GEISHA - A Chicken Embryo Gene Expression Database
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_

RERE
arginine-glutamic acid dipeptide repeats

Gene
Official SymbolRERE
Official Full Namearginine-glutamic acid dipeptide repeats
CGNC ID1596
also known asarginine-glutamic acid dipeptide repeats protein|arginine-glutamic acid dipeptide (RE) repeats, Atrophin-2
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNAXM_417594
PolypeptideXP_417594
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human473ENSG00000142599MIM:605226
Mouse68703ENSMUSG00000039852All phenotypic alleles (2):Chemically induced(1) Gene trapped(1) MGI:2683486
Xenopus100491498, 100036839919901
Zebrafish569081, 799473ENSDARG00000077353, ENSDARG00000075670ZDB-GENE-060718-1, ZDB-GENE-070212-3ZFIN:ZDB-GENE-060718-1, ZFIN:ZDB-GENE-070212-3
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene419435
Ensembl GeneENSGALG00000002232
KEGGgga:419435
GEISHA IdATROPHIN2.Kee.2007Data SourcePublication
Complete cDNA Template Probeshow
ATGACAGCGGACAAAGAAAAAGACAAAGACAAAGAGAAGGACAGGGATAGAGACCGGGACAAGGAGCGAGACAAGAGAG
ATAAGGTGAGGGAGAGCGAGAACTCGCGTCCTCGGCGGAGCTGCACGTTGGAAGGAGGTGCCAAGAATTATGCAGAGAG
TGACCACAGCGAAGATGAGGACAATGACAACAACAGTGCCACCACGGAGGAGTCCACAAAGAAAAGCAAAAAGAAACCG
CCCAAGAAGAAATCCCGATACGAGAGGACAGACAACGGTGAAATCACGTCTTTCATCACGGAGGATGACGTTGTGTACA
GGCCTGGAGATTGCGTATATATTGAAAGCCGCCGGCCGAATACGCCGTATTTCATCTGCAGCATTCAAGACTTCAAACT
GAGTAAACGGGACCATCTCCTTATGAATGTCAAATGGTACTATCGCCAGTCTGAAGTCCCAGATTCAGTCTATCAGCAT
TTGGTTCAGGACAGACACAATGAGAATGACTCTGGACGAGAGCTTGTTATTACAGACCCAGTTATCAAGAACCGAGAGC
TCTTCATTTCAGACTATGTCGACACTTACCACGCTGCTGCCCTCAGGGGAAAGTGTAACATCTCCCATTTCTCTGACAT
TTTTGCTGCTAGAGAGTTTAAAGCGAGAGTGGATTCATTTTTCTACATACTGGGCTATAATCCAGAGACAAGGAGGCTA
AACAGTACCCAAGGTGAAATCAGAGTTGGACCCAGTCATCAGGCTAAGCTTCCTGATCTGCAGCCCTTTCCTTCCCCAG
ATGGTGACACAGTGACACAGCATGAAGAACTTGTGTGGATGCCAGGAGTCAACGACTGTGACTTACTTATGTACCTTAG
GGCAGCAAGGAGCATGGCAGCTTTTGCAGGCATGTGTGATGGAGGATCCACAGAAGATGGTTGTGTTGCAGCCTCCCGT
GATGACACTACACTTAATGCACTCAATACACTACATGAAAGTAACTACGACGCTGGAAAAGCCCTGCAGCGCTTGGTGA
AGAAGCCTGTGCCCAAACTGATTGAGAAGTGTTGGACTGAAGATGAAGTGAAACGGTTCATTAAGGGGCTGAGGCAGTA
CGGCAAGAACTTCTTCAGGATCCGAAAGGAGTTGCTTCCGAATAAGGAGACCGGAGAACTAATCACCTTCTATTACTAT
TGGAAGAAAACCCCTGAAGCAGCAAGTTCTCGAGCCCACCGCAGGCATCGAAGACAGGCTGTGTTTCGGAGAATCAAAA
CTCGGACTGCTTCCACCCCGGTCAACACTCCCTCCAGGCCCCCCTCCAGCGAATTCTTGGATTTGAGCTCGGCCAGCGA
AGATGACTTTGACAGCGAGGACAGTGAACAGGAGCTGAAGGGCTACGCCTGCCGGCACTGCTTCACAACCACCTCCAAG
GATTGGCACCACGGCGGTCGAGAAAACATCTTACTGTGCACGGACTGTCGTATTCACTTCAAAAAGTACGGAGAGCTGC
CACCCATTGAGAAGCCCGTAGACCCTCCACCCTTTATGTTTAAGCCTGTCAAAGAGGAAGATGATGGACTTAGTGGCAA
GCATAGCATGAGGACAAGGCGGAGTCGAGGCTCGATGTCTACACTACGTAGTGGTCGTAAAAAGCAGCCAGCCAGCCCT
GATGGTAGAGCCTCACCCATTAACGAAGACATCCGTTCCAGCGGCCGCAACTCTCCCAGTGCTGCCAGCACCTCCAGTA
ATGACAGCAAAGCAGATTCAGTGAAGAAGTCCACCAAGAAAATAAAAGAAGAGGTGTCTTCTCCTCTGAAGAATTCCAA
GAGGCAGCGGGAGAAGGCAGCGTCTGACACAGAGGAGCCCGAAAGGTCCAGTGCCAAAAAATCCAAAACCCAAGAGATC
AGCAGGCCAAACTCTCCCTCGGAGGGTGAGGGTGAAGGTGAGAGCTCTGACAGCCGCAGTGTCAATGACGAAGGGAGCA
GCGACCCCAAGGACATCGACCAGGATAACCGGAGCACGTCGCCCAGCATCCCCAGCCCTCAAGACAATGAGAGCGACTC
AGATTCATCCGCTCAGCAGCAAGTGCTGCAGGCGCAGCCCCAGGTGCTGCAGGCACCCAGCAGCTCCGGCCAGGCTCCT
CCTCCCATGCCCCCCATCCCAGCCCAGCTGCCAGCACCGCTGCCGGCAGCCTCGAGTGCTTCCACGGCTCCACCGCAGG
TTTCACCACCAGCATCCCAGGCCCCCAGCCAGCCCCAGGCCCCCGCGCCGCCGCCTCCTCATTCCCACATCCAGCAAGC
CCCTGCTTTGCACCCGCAGAGACTGCCATCGCCTCACCCGCCCCTGCAGCCTCTGAATGCATCCCAGAGCCAGCCCGCC
CCAGCCTCCTCGCAGCCCCACTCGCAGCCTCCGCTGCACACTCAGCCCCAGCCTGCCCCGCACAGCTTGCAGGCACAGC
CCCTGCTGCCTCATCCCGTACCCCCCCAGCCGTTCTCGCTCCCCACGCAGTCACCTCAGTCTCAGGTTCCCCTTCAGAC
GCAAGCGCCGTCTCACTCCCACTCTGCACTGCAGGTGTCTCAGCCCGCCCTGCCGGCCGCAGCCCCTCTGCAGCAGGCC
CAGCCTCCGCGGGAGCAGCCGCTGCCCCCTGCGCCCATGGCCATGCCTCACATCAAGCCTCCCCCCACCACCCCCATCC
CGCAGCTTCCCACCCCTCCATCCCACAAGCACCCTCCTCATCTCTCCGGCCCTTCTCCGTTCTCGATGAACTCCAACCT
GCCTCCGCCGCCGGCTCTAAAACCCCTGAGCTCCCTCTCCACTCACCACCCTCCATCCGCACACCCTCCTCCCCTGCAG
CTGATGCCCCAGAGCCAGCCGCTGCAGTCCTCGCAAGCCCAGCCTCCCGTCCTGACCCAGAGTCAGAGCCTTCCCCCAT
CTGCCTCTCACCCCCCGTCCGGACTCCACCAGGTATCCTCGCAGCCCCCCTTTTCTCAGCATCCCTTTGTCCCCGGAGC
CCCACCGTCCATCACCTCTCCTTCGTGCCCCTCCACTTCCACGCCGCCTGCCGTGCCCGGCATCCCTCTTCAGACCTCC
ATCTCCACATCAGCAGCTTCTAGTGGGAGCGTGCCAGTGGTGACGTCCTGCACGCTGCCACCTATCCAGATCAAAGAGG
AGGTCCCCGATGAGGCTGAGGAACCAGAAAGCCCTCCGCCTCCACCACGGAGTCCGTCGCCAGAACCAACCGTGGTGGA
TACACCGAGTCATGCCAGCCAGTCCGCCAGGTTCTATAAGCACCTGGACCGTGGCTACAATTCGTGCTCAAGAGCAGAT
TTGTACTTCATGCCTCTGGCAGGATCCAAACTGGCCAAGAAGAGAGAAGAGGCCATTGAAAAGGCCAAAAGGGAAGCGG
AGCAGAAAGCCAGAGAAGAGAGGGAGAGAGAGAAAGAAAAAGAGAAGGAAAGAGAGAGGGAACGTGAGCGTGAAAGAGA
