GEISHA - A Chicken Embryo Gene Expression Database
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ACAN
aggrecan

Gene
Official SymbolACAN
Official Full Nameaggrecan
CGNC ID5079
also known asAGC1, aggrecan core protein|CSPCP|aggrecan 1|aggrecan chondroitin sulfate CS2 domain|cartilage-specific proteoglycan core protein|chondroitin sulfate proteoglycan core protein|proteoglycan core protein
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204955
PolypeptideNP_990286
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.3977
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse11595ENSMUSG00000030607All phenotypic alleles (7):Spontaneous(2) Targeted, other(5) MGI:99602
Xenopus100491091921493
Zebrafish559593, 497505ENSDARG00000045799ZDB-GENE-100422-16, ZDB-GENE-050208-221, ZDB-GENE-100422-16ZFIN:ZDB-GENE-100422-16, ZFIN:ZDB-GENE-050208-221, ZFIN:ZDB-GENE-100422-16
Gene Ontology
Molecular Functioncalcium ion binding, carbohydrate binding, hyaluronic acid binding
Biological Processcell adhesion
Cellular Componentproteinaceous extracellular matrix
Links to other databases
Entrez Gene395798
Ensembl GeneENSGALG00000006725
KEGGgga:395798

Entry 1

GEISHA IdACAN.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGACCATCTGCTTTTCCTCCAGC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGAGACCTCACCACTTCCATCAACACcDNA Template Length960
Forward cDNA Template Probeshow
CCCAGAAGGTAAGGCCGGCCTCACGNTCCACCGGGGGGCCGGCCTCACCCTCGGGGGGTGGCCTCCAGAATGGGTTCCC
CACTGTATGTCCAGNTCCGGGAGGGAAACCCGCGTGAGCTCAGGCACCCCAAAAGGCTCTCCACTGAGTNTCAGGCAGN
CCAGAATGTTCTCCACTGAGCTCAGTCACCCCGGAATGCTCNCCANTGACACTCAGGCACCTCAAAAGGCTCTCCACTG
AGCCCAGGCACCCCNGAATGCTCCCCACTGAGCTCGGGCACCCCGGATTGCTCCCCACTGGTTTCAGCTCCCNAGGGCA
GCNCTCTNGCCCCACTGCTGTCCCACTCCGCAGACGGAAACCCTGACAGCTCTTCTTCACCACTGACTCCAATTGATCC
TTTTCCCTCCTCTTGCCGTCCCGGTGCTGCCGTTACAACCTCCACCAAAGTGGAATCCACGAGGGAGATGGTGGGAAAA
CCANAGGCGAGCCCACTTTCCTCTCCAGATGGCAGGCCACTGATAAGCTCANTGCCAGAGATTTCTCCACTAAATCCAN
AATGCANACCACTGCTTTCANCTCCANATGGCATTCCACTAACTTCTGGTATCCTCNAAACANACACCGTTACCTCTTC
CTCTGCANAAGGNAANCCNCTGATATCAACAATGCCANAAGGNAACCCGCTCANATCCCCTGANGGAAGGCCACTTTCT
CCANGTACA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 7
stage 7
stage 9
stage 9
Blood Islands
Extraembryonic Mesoderm
Forebrain
Head Mesenchyme
Heart
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Sinus Venosus
Somites
Unlabeled
No expression through stage 7
13-18
stage 13
Ear/Otic Placode
Forebrain
Foregut
Heart
Hindbrain
Intermediate Mesoderm
Midbrain
Neural Plate/Tube
Somatic Mesoderm
 
19-24
stage 19
stage 19
stage 19
stage 23
stage 24
stage 24
Cranial Ganglia
Ear/Otic Placode
Head Mesenchyme
Heart
Nephric Ducts
Notochord
Outflow Tract
Pharyngeal Arches and Clefts
Somites
Wing AER
 
25-26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
Cranial Ganglia
Foregut
Head Mesenchyme
Heart
Hindbrain
Isthmus/MHB
Leg Bones
Leg Mesenchyme
Neural Plate/Tube
Notochord
Oral Pharynx
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Ganglia and Nerves
Vertebrae
Wing Bones
Wing Mesenchyme
atrio-ventricular cushion
cardiac cushion

