GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

ARHGEF6
Rac/Cdc42 guanine nucleotide exchange factor 6

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolARHGEF6
Official Full NameRac/Cdc42 guanine nucleotide exchange factor 6
CGNC ID4852
also known asrho guanine nucleotide exchange factor 6|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001006432
PolypeptideNP_001006432
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.17033
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human9459ENSG00000129675MIM:300436MIM:300267
Mouse73341ENSMUSG00000031133All phenotypic alleles (2):Targeted, knock-out(1) Targeted, other(1) MGI:1920591
Xenopus100489192949772
Zebrafish558288ENSDARG00000006683ZDB-GENE-101013-2ZFIN:ZDB-GENE-101013-2
Gene Ontology
Molecular FunctionRho guanyl-nucleotide exchange factor activity
Biological Processintracellular signal transduction, lamellipodium assembly
Cellular Componentcytoplasm, lamellipodium
Links to other databases
Entrez Gene422247
Ensembl GeneENSGALG00000006439
KEGGgga:422247
GEISHA IdARHGEF6.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerAGGAGATGACCGAGAATGGCAG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGGGATGTGATGGCTTTCAGGACGcDNA Template Length773
Forward cDNA Template Probeshow
TTCGTGACTGCATGCGCCTCCTCCATGGTGCCGCTCCAGCTCCTGCAGAAGCGTCACGTATTTGTCCAGCCTCAGGAAG
GGTTTGCTGAGGCTTGTGGTTAAGATGAGAATGCCTGGGTTGGCCGCACCCTGGCTCTCCATGAACTTCTCCAGCTCAT
CGCTGTGCTGTGTGAGGACACTGACAGCAGAAGGGTGGTTCGCGCAGTACGTCAGGTACAGGGAGCGGAACTGGGCCAT
CAGGTTCATAAAGCAGCCTCCCACACGCTGCTGGTTCTCAGGGAGCTTTGCAACATCTTCCAAGGCTTGGTTCAGGGTT
TGCTGAAATGCACTGATTTCCTCCACATTTCCCAGCAGTGAGGCGATGTCCACAGCACTGAGCTTATCATAAGACTGGA
GGGGTCTTAAGTAAGTTCCCAGAAGCGACTGTAGTTCCTTCGCATAATCTCGTTCTGTTTCCAGAATATTTTGCAACAC
CACAGGGTAATAATTCTTTGTCAGCTGAGTGCTTTCAAGTCCTTTTAATGCTTTGGGAGAGAGTGGTTTATCGGTGGAT
TTGATTTCTCTGACGTANTTGCTTGGGAACCANCCTGTTTTTCCATTCAAGGTCCCTTCCCACCANCCCCCTTCCTCAA
CCCGGGTGACATAAATAATGTCTCCTTTGTTAAC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Area Pellucida
Primitive Streak
 
4-6
stage 4
stage 5
Hensen's Node
Neural Plate/Tube
Primitive Streak
Stained for two weeks.
7-12
stage 7
stage 9
stage 12
Anterior Intestinal Portal
Blood Islands
Blood Vessels
Ear/Otic Placode
Head Mesenchyme
Headfold
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Dorsal view.
extremely low level expression
13-18
stage 13
stage 15
stage 17
Anterior/Second Heart Field
Blood Islands
Blood Vessels
Ear/Otic Placode
Eye
Gut
Head Mesenchyme
Heart
Heart Tube
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Widespread Expression
Dorsal view.
19-23
stage 22
stage 23
Anterior/Second Heart Field
Ear/Otic Placode
Eye
Foregut
Gut
Heart
Lateral Plate Mesoderm
Leg
Leg Mesenchyme
Neural Plate/Tube
Pharyngeal Arches and Clefts
Somites
Widespread Expression
Wing
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.17033

Mouse

EmageMGI:1920591
EurexpressMGI:1920591
MGI GXDMGI:1920591

Frog

Xenbase949772

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-101013-2
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona