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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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ENPP2
ectonucleotide pyrophosphatase/phosphodiesterase 2

Gene

Official Symbol	ENPP2
Official Full Name	ectonucleotide pyrophosphatase/phosphodiesterase 2
CGNC ID	12299
also known as	ectonucleotide pyrophosphatase/phosphodiesterase family member 2\|autotaxin, E-NPP 2, Extracellular lysophospholipase D, LysoPLD, Autotaxin (ATX), Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 precursor
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001198662
Polypeptide	NP_001185591
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.11463

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	5168	ENSG00000136960		MIM:601060
Mouse	18606	ENSMUSG00000022425	All phenotypic alleles (8):Targeted, knock-out(3) Targeted, other(5)	MGI:1321390
Xenopus	548690, 735240			1016185
Zebrafish	393575, 100332039	ENSDARG00000011257	ZDB-GENE-040426-1156, ZDB-GENE-040426-1156	ZFIN:ZDB-GENE-040426-1156, ZFIN:ZDB-GENE-040426-1156

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	420361
Ensembl Gene	ENSGALG00000016428
KEGG	gga:420361

Entry 1

GEISHA Id	ATX.Ohuchi.2007	Data Source	Publication
Complete cDNA Template Probe	show ACATGATGAAATCACCCCCTGGACAAATCACACGAGCCTGTCAACCTCACCAGGTGGGATTACTTGTAGCTAATAGCCC GAACTCCCAGAGCAAACAGAGCTCTGCGCTCACTATAAAGCAAAAGGGACGGTACCGCACGGGCTTTTCAAGAATCCTC TAGTATGGCTAAGAAGGGCTGCTTCTACTTCCACCAGGTTATATCTTTATTTGCTTTTGCCTTTGGAGTAAATGTCTGC ATGGGATTTACAACAAATCGCTTTAGGAGGTCTGAAGAATGGGATGAGGGCCCAATCTCAGTCCTGTCAGATTCCCCCT GGATCAGTACCTCTGGCTCCTGCAAAAACAGATGCTTTGAACTTCAAGAGGCAGAGCCTCCTGGCTGCCGCTGTGACAA CCTGTGCAAGAGCTACAACAGCTGCTGCTTCGACTTTGATGAGCTGTGCTTAAAGACAGCTCGAGGCTGGGAATGTACC AAAGACCGCTGTGGAGAAACCAGGAATGATGACAATGCTTGTCACTGCTCTGAAGACTGCTTAAGTAGAGGAGACTGTT GCACTAATTACCAGGTCGTTTGCAAAGGAGAAACCCACTGGGTCGATGATGACTGTGAAGAGATAAAAACTCCTGAATG TCCAGCAGGCTTTGTTCGTCCTCCTTTGATCATCTTCTCTGTTGATGGTTTCCGTGCATCATATATGAAGAAAGGGAAC AAGGTCATGCCCAATATTGAAAAGCTGAGATCTTGTGGAACACATTCTCCTTACATGAGGCCGGTCTACCCTACAAAAA CCTTCCCCAACTTGTACACCCTTGCTACTGGACTCTATCCTGAATCACATGGAATCGTTGGCAATTCAATGTATGACCC AGTGTTTGATGCCAGCTTCAGTCTTCGAGGGCGAGAGAAATTCAATCACAGATGGTGGGGAGGTCAACCAATTTGGATT ACTGCAGCCAAGCAAGGGGTGAAAGCTGGCACATTCTTCTGGTCTGTTGTCATCCCCCACGAGCGTAGAATACTAACAA TACTGCAGTGGCTGACCCTTCCGGATAACGAAAGGCCTTATGTTTATGCTTTCTACTCTGAGCAACCAGATGCTGCTGG CCACAGATATGGTCCTTTCAACTCAGAGGAGAGTAGTTATGGCTCCCCTCTTACTCCGCCTAAGGGACCTAAGAGAAAG