Entry 2

GEISHA Idaggrecan.zhao.2007Data SourcePublication
Complete cDNA Template Probeshow
CTTACTCTTCAAGCCTGCTGCTGCTGCCACTGCCTGAAAGGACCTGAAATACCACACAGGGAATTGTGATTTCTTCTGG
GGAACTGGGAAAAAAAAAAAAAAAAAAGGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGA
AGTGGCAAGCTCTTTCCGTCTTGAGCACCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAG
CACTGCACTGAACTGTTAAAGGTAAACTATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCT
GCCTCCGCAGAGCTCTCAGACAGTAGCGATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGG
GAAGCTCCCTGAACATCCCCTGCTATTTCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAA
ATGGAGCAAGCTTTCCAATGGAACAGAGATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTAC
AGAGAGGTGATCTCCTTGCCCAATTACCCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACC
ACACTGGGATTTATCGCTGTGAAGTGATGTATGGGATTGAGGACAGACAATACACCATAGAGGTCCTGGTGAAAGGCGT
CGTGTTCCACTACAGAGCAATCTCCACAAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGT
GCTGTCATTGCCACCCCTGAGCAGCTGCAGGCTGCTTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTG
ACCAGACTGTCAGGTACCCCATCCATCTGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAAC
CTACGGTGTCCGTGAGACAGATGAAACCTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCC
ACCTCCCCCGAGAAGTTCACCTTCCAGGAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCG
AGCTGTACTTGGCCTGGAAGGATGGCATGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGTTACCCCAT
TTCCAGAGCACGGCCCAATTGTGGAGGGAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGG
TACCCTCACCCCAGCTCACGCTACGATGCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCA
CTGACGAGGTTGGGACCGAGCTGGGCAGTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCC
ACGCAATGTCACAGAAGAGGAGGCCCGTGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACATCCACCGCCACTGAG
CTGTATGAGGCCTTCACCGTCCTGCCTGACCTGTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGA
ACGTGACCAGAGAGGAGATCACAGGGATATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCAC
CACCGGAATGGCAGAGGTGAGCTCAGTGGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCA
TTCACCATAGAAGATCATCTCGTGCAAGTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCA
CTGGTGTGGTGTTCCACTACCGTGCTGCCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGA
GAACAATGCCGTTATTGCCACTCCCGAGCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGG
CTGCGGGACCAGACGGTCAGGTATCCCATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTG
TGCGGTCATACGGCATGCGCCCGGCCTCAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTT
TTTTGCCACCCAGCCAGAGCAGTTCACCTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCT
GCTGGGCAACTCCACGCTGCCTGGAAGCAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGT
ACCCCATTGTGCGCCCCCGACCTGCCTGCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGAC
GGGCTTCCCTGACCCTCTGTCACGGCATCACGCTTTCTGCTTCAGAGCTCTGCCATCTGTAGTGGAGGAGGGGGTGACC
TCACTCTTTGAAGAAGAGGTGATGGTAACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTG
TGGAGACAGAGCTTTCCTCTGAGCCTGAGAGTCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCT
CTCAGCGAGACCATCTGCTTTTCCTCCAGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTG
TCCGGAGAGTTCCCTGAGTCTGGAGAGCACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAG
AACCAACTTCCGTAGGTTTTGAACTGAGTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCA
GAGCAGTGGCTTTGTACCTGGAGAAAGTGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATC
AGCGGCTTGCCTTCTGCAGAGGAAGAGGTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAG
CTGAAAGCAGTGGTCTGCATTCTGGATTTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGA
GGAAAGTGGGCTCGCCTCTGGTTTTCCCACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCG
GGACGGCAAGAGGAGGGAAAAGGATCAATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGG
ACAGCAGTGGGGCCAGAGGGCTGCCCTCGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGA
GCATTCCGGGGTGCCTGGGCTCAGTGGAGAGGCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAG
CTCAGTGGAGAACATTCTGGGCTGCCTGAGCTCAGTGGTGTGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCG
GACTGGACATCAGTGGGGAACCATCTGGAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGT
TGATGGAAGTGGTGAGGTCTCAGGCGTTACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCCGTCAGTTGCAGAA
GCAGAAGCAAAAGAAATTCTAGAGATCAGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATG
TCAGCGGTCAGCCTTCGGGACACATAGGCTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAGGCGG
AGCGGTTGAGAGCAGTGGAGAAGCCTCTGGGGTTGAAGTCACCAGTGGCCTCGCGTCTGGAGAGGAAAGTGGGCTCACC
TCAGGCTTTCCCACCGTGTCTCTCGTGGATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTTG
GAGAAGGACCATCTGGGATGATAGAAATCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAGGGGTCTGGAGC
TGTGCAGTCTAGTGGGCTTCCTTCAGGAACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGAC
ATTTCTGGAGCCACAGATCTAAGCGGACAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAG
TCACTTTAGTCACATCCGATTTAGTAGAAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGT
GACGTTTCCCTATGTCTTTGGGCCAAGTGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGT
GGTATAGAAACATCAACAGCTTATGAAATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAG
ATCAAGAAATCAGTGGGGAAGCATCTGCATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGA
AACATCTGCATACCCTGAGATTAGCACAGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAA
ATTAGCACAGAAACATCCACAATACAAGAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCA
CCTTTCAAGAAATCAGTGGGGAAACGTCCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGG
CGAAACGTCTGCGTTTGCTGAGATTACCATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCC
GAAATTAGCATAGAAACATCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCTGAAATTAGCATAGAAACAT
CCACAGTCCATGAAATCAGTGGGGAAAGTTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCG
GGGTGAAACATCTGCGTTCCCTGAGATTACCACAGAAGCCTCCACCATTCAAGAGATCAGTGGAGAAACATCTGCATTT
CCTGAAATTAGCATAGAAACTTCCACCGTCCGTGAAATCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAA
CATCCACGAGTCAAGAAGCCCGGGGTGAAACATCTGCATTGCCTGAGATTACCATAGAGACATCCACTGTCCATGAAAC
CAGTGGGGAAGCGTCTGCCTTTCCTGAAATTAGCATAGAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCC
TACCCTGAGGTTAGCATAGAGGCATCCACAACTCAAGAAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAG
AGACATCCACAAGTCAGGAAGCCCGCGGTGAAACATCTGCCTTTCCTGAGATTGGGATAGAGACATCCACAGCCCACGA
AGGCAGTGGGGAAACTCCTGGGCTGCCTGCTGTTAGCACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCC
GGTGCTCCTGAGAAGGAAACTCCCGACACAACATCACATCTGATCACAGGCGTTTCAGGGGAAACCTCTGTCCCAGATG
CTGTAATCAGTACCAGTGCTCCAGATGTTGAACTAGCGCAGGAACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGA
GCCCTCCACTCCTGCGGCATCTGGACAAGAGACAGAAACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCT
ACTGCTGCCCTGCATCCAGCCTCCCAAGAAGCAGTAGATGCACTGGGACCCACTACAGAAGACACTGATGAGTGCCACT
CAAGCCCCTGTCTGAATGGAGCTACCTGCGTTGATGGCATCGACTCTTTCAAATGCTTATGCCTTCCCAGCTACGGAGG
GGACCTGTGTGAGATCGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCACTTTGAA
GAGAGGGAGACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACTCCAGAGG
AACAAGAATTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATGATTTCCG
CTGGTCTGATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTTCGCGGGCGAGGAC
TGCGTTGTGATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACGTGCAAGA
AGGGAACAGTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCTATGAGAT
CAACTCCCTGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACCCAACGGG
CACTGGGAGGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACACCGGCTATACAAGAGGAGCCCCCGGAGCC
GGTTGAGACCCGGTGTCGTGCACAGACCCACCCATTAGAG
CitationZhao B, Etter L, Hinton RB Jr, Benson DW. BMP and FGF regulatory pathways in semilunar valve precursor cells. Dev Dyn. 2007 Apr;236(4):971-80.
CopyrightCopyright © 2007 Wiley-Liss, Inc.
CommentsAuthors state: "A plasmid for the aggrecan probe was generously provided by Drs. J. Lincoln and K. Yutzey" We have linked to the Yutzey chick aggrecan cDNA in genbank, Acc.# U78555.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 30
Valves
 
