GEISHA - A Chicken Embryo Gene Expression Database
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ATF6B
activating transcription factor 6 beta

Gene
Official SymbolATF6B
Official Full Nameactivating transcription factor 6 beta
CGNC ID1914
also known asATF6, cyclic AMP-dependent transcription factor ATF-6 alpha
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_422208
PolypeptideXP_422208
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.3888
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human22926ENSG00000118217MIM:605537
Mouse226641ENSMUSG00000026663All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(1) Gene trapped(1) MGI:1926157
Xenopus100498199, 496056983813
Zebrafish558071ZDB-GENE-041014-328ZFIN:ZDB-GENE-041014-328
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424365
Ensembl Gene
KEGGgga:424365
GEISHA IdATF6.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATGCCCCCGACTGCTGGAAATGG
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGTCAGGGCGTGGGGTGTCTCTGcDNA Template Length1184
Forward cDNA Template Probeshow
ACCCCCAGAGTCCGGAGGGGAGGCTGGCCCTCAATGATGTGAGGATACTGGAGCCCATGGTTTACAACCCGTAGTCAGC
CTTTTCGTCACGGAACAAAAAAAAGGACCCATGCTAAGAATATAGCCAAGGTTGAAGCTGGCTTAATGGAAAATGAAAA
TGGGCATAAAGAAAAACGTACCCTGAAGAAGCAGCTGGACTAAGTGGTGTTTAAGAACCCGAAACTCCAAATAACCTCC
CCCCAATAAAGAAACCTATGTGTGGAGGTGATTACTGGCTTTTTATAAAGATGAATTACAGTCCCCCCACTGATTTTTC
AAAAAAAATCCCAAGGGAATTTATTCCCCTGTGAGTTCCAACCACCGGAACCAAAGAACTTCCTGGAATTTTTCAACTA
CCAAGGGAGACCCCAGCCCCATCTCAAAAAAAAATCCCATCGACAACATTTTTTTGAGAAGATTAATACCATATTGAAA
TTCTGTGTCCGATAACAAAACGTTGTATGATTAATCTTCTGAAAAACCACTGTTGGTATAATTTTTACCCCCAACCACC
ACGCCTGTTGGCCCCCTAATTAACCCACAAAGAGGTTCTTAAAGGCGGAATCATTAAACTTTTCTGGGGAAAGGGGGAT
CCCAAAACTAGAAAGTGGAAAAAAAAAAAAGGTCTGAAAAAAGAAAGGTCCCATTAAATCAAGCTTTCCGAAAAGACCG
GGGGGATTCCCTGAACCTCCCCTTAAAACAAAAAGGGAGCATTTCCTTGAACCCAGAGTGGGGCAGGGCCTTTACCAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
stage 6
Extraembryonic Mesoderm
Headfold
Neural Plate/Tube
Primitive Streak
Unlabeled
no staining stages 6,7
very faint
7-12
stage 8
stage 9
stage 10
stage 11
stage 12
Anterior Intestinal Portal
Head Mesenchyme
Intermediate Mesoderm
Neural Plate/Tube
Primitive Streak
Low level expression.
13-18
stage 18
stage 18
Eye
Head Mesenchyme
Heart
Leg
Limb Buds
Neural Plate/Tube
Pharyngeal Arches and Clefts
Somites
Spinal Cord
Trunk Mesenchyme
Wing
 
19-24
stage 23
Endoderm
Eye
Somatic Mesoderm
Somites
Spinal Cord
 
25
stage 25
stage 25
Endoderm
Eye
Outflow Tract
Pharyngeal Arches and Clefts
Somites
Spinal Cord
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.3888

Mouse

EmageMGI:1926157
EurexpressMGI:1926157
MGI GXDMGI:1926157

Frog

Xenbase983813

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041014-328
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