CTTCCTCCTAAGAGGATACAGAAAAGACCAGTTGCAGCTCCAAAGCAAAGAAGAAGAAAAGTACATAGAGTGGATCAAT ATGCTGCGGAAGCTCGTCGGAAGAAAATGATGGTAAATCCCCTGAGAGAGATTGACAAGACAGTAGGACAACTAATGGA TGGACTGAAACAGCTGAAACTGCATCGATGTGTCAATGTCATATTTGTTGGTGATCATGGGATGGAAGATACTACTTGT GAAAGAACTGAATTTTTGAGCAACTACCTGACCAACGTGGAAGATATCATTCTGCTGCCTGGATCTTTAGGGAGAATTC GCCCTAGGTCTAGCAATAACCTGAAATATGACCCCAAAGTGATTGTTGCCAACCTTACATGCAGGAAGCCAGACCAGCA CTTTAAGCCATACTTGAAGCATCACCTTCCTAAACGCTTGCACTATGCTTACAATAGGCGAATTGAGGATGTCCATTTA CTGGTTGAGCGCAAGTGGCATGTAGCAAGGAAAGCTGTGGATGTTTACAAGAAACCAACAGGAAAGTGTTTCTTCCATG GAGACCATGGCTATGACAACAAGATAAACAGCATGCAGACTGTCTTCATAGGTTATGGACCTACATTCAAATACAAGAC CAAAGTACCGCCTTTTGAAAACATTGAACTTTACAATGTCATGTGTGATCTGCTTGGATTAAAGCCTGCTCCCAATAAT GGTACCCACGGAAGTTTGAATCACCTGCTAAGAGCCAATGTTTATAAACCAACTGTGCCAGATGAAGTTGCTAAGCCAC TTTATCCTGTAGCTCTACCTTCTGCATCAGATTTTGATATAGGATGTACATGTGATGATAAGATCCTTCCTAAGAACAA GTTGGATGAACTCAACAAGCGCTTTCATGTCAAGGGAACGGAAGAGAAGCATCTTCTGTACGGGCGCCCTGCAGTGCTG TACCGCACGAAGTACAATATCTTGCACCACCATGACTTTGAAAGTGGCTACAGTGAAACATTCCTGATGCCTCTCTGGA CATCCTACACTATTTCCAAACAGGCAGAGGTATCCGGTGTCCCAGAACACCTGGCCAGCTGCGTCAGGCCCGATCTCCG CATATCTCCAGGAAACAGCCAGAGCTGCTCAGCCTACAGAGGTGACAAGCAGCTCTCCTACAGCTTCCTCTTCCCTCCT CAACTAAGTTCCTCTGCAGAAGCAAAGTATGATGCTTTTCTAATAACAAATATCATTCCAATGTATCCTGCTTTCAAAA AGGTATGGAACTATTTCCAAAGGGTTTTAGTGAAGAGATATGCCACTGAACGAAATGGAGTCAATGTTATAAGTGGACC AATCTTTGACTATGACTATGATGGTTTACATGACACACCTGAAAAAATCAAACAGTTTGTGGAAGGCAGTGCCATCCCT GTTCCTACTCATTACTATGCCATCATAACCAGCTGTTTAGATTTCACTCAGCCAGCCGACAAGTGTGATGGACCACTCT CTGTTCTCTCGTACATCCTTCCCCACCGGCCTGACAACGATGAGAGCTGCAATAGCATGGAAGATGAATCAAAGTGGGT TGAAGATCTTCTTAAGATGCACACTGCACGGGTGCGGGACATTGAGCAGCTCACAAGCTTGGACTTCTTCCGAAAGACG AGTCGCAGCTACACAGAAATCCTCTCCCTAAAGACATACCTGCATACATTTGAAAGTGAAATTTAGCTTTCTAACCTTG CTCAGTGCATTCTTTTATCAACTGGTGTATATTTTTATATTGTTTTTATATTTATTAATTTGAAACCAGGACATTAAAA ATATTAGTATTTTAATCTTGTATCAAATCTTAAATATTAAACCCTTGTGTCATTTGTTTTGTTTCTCTAATGTTTAATA TAGGTATGTCTCTTGGTTTATTTAGTAGCGCTTGTAATACTGCAGCTTAAGTCCTTACTCCAAGCTTTTATCTGGTGCT GCAGAATTTGATACGTGATTCGAGGAAATATTAATTTCCCATGCTCCTTTACCACACTTTTAGTCCTGTACTGTGTATC AAAATACTGAACATGTAAAATTACATTCATTTACTGTTGACTATGTGACAGACATATTTAAACCCTATAGACAAATAGC ATCTTAAATATAATAAACCACACATTCAGTTTTTTTAA
Citation	Ohuchi H, Hayashibara Y, Matsuda H, Onoi M, Mitsumori M, Tanaka M, Aoki J, Arai H, Noji S. Diversified expression patterns of autotaxin, a gene for phospholipid-generating enzyme during mouse and chicken development. Dev Dyn. 2007 Apr;236(4):1134-43.
Copyright	Copyright © 2007 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_418466).