31-37
stage 37
Valves
 

Entry 3

GEISHA IdAggrecan.Shelton.2007Data SourcePublication
Complete cDNA Template Probeshow
AAAAAAAAAAAAAGGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGAAGTGGCAAGCTCTT
TCCGTCTTGAGCACCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAGCACTGCACTGAACT
GTTAAAGGTAAACTATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCTGCCTCCGCAGAGCT
CTCAGACAGTAGCGATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGGGAAGCTCCCTGAAC
ATCCCCTGCTATTTCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAAATGGAGCAAGCTTT
CCAATGGAACAGAGATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTACAGAGAGGTGATCTC
CTTGCCCAATTACCCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACCACACTGGGATTTAT
CGCTGTGAAGTGATGTATGGGATTGAGGACAGACAAGACACCATAGAGGTCCTGGTGAAAGGCGTCGTGTTCCACTACA
GAGCAATCTCCACAAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGTGCTGTCATTGCCAC
CCCTGAGCAGCTGCAGGCTGCCTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTGATCAGACTGTCAGG
TACCCCATCCATCTGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAACCTACGGTGTCCGTG
AGACAGATGAAACCTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCCACCTCCCCCGAGAA
GTTCACCTTCCAGGAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCGAGCTGTACTTGGCC
TGGAAGGATGGCATGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGCTACCCCATTTCCAGAGCACGGC
CCAATTGTGGAGGGAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGGTACCCTCACCCCAG
CTCACGCTACGATGCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCACTGACGAGGTTGGG
ACTGAGCTGGGCAGTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCCACGCAATGTCACAG
AAGAGGAGGCCCGTGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACAGCCACCGCCACTGAGCTGTATGAGGCCTT
CACCGTCCTGCCTGACCTCTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGAACGTGACCAGAGAG
GAGATCACAGGGATATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCACCACCGGAATGGCAG
AGGTGAGCTCAGTGGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCATTCACCATAGAAGA
TCATCTCGTGCAAGTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCACTGGTGTGGTGTTC
CACTACCGTGCTGCCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGAGAACAATGCCGTTA
TTGCCACTCCCGAGCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGGCTGCGGGACCAGAC
GGTCAGGTATCCCATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTGTGCGGTCATACGGC
ATGCGCCCGGCCTCAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTTTTTTGCCACCCAGC
CAGAGCAGTTCACCTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCTGCTGGGCAACTCCA
CGCTGCCTGGAAGCAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGTACCCCATTGTGAGC
CCCCGACCTGCCTGCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGACGGGCTTTCCTGACC
CTCTGTCACGGCATCACGCTTTCTGCTTCAGAGCTCTGCCATCCGTAGTGGAGGAGGGGGTGACCTCACTCTTTGAAGA
AGAGGTGATGGTAACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTGTGGAGACAGAGCTT
TCCTCTGAGCCTGAGAATCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCTCTCAGCGAGACCAT
CTGCTTTTCCTCCAGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTGTCCGGAGAGTTCCC
TGAGTCTGGAGAGCACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAGAACCAACTTCCGTA
GGTTTTGAACTGAGTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCAGAGCAGTGGCTTTG
TACCTGGAGAAAGTGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATCAGCGGCTTGCCTTC
TGCAGAGGAAGAGGTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAGCTGAAAGCAGTGGT
CTGCATTCTGGATTTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGAGGAAAGTGGGCTCG
CCTCTGGTTTTCCCACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCGGGACGGCAAGAGGA
GGGAAAAGGATCAATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGGACAGCAGTGGGGCC
AGAGGGCTGCCCTCGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGAGCATTCCGGGGTGC
CTGGGCTCAGTGGAGAGCCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAGCTCAGTGGGGAGCA
TTCTGGGCTTCCTGAGCTCAGTGGAGAGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCGGACTGGACATCAGT
GGGGAACCATCTGGAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGTTGATGGAAGTGGTG
AGGTCTCAGGCGTTACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCAGTCAGTTGCAGAAGCAGAAGCAAAAGA
AATTCTAGAGATCAGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATGTCAGCGGTCAGCCT
TCGGGACACATAGACTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAAGCGGAGCGGTTGAGAGCA
GTGGAGAAGCCTCTGGGGTTGAAGTCACCAGTGTCCTCGCGTCTGGAGAGGAAAGTGGGCTCACCTCAGGCTTTCCCAC
CGTGTCTCTCGTGGATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTGGGAGAAGGACCATCT
GGGATGATAGAAATCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAAGGGTCTGGAGCTGTGCAGTCTAGTG
GGCTTCCTTCAGGAACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGACATTTCTGGAGCCAC
AGATCTAAGCGGACAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAGTCACTTTAGTCACA
TCCGATTTAGTAGAAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGTGACGTTTCCCTATG
TCTTTGGGCCAAGTGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGTGGTATAGAAACATC
AGCAGCTTATGAAATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAGATCAAGAAATCAGT
GGGGAAGCATCTGCATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGAAACATCTGCATACC
CTGAGATTAGCACAGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAAATTAGCACAGAAAC
ATCCACAATACAAGAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCACCTTTCAAGAAATC
AGTGGGGAAACGTCCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGGCGAAACGTCTGCGT
TTCCCGAGATTACCATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCCGAAATTAGCATAGA
AACATCCACAGTCCATGAAATCATGGAGAAACATCTGCATTTCCTGAAATTAGCATAGCAACTTCCACCGTCCGTGAAA
TCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGGGGTGAAACATCTGC
ATTGCCTGAGATTACCGTAGAGACATCCACTGTCCATGAAACCAGTGGGGAAGCGTCTGCCTTTCCTGAAATTAGCATA
GAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCCTACCCTGAGGTTAGCATAGAGGCATCCACAACTCAAG
AAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAGAGACATCCACAAGTCAGGAAGCCCGCGGTGAAACATC
TGCCTTTCCTGAGATTGGCATAGAGACATCCACAGCCCACGAAGGCAGTGGGGAAACTCCTGGGCTGCCTGCTGTTAGC
ACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCCGGTGCTCCTGAGAAGGAAACTCCCGACACAACATCAC
ATCTGATCACGGGCGTTTCAGGGGAAACCTCTGTCCCAGATGCTGTAATCAGTACCAGTGCTCCAGATGTTGAACTAGC
GCAGGGACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGAGCCCTCCACTCCTGCGGCATCTGGACAAGAGACAGAA
ACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCTACTGCTGCCCTGCATCCAGCCTCCCAAGAAGCAGTAG
ATGCACTGGGACCCACGACAGAAGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCA
CTTTGAAGAGAGGGAGACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACT
CCAGAGGAACAAGAATTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATG
ATTTCCGCTGGTCTGATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTCCGCGGG
CGAGGACTGCGTTGTGATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACG
TGCAAGAAGGGAACAGTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCT
ATGAGATCAACTCCCTGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACC
CAACGGGCACTGGGAGGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACGCCGGCTATACAAGAGGAGCCCC
CGGAGCCGGTTGAGACCCGGTGTCGTGCACAGACCCACCCATTAGAGCGGGGCGAGGGGTGAGCAGAGAGAGAAAAGAG
AGATTTTTACGGAGCACTTCTATTAACAGAGTCAATTTCTTCTTCTTGTTGTTGC
CitationShelton EL, Yutzey KE. Tbx20 regulation of endocardial cushion cell proliferation and extrcellular matrix gene epression. Dev Biol. 2007 Feb 1;302(1):267-80.
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsThe chicken aggrecan sequence (GenBank accession number U78555) was amplified from HH stage 34 wing cDNA using the previously reported primers 5′-CTGCGTTCCCTGAGATTAC-3′ and 5′-TTGCCAGGTCGATCTCAC-3′. We were unable to determine the probe sequence using this information. The sequence listed is U78555.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 25
Valves
 
