Geisha

home

contact

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

ATF4
activating transcription factor 4

Gene

Official Symbol	ATF4
Official Full Name	activating transcription factor 4
CGNC ID	9204
also known as	cyclic AMP-dependent transcription factor ATF-4\|activating transcription factor 4 (tax-responsive enhancer element B67), activating transcription factor 4 , tax-responsive enhancer element B67
gene type	protein-coding

Genomic Map

Sequence Information

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.3457

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	468	ENSG00000128272		MIM:604064
Mouse	11911	ENSMUSG00000042406	All phenotypic alleles (5):Targeted, knock-out(4) Targeted, other(1)	MGI:88096
Xenopus	448005, 398804, 734165			983840
Zebrafish	406514, 556410	ENSDARG00000039515, ENSDARG00000038141	ZDB-GENE-040426-2340, ZDB-GENE-070928-23	ZFIN:ZDB-GENE-040426-2340, ZFIN:ZDB-GENE-070928-23

Gene Ontology

Links to other databases

GEISHA Id	K37	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show `GGCTAACTAGTTGTGGTCCTGGTCGTGCGTAGCACCTCTCTGCGCGGCGCTGACCGGAGCACACCACCCCCAAACCTCC CCCTCCCCCCCCCTAGCCGCCATGGCTCTCTAAGGGCGGCAGGGCCAGCGGCGGCATCGGCCAGTGCAGCGGGCGCAGC AGCAGCGGCGGCGGCCTCGGCACATCCCCGGCATCTGCAACCATGGCGTTTTTCAAGGCACCGCACAGCAGCACTGCTG TAGTCGACAAAAAGACCCTCTCCTTGTCTACATCCTTTGACGTCAAAGCACTAAAACCTGACCAAGATGAGCCTCTTGA ACAACGAGATGCTGTTGGGGGAGTCCTCCCCCTTCAGCCAGCCGTGTTCGGTGGCTGAGGAAAGTCTGGGACTCCTCGA TGACTACCTGGAGGTGGCCGAGCCCCTCGGTTCGCATGGGTTCTCCAGCGACAAGGCT`
Comments	stages 13, 14, 15 negative

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

7-12

stage 10

13-18

stage 16

19-22

stage 22

GEISHA Id	ATF4.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	TTATAAAAGCTTGCGGCCGCAGAATATGTTGTGGTCCTGGTCGTGCGT
Reverse cDNA Template Primer	GCTCTAGAAATTAACCCTCACTAAAGGGCGGCATCTGTAGGGAACGGG	cDNA Template Length	1049
Forward cDNA Template Probe	show GCCCTCCACAGGGGTCTAGGTTGGACGCAAGAGCCCAGGCGGCATCTGTAGGGAACGGGTTGTCATTGGGTGATCCAAG TGAATTGGTAGGACTATGTTGGGGTGTTCCCAAATAAGAGTCTGGGCTCATGCATATTCCACTATCATCGGAATGGTTC TCCTCCTCTTTCTCTGACTTGGTGATCACTACCAGAAAGGTGGGGCCCTCCTGTTTCCTTTCACCTTCCAGAACATCCA CTTCACTACCTAGTTCTAAACTAAATGAATGGTCTGGAACAGAAGTCAGAGACCCTGGGGAGAGGGGAAAAGACCAGAG GGAAGATAAAGGGGCCATGGGATCTGCTCCAATTGGAGATTCAGGGAGATTGGTGATTAGATCAGGTATGAGTGGAGGT TCTTTGTTGTGAAATTCCTGGGTGGTAGGGTTAAATAGGAGATCACACGTGTCTTCCAACGTGGCCATCAGCTCGTCTG GTGAGACGGTGGCTTCCAGATGTTCCATACCTAACAGGGCATCAAAATCAAATTCCTTCAGATCCATCTTCTCCACCAT CCACTCCATGCCAGAGAAGGCATCCTCCTGGCTGCTATCTATGGTGTTGCCTAAACTGTCCACAGCGAGCCAATTGGAG GAGACTGCCTTAGCCTTGTCGCTGGAGAACCCATGCGAACCGAGGGGCTCGGCCACCTCCAGGTAGTCATCGAGGAGTC CCAGACTTTCCTCAGCCACCGAACACGGCTGGCTGAAAGGGGAGGACTCCCCCAACAGCATCTCGTTGTTCAAGAGGCT CATCTGTTTAAGGTTTTTAAAA