stage 8
stage 9
stage 11
Forebrain
Head Mesenchyme
Heart Tube
Hindbrain
Intermediate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Sinus Venosus
Somites
extraembryonic ectoderm
extraembryonic endoderm
 
13-18
stage 18
Unlabeled
 
19
stage 19
Unlabeled
 

Mouse

EmageMGI:2182269
EurexpressMGI:2182269
MGI GXDMGI:2182269

Frog

Xenbase990582

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070912-172
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