31-34
stage 34
Valves
 

Entry 4

GEISHA IdAGC.Domowicz.2008Data SourcePublication
Complete cDNA Template Probeshow
AAAAAAAAAAAAAGGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGAAGTGGCAAGCTCTT
TCCGTCTTGAGCACCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAGCACTGCACTGAACT
GTTAAAGGTAAACTATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCTGCCTCCGCAGAGCT
CTCAGACAGTAGCGATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGGGAAGCTCCCTGAAC
ATCCCCTGCTATTTCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAAATGGAGCAAGCTTT
CCAATGGAACAGAGATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTACAGAGAGGTGATCTC
CTTGCCCAATTACCCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACCACACTGGGATTTAT
CGCTGTGAAGTGATGTATGGGATTGAGGACAGACAAGACACCATAGAGGTCCTGGTGAAAGGCGTCGTGTTCCACTACA
GAGCAATCTCCACAAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGTGCTGTCATTGCCAC
CCCTGAGCAGCTGCAGGCTGCCTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTGATCAGACTGTCAGG
TACCCCATCCATCTGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAACCTACGGTGTCCGTG
AGACAGATGAAACCTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCCACCTCCCCCGAGAA
GTTCACCTTCCAGGAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCGAGCTGTACTTGGCC
TGGAAGGATGGCATGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGCTACCCCATTTCCAGAGCACGGC
CCAATTGTGGAGGGAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGGTACCCTCACCCCAG
CTCACGCTACGATGCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCACTGACGAGGTTGGG
ACTGAGCTGGGCAGTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCCACGCAATGTCACAG
AAGAGGAGGCCCGTGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACAGCCACCGCCACTGAGCTGTATGAGGCCTT
CACCGTCCTGCCTGACCTCTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGAACGTGACCAGAGAG
GAGATCACAGGGATATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCACCACCGGAATGGCAG
AGGTGAGCTCAGTGGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCATTCACCATAGAAGA
TCATCTCGTGCAAGTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCACTGGTGTGGTGTTC
CACTACCGTGCTGCCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGAGAACAATGCCGTTA
TTGCCACTCCCGAGCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGGCTGCGGGACCAGAC
GGTCAGGTATCCCATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTGTGCGGTCATACGGC
ATGCGCCCGGCCTCAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTTTTTTGCCACCCAGC
CAGAGCAGTTCACCTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCTGCTGGGCAACTCCA
CGCTGCCTGGAAGCAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGTACCCCATTGTGAGC
CCCCGACCTGCCTGCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGACGGGCTTTCCTGACC
CTCTGTCACGGCATCACGCTTTCTGCTTCAGAGCTCTGCCATCCGTAGTGGAGGAGGGGGTGACCTCACTCTTTGAAGA
AGAGGTGATGGTAACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTGTGGAGACAGAGCTT
TCCTCTGAGCCTGAGAATCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCTCTCAGCGAGACCAT
CTGCTTTTCCTCCAGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTGTCCGGAGAGTTCCC
TGAGTCTGGAGAGCACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAGAACCAACTTCCGTA
GGTTTTGAACTGAGTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCAGAGCAGTGGCTTTG
TACCTGGAGAAAGTGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATCAGCGGCTTGCCTTC
TGCAGAGGAAGAGGTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAGCTGAAAGCAGTGGT
CTGCATTCTGGATTTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGAGGAAAGTGGGCTCG
CCTCTGGTTTTCCCACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCGGGACGGCAAGAGGA
GGGAAAAGGATCAATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGGACAGCAGTGGGGCC
AGAGGGCTGCCCTCGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGAGCATTCCGGGGTGC
CTGGGCTCAGTGGAGAGCCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAGCTCAGTGGGGAGCA
TTCTGGGCTTCCTGAGCTCAGTGGAGAGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCGGACTGGACATCAGT
GGGGAACCATCTGGAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGTTGATGGAAGTGGTG
AGGTCTCAGGCGTTACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCAGTCAGTTGCAGAAGCAGAAGCAAAAGA
AATTCTAGAGATCAGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATGTCAGCGGTCAGCCT
TCGGGACACATAGACTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAAGCGGAGCGGTTGAGAGCA
GTGGAGAAGCCTCTGGGGTTGAAGTCACCAGTGTCCTCGCGTCTGGAGAGGAAAGTGGGCTCACCTCAGGCTTTCCCAC
CGTGTCTCTCGTGGATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTGGGAGAAGGACCATCT
GGGATGATAGAAATCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAAGGGTCTGGAGCTGTGCAGTCTAGTG
GGCTTCCTTCAGGAACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGACATTTCTGGAGCCAC
AGATCTAAGCGGACAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAGTCACTTTAGTCACA
TCCGATTTAGTAGAAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGTGACGTTTCCCTATG
TCTTTGGGCCAAGTGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGTGGTATAGAAACATC
AGCAGCTTATGAAATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAGATCAAGAAATCAGT
GGGGAAGCATCTGCATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGAAACATCTGCATACC
CTGAGATTAGCACAGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAAATTAGCACAGAAAC
ATCCACAATACAAGAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCACCTTTCAAGAAATC
AGTGGGGAAACGTCCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGGCGAAACGTCTGCGT
TTCCCGAGATTACCATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCCGAAATTAGCATAGA
AACATCCACAGTCCATGAAATCATGGAGAAACATCTGCATTTCCTGAAATTAGCATAGCAACTTCCACCGTCCGTGAAA
TCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGGGGTGAAACATCTGC
ATTGCCTGAGATTACCGTAGAGACATCCACTGTCCATGAAACCAGTGGGGAAGCGTCTGCCTTTCCTGAAATTAGCATA
GAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCCTACCCTGAGGTTAGCATAGAGGCATCCACAACTCAAG
AAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAGAGACATCCACAAGTCAGGAAGCCCGCGGTGAAACATC
TGCCTTTCCTGAGATTGGCATAGAGACATCCACAGCCCACGAAGGCAGTGGGGAAACTCCTGGGCTGCCTGCTGTTAGC
ACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCCGGTGCTCCTGAGAAGGAAACTCCCGACACAACATCAC
ATCTGATCACGGGCGTTTCAGGGGAAACCTCTGTCCCAGATGCTGTAATCAGTACCAGTGCTCCAGATGTTGAACTAGC
GCAGGGACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGAGCCCTCCACTCCTGCGGCATCTGGACAAGAGACAGAA
ACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCTACTGCTGCCCTGCATCCAGCCTCCCAAGAAGCAGTAG
ATGCACTGGGACCCACGACAGAAGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCA
CTTTGAAGAGAGGGAGACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACT
CCAGAGGAACAAGAATTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATG
ATTTCCGCTGGTCTGATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTCCGCGGG
CGAGGACTGCGTTGTGATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACG
TGCAAGAAGGGAACAGTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCT
ATGAGATCAACTCCCTGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACC
CAACGGGCACTGGGAGGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACGCCGGCTATACAAGAGGAGCCCC
CGGAGCCGGTTGAGACCCGGTGTCGTGCACAGACCCACCCATTAGAGCGGGGCGAGGGGTGAGCAGAGAGAGAAAAGAG
AGATTTTTACGGAGCACTTCTATTAACAGAGTCAATTTCTTCTTCTTGTTGTTGC
CitationDomowicz MS, Sanders TA, Ragsdale CW, Schwartz NB. Aggrecan is expressed by embryonic brain glia and regulates astrocyte development. Dev Biol. 2008 Mar 1;315(1):114-24. Epub 2008 Jan 22.
CopyrightCopyright © 2008 Published by Elsevier Inc.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc# XM_001232949 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-38
stage 31
stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
stage 38
stage 38
Diencephalon
Forebrain
Hindbrain
Isthmus/MHB
Midbrain
Rhombomeres
Telencephalon
 

Entry 5

GEISHA IdAGGRECAN.Thompson.2010bData SourcePublication
Complete cDNA Template Probeshow
GGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGAAGTGGCAAGCTCTTTCCGTCTTGAGCA
CCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAGCACTGCACTGAACTGTTAAAGGTAAAC
TATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCTGCCTCCGCAGAGCTCTCAGACAGTAGC
GATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGGGAAGCTCCCTGAACATCCCCTGCTATT
TCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAAATGGAGCAAGCTTTCCAATGGAACAGA
GATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTACAGAGAGGTGATCTCCTTGCCCAATTAC
CCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACCACACTGGGATTTATCGCTGTGAAGTGA
TGTATGGGATTGAGGACAGACAAGACACCATAGAGGTCCTGGTGAAAGGCGTCGTGTTCCACTACAGAGCAATCTCCAC
AAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGTGCTGTCATTGCCACCCCTGAGCAGCTG
CAGGCTGCCTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTGATCAGACTGTCAGGTACCCCATCCATC
TGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAACCTACGGTGTCCGTGAGACAGATGAAAC
CTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCCACCTCCCCCGAGAAGTTCACCTTCCAG
GAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCGAGCTGTACTTGGCCTGGAAGGATGGCA
TGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGCTACCCCATTTCCAGAGCACGGCCCAATTGTGGAGG
GAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGGTACCCTCACCCCAGCTCACGCTACGAT
GCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCACTGACGAGGTTGGGACTGAGCTGGGCA
GTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCCACGCAATGTCACAGAAGAGGAGGCCCG
TGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACAGCCACCGCCACTGAGCTGTATGAGGCCTTCACCGTCCTGCCT
GACCTCTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGAACGTGACCAGAGAGGAGATCACAGGGA
TATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCACCACCGGAATGGCAGAGGTGAGCTCAGT
GGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCATTCACCATAGAAGATCATCTCGTGCAA
GTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCACTGGTGTGGTGTTCCACTACCGTGCTG
CCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGAGAACAATGCCGTTATTGCCACTCCCGA
GCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGGCTGCGGGACCAGACGGTCAGGTATCCC
ATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTGTGCGGTCATACGGCATGCGCCCGGCCT
CAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTTTTTTGCCACCCAGCCAGAGCAGTTCAC
CTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCTGCTGGGCAACTCCACGCTGCCTGGAAG
CAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGTACCCCATTGTGAGCCCCCGACCTGCCT
GCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGACGGGCTTTCCTGACCCTCTGTCACGGCA
TCACGCTTTCTGCTTCAGAGCTCTGCCATCCGTAGTGGAGGAGGGGGTGACCTCACTCTTTGAAGAAGAGGTGATGGTA
ACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTGTGGAGACAGAGCTTTCCTCTGAGCCTG
AGAATCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCTCTCAGCGAGACCATCTGCTTTTCCTCC
AGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTGTCCGGAGAGTTCCCTGAGTCTGGAGAG
CACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAGAACCAACTTCCGTAGGTTTTGAACTGA
GTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCAGAGCAGTGGCTTTGTACCTGGAGAAAG
TGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATCAGCGGCTTGCCTTCTGCAGAGGAAGAG
GTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAGCTGAAAGCAGTGGTCTGCATTCTGGAT
TTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGAGGAAAGTGGGCTCGCCTCTGGTTTTCC
CACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCGGGACGGCAAGAGGAGGGAAAAGGATCA
ATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGGACAGCAGTGGGGCCAGAGGGCTGCCCT
CGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGAGCATTCCGGGGTGCCTGGGCTCAGTGG
AGAGCCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAGCTCAGTGGGGAGCATTCTGGGCTTCCT
GAGCTCAGTGGAGAGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCGGACTGGACATCAGTGGGGAACCATCTG
GAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGTTGATGGAAGTGGTGAGGTCTCAGGCGT
TACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCAGTCAGTTGCAGAAGCAGAAGCAAAAGAAATTCTAGAGATC
AGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATGTCAGCGGTCAGCCTTCGGGACACATAG
ACTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAAGCGGAGCGGTTGAGAGCAGTGGAGAAGCCTC
TGGGGTTGAAGTCACCAGTGTCCTCGCGTCTGGAGAGGAAAGTGGGCTCACCTCAGGCTTTCCCACCGTGTCTCTCGTG
GATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTGGGAGAAGGACCATCTGGGATGATAGAAA
TCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAAGGGTCTGGAGCTGTGCAGTCTAGTGGGCTTCCTTCAGG
AACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGACATTTCTGGAGCCACAGATCTAAGCGGA
CAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAGTCACTTTAGTCACATCCGATTTAGTAG
AAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGTGACGTTTCCCTATGTCTTTGGGCCAAG
TGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGTGGTATAGAAACATCAGCAGCTTATGAA
ATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAGATCAAGAAATCAGTGGGGAAGCATCTG
CATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGAAACATCTGCATACCCTGAGATTAGCAC
AGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAAATTAGCACAGAAACATCCACAATACAA
GAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCACCTTTCAAGAAATCAGTGGGGAAACGT
CCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGGCGAAACGTCTGCGTTTCCCGAGATTAC
CATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCCGAAATTAGCATAGAAACATCCACAGTC
CATGAAATCAGTGGGGAAAGTTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGGGGTGAAA
CATCTGCGTTCCCTGAGATTACCATAGAAGCCTCCACCATTCAAGAGATCAGTGGAGAAACATCTGCATTTCCTGAAAT
TAGCATAGCAACTTCCACCGTCCGTGAAATCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACG
AGTCAAGAAGCCCGGGGTGAAACATCTGCATTGCCTGAGATTACCGTAGAGACATCCACTGTCCATGAAACCAGTGGGG
AAGCGTCTGCCTTTCCTGAAATTAGCATAGAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCCTACCCTGA
GGTTAGCATAGAGGCATCCACAACTCAAGAAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAGAGACATCC
ACAAGTCAGGAAGCCCGCGGTGAAACATCTGCCTTTCCTGAGATTGGCATAGAGACATCCACAGCCCACGAAGGCAGTG
GGGAAACTCCTGGGCTGCCTGCTGTTAGCACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCCGGTGCTCC
TGAGAAGGAAACTCCCGACACAACATCACATCTGATCACGGGCGTTTCAGGGGAAACCTCTGTCCCAGATGCTGTAATC
AGTACCAGTGCTCCAGATGTTGAACTAGCGCAGGGACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGAGCCCTCCA
CTCCTGCGGCATCTGGACAAGAGACAGAAACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCTACTGCTGC
CCTGCATCCAGCCTCCCAAGAAGCAGTAGATGCACTGGGACCCACGACAGAAGACACTGATGAGTGCCACTCAAGCCCC
TGTCTGAATGGAGCTACCTGCGTTGATGGCATCGACTCTTTCAAATGCTTATGCCTTCCCAGCTACGGAGGGGACCTGT
GTGAGATCGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCACTTTGAAGAGAGGGA
GACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACTCCAGAGGAACAAGAA
TTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATGATTTCCGCTGGTCTG
ATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTCCGCGGGCGAGGACTGCGTTGT
GATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACGTGCAAGAAGGGAACA
GTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCTATGAGATCAACTCCC
TGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACCCAACGGGCACTGGGA
GGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACGCCGGCTATACAAGAGGAGCCCCCGGAGCCGGTTGAGA
CCCGGTGTCGTGCACAGACCCACCCATTAGAGCGGGGCGAGGGGTGAGCAGAGAGAGAAAAGAGAGATTTTTACGGAGC
ACTTCTATTAACAGAGTCAATTTCTTCTTCTTGTTGTTGCTTTTTTGTCATATAAGG
CitationH. Thompson, J.S. Griffiths, G. Jeffery, I.M. McGonnell. The retinal pigment epithelium of the eye regulates the development of scleral cartilage. Dev Biol. 2010 November 1; 347(1-13): 40-52.
Copyright2010
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204955.2 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-29
stage 29
stage 29
stage 29
stage 29
Eye
Optic Cup

Entry 6

GEISHA IdAGGRECAN.Pirok.2005Data SourcePublication
Complete cDNA Template Probeshow
GGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGAAGTGGCAAGCTCTTTCCGTCTTGAGCA
CCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAGCACTGCACTGAACTGTTAAAGGTAAAC
TATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCTGCCTCCGCAGAGCTCTCAGACAGTAGC
GATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGGGAAGCTCCCTGAACATCCCCTGCTATT
TCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAAATGGAGCAAGCTTTCCAATGGAACAGA
GATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTACAGAGAGGTGATCTCCTTGCCCAATTAC
CCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACCACACTGGGATTTATCGCTGTGAAGTGA
TGTATGGGATTGAGGACAGACAAGACACCATAGAGGTCCTGGTGAAAGGCGTCGTGTTCCACTACAGAGCAATCTCCAC
AAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGTGCTGTCATTGCCACCCCTGAGCAGCTG
CAGGCTGCCTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTGATCAGACTGTCAGGTACCCCATCCATC
TGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAACCTACGGTGTCCGTGAGACAGATGAAAC
CTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCCACCTCCCCCGAGAAGTTCACCTTCCAG
GAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCGAGCTGTACTTGGCCTGGAAGGATGGCA
TGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGCTACCCCATTTCCAGAGCACGGCCCAATTGTGGAGG
GAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGGTACCCTCACCCCAGCTCACGCTACGAT
GCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCACTGACGAGGTTGGGACTGAGCTGGGCA
GTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCCACGCAATGTCACAGAAGAGGAGGCCCG
TGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACAGCCACCGCCACTGAGCTGTATGAGGCCTTCACCGTCCTGCCT
GACCTCTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGAACGTGACCAGAGAGGAGATCACAGGGA
TATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCACCACCGGAATGGCAGAGGTGAGCTCAGT
GGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCATTCACCATAGAAGATCATCTCGTGCAA
GTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCACTGGTGTGGTGTTCCACTACCGTGCTG
CCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGAGAACAATGCCGTTATTGCCACTCCCGA
GCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGGCTGCGGGACCAGACGGTCAGGTATCCC
ATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTGTGCGGTCATACGGCATGCGCCCGGCCT
CAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTTTTTTGCCACCCAGCCAGAGCAGTTCAC
CTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCTGCTGGGCAACTCCACGCTGCCTGGAAG
CAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGTACCCCATTGTGAGCCCCCGACCTGCCT
GCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGACGGGCTTTCCTGACCCTCTGTCACGGCA
TCACGCTTTCTGCTTCAGAGCTCTGCCATCCGTAGTGGAGGAGGGGGTGACCTCACTCTTTGAAGAAGAGGTGATGGTA
ACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTGTGGAGACAGAGCTTTCCTCTGAGCCTG
AGAATCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCTCTCAGCGAGACCATCTGCTTTTCCTCC
AGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTGTCCGGAGAGTTCCCTGAGTCTGGAGAG
CACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAGAACCAACTTCCGTAGGTTTTGAACTGA
GTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCAGAGCAGTGGCTTTGTACCTGGAGAAAG
TGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATCAGCGGCTTGCCTTCTGCAGAGGAAGAG
GTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAGCTGAAAGCAGTGGTCTGCATTCTGGAT
TTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGAGGAAAGTGGGCTCGCCTCTGGTTTTCC
CACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCGGGACGGCAAGAGGAGGGAAAAGGATCA
ATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGGACAGCAGTGGGGCCAGAGGGCTGCCCT
CGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGAGCATTCCGGGGTGCCTGGGCTCAGTGG
AGAGCCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAGCTCAGTGGGGAGCATTCTGGGCTTCCT
GAGCTCAGTGGAGAGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCGGACTGGACATCAGTGGGGAACCATCTG
GAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGTTGATGGAAGTGGTGAGGTCTCAGGCGT
TACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCAGTCAGTTGCAGAAGCAGAAGCAAAAGAAATTCTAGAGATC
AGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATGTCAGCGGTCAGCCTTCGGGACACATAG
ACTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAAGCGGAGCGGTTGAGAGCAGTGGAGAAGCCTC
TGGGGTTGAAGTCACCAGTGTCCTCGCGTCTGGAGAGGAAAGTGGGCTCACCTCAGGCTTTCCCACCGTGTCTCTCGTG
GATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTGGGAGAAGGACCATCTGGGATGATAGAAA
TCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAAGGGTCTGGAGCTGTGCAGTCTAGTGGGCTTCCTTCAGG
AACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGACATTTCTGGAGCCACAGATCTAAGCGGA
CAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAGTCACTTTAGTCACATCCGATTTAGTAG
AAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGTGACGTTTCCCTATGTCTTTGGGCCAAG
TGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGTGGTATAGAAACATCAGCAGCTTATGAA
ATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAGATCAAGAAATCAGTGGGGAAGCATCTG
CATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGAAACATCTGCATACCCTGAGATTAGCAC
AGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAAATTAGCACAGAAACATCCACAATACAA
GAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCACCTTTCAAGAAATCAGTGGGGAAACGT
CCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGGCGAAACGTCTGCGTTTCCCGAGATTAC
CATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCCGAAATTAGCATAGAAACATCCACAGTC
CATGAAATCAGTGGGGAAAGTTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGGGGTGAAA
CATCTGCGTTCCCTGAGATTACCATAGAAGCCTCCACCATTCAAGAGATCAGTGGAGAAACATCTGCATTTCCTGAAAT
TAGCATAGCAACTTCCACCGTCCGTGAAATCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACG
AGTCAAGAAGCCCGGGGTGAAACATCTGCATTGCCTGAGATTACCGTAGAGACATCCACTGTCCATGAAACCAGTGGGG
AAGCGTCTGCCTTTCCTGAAATTAGCATAGAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCCTACCCTGA
GGTTAGCATAGAGGCATCCACAACTCAAGAAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAGAGACATCC
ACAAGTCAGGAAGCCCGCGGTGAAACATCTGCCTTTCCTGAGATTGGCATAGAGACATCCACAGCCCACGAAGGCAGTG
GGGAAACTCCTGGGCTGCCTGCTGTTAGCACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCCGGTGCTCC
TGAGAAGGAAACTCCCGACACAACATCACATCTGATCACGGGCGTTTCAGGGGAAACCTCTGTCCCAGATGCTGTAATC
AGTACCAGTGCTCCAGATGTTGAACTAGCGCAGGGACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGAGCCCTCCA
CTCCTGCGGCATCTGGACAAGAGACAGAAACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCTACTGCTGC
CCTGCATCCAGCCTCCCAAGAAGCAGTAGATGCACTGGGACCCACGACAGAAGACACTGATGAGTGCCACTCAAGCCCC
TGTCTGAATGGAGCTACCTGCGTTGATGGCATCGACTCTTTCAAATGCTTATGCCTTCCCAGCTACGGAGGGGACCTGT
GTGAGATCGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCACTTTGAAGAGAGGGA
GACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACTCCAGAGGAACAAGAA
TTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATGATTTCCGCTGGTCTG
ATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTCCGCGGGCGAGGACTGCGTTGT
GATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACGTGCAAGAAGGGAACA
GTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCTATGAGATCAACTCCC
TGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACCCAACGGGCACTGGGA
GGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACGCCGGCTATACAAGAGGAGCCCCCGGAGCCGGTTGAGA
CCCGGTGTCGTGCACAGACCCACCCATTAGAGCGGGGCGAGGGGTGAGCAGAGAGAGAAAAGAGAGATTTTTACGGAGC
ACTTCTATTAACAGAGTCAATTTCTTCTTCTTGTTGTTGCTTTTTTGTCATATAAGG
CitationPirok EW 3rd, Domowicz MS, Henry J, Wang Y, Santore M, Mueller MM, Schwartz NB. APBP-1, a DNA/RNA-binding protein, interacts with the chick aggrecan regulatory region. J Biol Chem. 2005 Oct 21;280(42):35606-16. Epub 2005 Aug 12.
CopyrightCopyright © 2012 by American Society for Biochemistry and Molecular Biology
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-38
stage 38
stage 38
Leg Bones
 

