GEISHA - A Chicken Embryo Gene Expression Database
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ARHGEF3
Rho guanine nucleotide exchange factor 3

Gene
Official SymbolARHGEF3
Official Full NameRho guanine nucleotide exchange factor 3
CGNC ID4085
also known asrho guanine nucleotide exchange factor 3|Rho guanine nucleotide exchange factor (GEF) 3
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_001030595
PolypeptideNP_001025766
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human50650ENSG00000163947MIM:612115
Mouse71704ENSMUSG00000021895All phenotypic alleles (1):Targeted, knock-out(1) MGI:1918954
Xenopus613095, 4443545940982
Zebrafish570228ENSDARG00000013834ZDB-GENE-050208-773, ZDB-GENE-050208-773ZFIN:ZDB-GENE-050208-773, ZFIN:ZDB-GENE-050208-773
Gene Ontology
Molecular FunctionRho guanyl-nucleotide exchange factor activity
Biological Processintracellular signal transduction
Cellular Componentcytoplasm
Links to other databases
Entrez Gene416000
Ensembl GeneENSGALG00000005481
KEGGgga:416000
GEISHA IdARHGEF3.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCGTTCCATCAGTTTCCGCAG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGCCTCTGTTGTTCTTCAGTTCACCGcDNA Template Length833
Forward cDNA Template Probeshow
ACACAGAAACACGTGNAATTATCAATCAGTGGAATCCCTTTGGTCCTTCTTCAAGAATAAATAAGTCTTTCTTTGTAGT
ATTGGCATTCAGATTCACCAGTCTTTATGTTGATTTCAGCCACTATACCCTGAATTATGTTAATAGCTTCTTCAAGGTG
CTGTTGATCTGGATGATCATTTGGTGTGTGTCTCAAAATCTCTCTGAGCAGTAATGGATATTTAACCAAACGGCTTCTT
GGGATGTCAAGGAAATTCCAAAGGTCCAGTTTGCGACTAAAAGGCGACTCTAAGCAGCGCTGCAGGAAATCTTGCACTC
TGTGATCTTGTTTCTTGTGATCCAATAAGGCTTTGGCTGCTACCTGATTGCTGCAGTAGCTATCATAGGAGTTTAAGCA
TGGAAGCCAGCCCACAAGGATATGGCCAACATGTTCTGTTGATCCATCAGATTTCCTGACTTCTTGAAGTCGTCTGAGA
AGATCTTCATGTAAAGGAATTAAAGAGTCCAGTGTTCCAAAAATTTGGTTCAACTCTTGCTCTGTCATTATGGAAAGTT
TAAGCATTGGGTCATGATAAGCCTTTTTTGCTAACTTCAGATCTTCTATTAAGTCTTCTTCTCCCTTGGAAAGTTCAAA
TATAGCCTCTTGACGCTTGATTTCTTTAGACGTAAGCATATGATTGACACAAACATCAAAGGTCTCACTCCACAGTTTG
CTGTCTCTCCGCTTTGTGTTGGCAGCAGGTGTATTTCGAGACCATGGCCGTGGACTGAACAGATCCGGGCGACTGTCAC
TGCGGAAACGGAATGGAACGG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 5
Primitive Streak
Unlabeled
Low level expression
7-12
stage 9
Neural Plate/Tube
very low expression
13-18
stage 14
stage 17
Ear/Otic Placode
Eye
Hindbrain
Midbrain
Nasal Placode/Nerve
Neural Plate/Tube
Notochord
Oral Pharynx
Somites
Wing
 
19-24
stage 21
Ear/Otic Placode
Eye
Head Mesenchyme
Leg
Pharyngeal Arches and Clefts
Somites
Wing
 
25
stage 25
stage 25
Eye
Head Mesenchyme
Leg Mesenchyme
Lung
Pharyngeal Arches and Clefts
Somites
Wing Mesenchyme
 

Mouse

EmageMGI:1918954
MGI GXDMGI:1918954

Frog

Xenbase5940982

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050208-773, ZDB-GENE-050208-773
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