AGCAGAAAGAGCTGCGAAGGTATCCAGCTCCTCCCACGAAGGCCGCCTCGGGGAGTCGCAGCTCAGCGGGCCGGCACAC
ATGAGGCCTTCGTTTGAGCCCCCGCCAACGACCATCGCTGCCGTCCCGCCCTACATCGGCCCGGACACACCTGCCCTGC
GGACGCTGAGCGAGTACGCCCGTCCTCACGTCATGTCTCCAACGAACCGGAACCATCCCTTCTTCGTCCCCCTGAACCC
CACCGACCCGCTCCTGGCCTACCACATGCCCGGCCTCTACAACGTGGACCCCACCATCCGGGAACGGGAGCTGCGGGAG
CGGGAGATCCGGGAGCGAGAGATCCGGGAGAGGGAGCTGAGGGAGAGGATGAAGCCCGGCTTCGAGGTGAAGCCCCCGG
AGCTCGACGCGCTGCACCCGGCCACGAACCCCATGGAGCATTTTGCCAGGCACGGCGCACTGACTATTCCCCCAACGGC
AGGACCTCACCCGTTCGCTTCCTTCCACCCGGGTTTGAACCCGCTGGAAAGAGAGAGACTCGCGCTGGCAGGCCCGCAG
TTACGGCCTGAAATGAGCTACCCTGACAGACTGGCAGCTGAGAGGATACACGCGGAGCGGATGGCATCGCTGACAAACG
ACCCGTTGGCACGGCTCCAGATGTTCAACGTCACGCCCCACCATCACCAACACTCGCACATACATTCGCATTTACACCT
CCATCAGCAGGATCCCCTCCATCAAGGTTCCGCAGGACCTGTTCACCCGCTGGTGGATCCCTTAGCAGCTGGACCCCAT
TTGGCGCGCTTCCCCTACCCACCTGGGACCATCCCCAACCCATTGCTAGGACAGCCACCTCATGAGCATGAAATGCTCC
GACATCCAGTCTTTGGTACCCCTTACCCTCGGGATCTGCCTGGTGCCATTCCACCTCCGATGTCCGCAGCCCACCAGCT
GCAGGCCATGCACGCCCAGTCAGCAGAGCTGCAGAGACTGGCAATGGAGCAGCAGTGGTTGCACGGGCATCCTCACATG
CATGGTGGTCATCTACCAAGTCAGGAAGATTATTACAGTCGGCTGAAGAAAGAAGGCGACAAACAGTTGTAATAAATTA
TTTATTTGTAATGCTGGCTATGGAAACCCCAGTCCTTGGGAAGGAGTGGAACATTTTTACATACAATAAGAGCTACAAA
AGGAAAAGAATATCTTATAAAGATTTCTTTATATATTTAAAACAGAAGCGACCACCCAACAAGTAGAGACTTATCAGCA
TAGCGTTCATTTGTAGAGAAGATTTCTCAAGACTGGTGTGGGTCTCCCTGCATGACAACGTATTCAGAAGCCTATTGAA
GATACAGGACTGCGTGGAGTATTCAGAGAACTTCCTGCAACCTTGGTTTTTTTTTCTTCCTAGTTTGTTTTTGAGTAGG
TGCTAGGATCGGGTTCACAACACGAGTCACTGTGCGTGAAGGGACACTCAGTGCATCTATAGCTACTGCAGGAAAAAGC
AAGGATTGCAAGTAGGTGACATAACAAGCTCTGAATCCAAGTGCTATAATAATAATAATAATAATAATAAAAAAATCTA
CTTTTATTTTAATACATTGTAGGAAATCTTCATAATTTTCAAGAGAGCTCAGTTCTGCAGCATGGCTTTTTAAGTCTGT
AAATAACTTTTTTGGGTAGAGGGGAGAAACGAAACAAAAGGAAACTCCAGAAACGTTTATGTTGATTTTCAGTAACATC
ACACGTTGTGAATTCCTACCTGGTATTGACAGAATACAGAGTTGATTTTTTAATAAAAAAAAAATATATATAGTTATCC
CTTTAATTAAAGGGAACAATGGGTATCAATAATTTCAAATGGGTAAAAGCTTGAAATTTGGCTTGTTATCAACAATAAG
CATTAAAGGGAGATGCAGGGATAATGTTGCAAACGACTGTTTCTGTTCTTGGTTTTTGTTTCTTCTGTTAGTGTGACAT
CTCTGTTCTGCAGCTGATTTCTGTTGAGTTGGGTTTCTCAGCAGTGCAGGTGTCCCTTGGAGCTCACTGACCCTACTTC
AGGGGTTCGTCTTCAGCATGGCCATCATACACCTCTTTCCTTTTACCTTTTGCAGCTGAAATCTAACGCCCCTGGCTGT
AGGCTATCCCTGACGGGATAACCAAAGAGTTCAAAGAGAGAACCCATTCTGAAATCTCTATTTTCAAATGCTCCATGGC