Entry 7

GEISHA IdACAN.Yakushiji-Kaminatsui.2018Data SourcePublication
Complete cDNA Template Probeshow
GGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGAAGTGGCAAGCTCTTTCCGTCTTGAGCA
CCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAGCACTGCACTGAACTGTTAAAGGTAAAC
TATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCTGCCTCCGCAGAGCTCTCAGACAGTAGC
GATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGGGAAGCTCCCTGAACATCCCCTGCTATT
TCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAAATGGAGCAAGCTTTCCAATGGAACAGA
GATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTACAGAGAGGTGATCTCCTTGCCCAATTAC
CCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACCACACTGGGATTTATCGCTGTGAAGTGA
TGTATGGGATTGAGGACAGACAAGACACCATAGAGGTCCTGGTGAAAGGCGTCGTGTTCCACTACAGAGCAATCTCCAC
AAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGTGCTGTCATTGCCACCCCTGAGCAGCTG
CAGGCTGCCTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTGATCAGACTGTCAGGTACCCCATCCATC
TGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAACCTACGGTGTCCGTGAGACAGATGAAAC
CTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCCACCTCCCCCGAGAAGTTCACCTTCCAG
GAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCGAGCTGTACTTGGCCTGGAAGGATGGCA
TGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGCTACCCCATTTCCAGAGCACGGCCCAATTGTGGAGG
GAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGGTACCCTCACCCCAGCTCACGCTACGAT
GCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCACTGACGAGGTTGGGACTGAGCTGGGCA
GTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCCACGCAATGTCACAGAAGAGGAGGCCCG
TGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACAGCCACCGCCACTGAGCTGTATGAGGCCTTCACCGTCCTGCCT
GACCTCTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGAACGTGACCAGAGAGGAGATCACAGGGA
TATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCACCACCGGAATGGCAGAGGTGAGCTCAGT
GGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCATTCACCATAGAAGATCATCTCGTGCAA
GTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCACTGGTGTGGTGTTCCACTACCGTGCTG
CCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGAGAACAATGCCGTTATTGCCACTCCCGA
GCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGGCTGCGGGACCAGACGGTCAGGTATCCC
ATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTGTGCGGTCATACGGCATGCGCCCGGCCT
CAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTTTTTTGCCACCCAGCCAGAGCAGTTCAC
CTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCTGCTGGGCAACTCCACGCTGCCTGGAAG
CAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGTACCCCATTGTGAGCCCCCGACCTGCCT
GCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGACGGGCTTTCCTGACCCTCTGTCACGGCA
TCACGCTTTCTGCTTCAGAGCTCTGCCATCCGTAGTGGAGGAGGGGGTGACCTCACTCTTTGAAGAAGAGGTGATGGTA
ACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTGTGGAGACAGAGCTTTCCTCTGAGCCTG
AGAATCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCTCTCAGCGAGACCATCTGCTTTTCCTCC
AGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTGTCCGGAGAGTTCCCTGAGTCTGGAGAG
CACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAGAACCAACTTCCGTAGGTTTTGAACTGA
GTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCAGAGCAGTGGCTTTGTACCTGGAGAAAG
TGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATCAGCGGCTTGCCTTCTGCAGAGGAAGAG
GTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAGCTGAAAGCAGTGGTCTGCATTCTGGAT
TTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGAGGAAAGTGGGCTCGCCTCTGGTTTTCC
CACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCGGGACGGCAAGAGGAGGGAAAAGGATCA
ATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGGACAGCAGTGGGGCCAGAGGGCTGCCCT
CGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGAGCATTCCGGGGTGCCTGGGCTCAGTGG
AGAGCCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAGCTCAGTGGGGAGCATTCTGGGCTTCCT
GAGCTCAGTGGAGAGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCGGACTGGACATCAGTGGGGAACCATCTG
GAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGTTGATGGAAGTGGTGAGGTCTCAGGCGT
TACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCAGTCAGTTGCAGAAGCAGAAGCAAAAGAAATTCTAGAGATC
AGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATGTCAGCGGTCAGCCTTCGGGACACATAG
ACTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAAGCGGAGCGGTTGAGAGCAGTGGAGAAGCCTC
TGGGGTTGAAGTCACCAGTGTCCTCGCGTCTGGAGAGGAAAGTGGGCTCACCTCAGGCTTTCCCACCGTGTCTCTCGTG
GATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTGGGAGAAGGACCATCTGGGATGATAGAAA
TCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAAGGGTCTGGAGCTGTGCAGTCTAGTGGGCTTCCTTCAGG
AACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGACATTTCTGGAGCCACAGATCTAAGCGGA
CAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAGTCACTTTAGTCACATCCGATTTAGTAG
AAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGTGACGTTTCCCTATGTCTTTGGGCCAAG
TGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGTGGTATAGAAACATCAGCAGCTTATGAA
ATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAGATCAAGAAATCAGTGGGGAAGCATCTG
CATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGAAACATCTGCATACCCTGAGATTAGCAC
AGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAAATTAGCACAGAAACATCCACAATACAA
GAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCACCTTTCAAGAAATCAGTGGGGAAACGT
CCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGGCGAAACGTCTGCGTTTCCCGAGATTAC
CATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCCGAAATTAGCATAGAAACATCCACAGTC
CATGAAATCAGTGGGGAAAGTTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGGGGTGAAA
CATCTGCGTTCCCTGAGATTACCATAGAAGCCTCCACCATTCAAGAGATCAGTGGAGAAACATCTGCATTTCCTGAAAT
TAGCATAGCAACTTCCACCGTCCGTGAAATCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACG
AGTCAAGAAGCCCGGGGTGAAACATCTGCATTGCCTGAGATTACCGTAGAGACATCCACTGTCCATGAAACCAGTGGGG
AAGCGTCTGCCTTTCCTGAAATTAGCATAGAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCCTACCCTGA
GGTTAGCATAGAGGCATCCACAACTCAAGAAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAGAGACATCC
ACAAGTCAGGAAGCCCGCGGTGAAACATCTGCCTTTCCTGAGATTGGCATAGAGACATCCACAGCCCACGAAGGCAGTG
GGGAAACTCCTGGGCTGCCTGCTGTTAGCACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCCGGTGCTCC
TGAGAAGGAAACTCCCGACACAACATCACATCTGATCACGGGCGTTTCAGGGGAAACCTCTGTCCCAGATGCTGTAATC
AGTACCAGTGCTCCAGATGTTGAACTAGCGCAGGGACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGAGCCCTCCA
CTCCTGCGGCATCTGGACAAGAGACAGAAACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCTACTGCTGC
CCTGCATCCAGCCTCCCAAGAAGCAGTAGATGCACTGGGACCCACGACAGAAGACACTGATGAGTGCCACTCAAGCCCC
TGTCTGAATGGAGCTACCTGCGTTGATGGCATCGACTCTTTCAAATGCTTATGCCTTCCCAGCTACGGAGGGGACCTGT
GTGAGATCGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCACTTTGAAGAGAGGGA
GACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACTCCAGAGGAACAAGAA
TTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATGATTTCCGCTGGTCTG
ATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTCCGCGGGCGAGGACTGCGTTGT
GATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACGTGCAAGAAGGGAACA
GTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCTATGAGATCAACTCCC
TGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACCCAACGGGCACTGGGA
GGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACGCCGGCTATACAAGAGGAGCCCCCGGAGCCGGTTGAGA
CCCGGTGTCGTGCACAGACCCACCCATTAGAGCGGGGCGAGGGGTGAGCAGAGAGAGAAAAGAGAGATTTTTACGGAGC
ACTTCTATTAACAGAGTCAATTTCTTCTTCTTGTTGTTGCTTTTTTGTCATATAAGG
CitationNayuta Yakushiji-Kaminatsui, Lucille Lopez-Delisle, Christopher Chase Bolt, Guillaume Andrey, Leonardo Beccari, Denis Duboule. Similarities and differences in the regulation of HoxD genes during chick and mouse limb development. PLoS Biol. 2018 Nov 26;16(11):e3000004. DOI: 10.1371/journal.pbio.3000004.
CopyrightCopyright © 2018 Yakushiji-Kaminatsui et al.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204955.2).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-28
stage 28
stage 28
Leg
Wing
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.3977

Mouse

Emage
EurexpressMGI:99602
MGI GXDMGI:99602

Frog

Xenbase921493

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-100422-16, ZDB-GENE-050208-221, ZDB-GENE-100422-16
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