GEISHA - A Chicken Embryo Gene Expression Database
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ATF1
activating transcription factor 1

Gene
Official SymbolATF1
Official Full Nameactivating transcription factor 1
CGNC ID4567
also known ascyclic AMP-dependent transcription factor ATF-1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNAXM_424481
PolypeptideXP_424481
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human466ENSG00000123268MIM:123803
Mouse11908, 100040260ENSMUSG00000023027MGI:1298366, MGI:3037720
Xenopus448303, 496344971676
Zebrafish325609ENSDARG00000044301ZDB-GENE-030131-4334ZFIN:ZDB-GENE-030131-4334
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene426873
Ensembl Gene
KEGGgga:426873
GEISHA IdATF1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATGGATTCTCAGGACTCATCAGACAGC
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGAACTCGGTTCTCCAGACATTTCACcDNA Template Length613
Forward cDNA Template Probeshow
AACGTTTATTTCATATTCCTTCTTCTTCCTACGGCACTCTCGAGCAGCTTCTCTGTTCTTCATCAGCCTTATCTCTCGT
TTCAGTTGTGGATCGTCTGTCTTACTGGACTGCGACGTCAGGGTGACAGGAGATGTCATGACCACAGTCTGAGGGAGGG
ACGTGGTGGTCGGCGTGGTGCGGATCTGATACGTCTGCATGTCTCCTGATGCAGTCTGCACTACCACCTGGTTGCTGGG
TACGAGTATCTGCTGGCCATCTGATGTCTGTGCATACTGCAGGATTGTTGTCCCAGGCTGAGTCCCACCAGCATTCGTC
ATGGTTAATGTCTGCAGGCCCTGCACTCCATCAGCACTGGCGCTGGCCAGCTGCAATCCATTTGCAGCAATGGCAATGT
ACTGTCCAGTGCTCGTCTGGTAGATGGGTGTGGGAACAGACATGGACGTAACAGTAGAGACCCCAGGACTTTCCTCATC
TCCTTTTCTATCCCGTGTATCTTCAGAAGAGAGATCTTTCAAAATTTTTCGATAAGATGGACGACGTGCTAAGATCCCC
CGAGCTTTCTGCGTGGAGCCTATGCTGTCTGATGAGTCCTGAGAATCCATATTCTGCGGCCGCAAGCTTTTATAAAAAN
CA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Blood Islands
Early Mesoderm
Epiblast
Mesoderm
Neural Plate/Tube
 
7-12
stage 8
stage 9
stage 10
stage 12
Blood Islands
Head Mesenchyme
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Somites
Dorsal view.
HH 8+/9-
Ventral view.
13-18
stage 15
stage 18
Head Mesenchyme
Neural Plate/Tube
Widespread Expression
 
19-24
stage 19
stage 21
stage 22
Leg Mesenchyme
Limb Buds
Neural Plate/Tube
Widespread Expression
Wing Mesenchyme
 
25
stage 25
Leg Mesenchyme
Neural Plate/Tube
Widespread Expression
Wing Mesenchyme
 

Mouse

EmageMGI:1298366, MGI:3037720
MGI GXDMGI:1298366, MGI:3037720

Frog

Xenbase971676

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-4334
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