TCAAAGCAGTGCAGCCAGAACTTCATACCGTGCATCCTTTTGGAGGTTTGCTCTCCCTGGCCTCTTGTGTTTGATGCAT
TTTTGAGTAAGGAGGACCGGACAACTCAGTGTTCTTAAAGCTGTTTTGCAAAGAGCAGTCTGCATTTCGCTGGGACTGT
TTGAATTCTGTTTTTATAAGCAAAAACTTTTTAGCTGCCGCAGACGTTCTGTATCTCAGGAACTTACTGGTTTGGGCTT
CAAATAATACATGGACAGTAATATTTACTGCCTCCAACACGACAGGTCCGTGCAGAACTCCTGTTGGTAGTTCCCTCGT
GGGCAGTGAGAGGAGAGGAGCACGCAGGAGGCCAGGGAGCATCATTTTAGAGACAGCTCTGCTTGCTGCCCAGGCAGAA
AGGTTTTATGTGTTGTTACTGTTCGGCCATACGTTTGGTTGGTTTGGTTTTTTGGTTGTTCTCTTTATTTTATTTTTTT
TTGCCAGGGCAGAGGGTGGTGCAGCCAATGGACATCTGAACCTGCTGGCCATCTGCTTCCCCATGTCCTCTCTCCACTC
ATGAGCACTCTCTCTCTGCCGTCGTAGACTGTTATAAATGTGATGGTTGTGTCATAGGACTGTACTGAGCCACGTGCGC
TGAAGCTGTGGTTAATGACACGTTGTGATGGAAGGCATGCACAGTGCTTGACCCACCGCATGGGGCTCAAACCAACCTC
AGCATCAGTGCCCAGAGGTGAACGTTACTGTAACACCCACTGACAAATTCAAACGTTGCACCGGGGTATTCTAGGCCCA
CTTAGAGCAAGAATATAAGGGAGAGAGAGGAGGCTGATTTCAGTTGCTGACCTTTTGTGTCCTCTGTTGCAGATTTCGC
AATGCTAAGGAACTGCAGTAGCATTTAATCAGTTCCATGCCCTGTGCACGAGCTCTGGAGATGTTAGCAGGAGCAGCCA
GTGCTGGCATGTGGAGGCTGTGAGGTCAGTGTGGCACCCAGCATGCTGGGCTTCCTTTGGGCACTGCTTGGCTGGCATC
TGAAAGCGAATTACTCCTTTCTTCTGAGTAACGCTTTCACCTTTTGCTTTCGACTTTGTTTTTAGACAAACACCAATAT
TTTGTGGGGGTTTTTTGTGCCCATCACTCAGCAAAAAAAGCACTGAAACTTCCACGTGAGACCTGTGGTTAACTACAGC
TTTACTCGCAGTGGCTCTCGAAGCCATCCTGGTGTTGGATGCCCCGTTCAAACAGCCCAGACCTCCTGGTTTTCTTTCA
GAAATCCCTCTTTTGTTCTTCCTCGGTTTGGAAAGGTTTCAGTTTTCCGTTTTGCTTTGTGTTTTTGAAGCCTCTCTTG
TTCTGTGTCGTCATGGTTGAGCTTGTTTCACCGCACCGTTACAGCAGAGTGTACATTCTGACTGCTACGTTTATATATA
TCTTGAAGCTTAATGTATATATGAGTAGTTTGCCATGGGATAACACAGTGTAAACAGAGTAGAAACCCAGAAATCGTGA
CTTCTGTGTTCTCTCCATTTGAGTATTTTGTAATTTTTTTGAGATATTTGTGGACATAAATAAAACCGAGCTACACTAC
AGC
CitationYun Kee, Byung Joon Hwang, Paul W. Sternberg, Marianne Bronner-Fraser. Evolutionary conservation of cell migration genes: from nematode neurons to vertebrate neural crest. Genes Dev. 2007 February 15; 21(4): 391–396.
CopyrightCopyright © 2007, Cold Spring Harbor Laboratory Press
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_417594.3).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-9
stage 9
stage 9
Lateral Plate Mesoderm
Midbrain
Neural Crest
Neural Plate/Tube
Somites
 

Mouse

EmageMGI:2683486
MGI GXDMGI:2683486

Frog

Xenbase919901

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-060718-1, ZDB-GENE-070212-3
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