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 8

stage 9

stage 11

Diencephalon
Early Mesoderm
Eye
Hensen's Node
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Rhombomeres

Area Vasculosa
Sinus Rhomboidalis

13-18

stage 13

stage 14

stage 15

stage 18

Blood Vessels
Diencephalon
Ear/Otic Placcode
Eye
Hindbrain
Neural Plate/Tube
Spinal Cord
Telencephalon

Vascular Plexus

19-24

stage 21

stage 23

stage 24

Diencephalon
Ear/Otic Placcode
Hindbrain
Leg
Limb Buds
Neural Plate/Tube
Pharyngeal Arches and Clefts
Rhombomeres
Spinal Cord
Trunk Mesenchyme

Alar Plate
Parencephalon-Synencephalon Boundary
Vascular Plexus

25-30

stage 25

stage 27

stage 30

Leg Mesenchyme
Limb Buds
Pharyngeal Arches and Clefts
Somites
Wing Mesenchyme

Jaw

31-36

stage 32

stage 34

stage 36

Face Mesenchyme
Feathers/Scutae
Leg Mesenchyme

Entry 2

GEISHA Id	Atx.Singh.2016	Data Source	Publication
Complete cDNA Template Probe	show ACATGATGAAATCACCCCCTGGACAAATCACACGAGCCTGTCAACCTCACCAGGTGGGATTACTTGTAGCTAATAGCCC GAACTCCCAGAGCAAACAGAGCTCTGCGCTCACTATAAAGCAAAAGGGACGGTACCGCACGGGCTTTTCAAGAATCCTC TAGTATGGCTAAGAAGGGCTGCTTCTACTTCCACCAGGTTATATCTTTATTTGCTTTTGCCTTTGGAGTAAATGTCTGC ATGGGATTTACAACAAATCGCTTTAGGAGGTCTGAAGAATGGGATGAGGGCCCAATCTCAGTCCTGTCAGATTCCCCCT GGATCAGTACCTCTGGCTCCTGCAAAAACAGATGCTTTGAACTTCAAGAGGCAGAGCCTCCTGGCTGCCGCTGTGACAA CCTGTGCAAGAGCTACAACAGCTGCTGCTTCGACTTTGATGAGCTGTGCTTAAAGACAGCTCGAGGCTGGGAATGTACC AAAGACCGCTGTGGAGAAACCAGGAATGATGACAATGCTTGTCACTGCTCTGAAGACTGCTTAAGTAGAGGAGACTGTT GCACTAATTACCAGGTCGTTTGCAAAGGAGAAACCCACTGGGTCGATGATGACTGTGAAGAGATAAAAACTCCTGAATG TCCAGCAGGCTTTGTTCGTCCTCCTTTGATCATCTTCTCTGTTGATGGTTTCCGTGCATCATATATGAAGAAAGGGAAC AAGGTCATGCCCAATATTGAAAAGCTGAGATCTTGTGGAACACATTCTCCTTACATGAGGCCGGTCTACCCTACAAAAA CCTTCCCCAACTTGTACACCCTTGCTACTGGACTCTATCCTGAATCACATGGAATCGTTGGCAATTCAATGTATGACCC AGTGTTTGATGCCAGCTTCAGTCTTCGAGGGCGAGAGAAATTCAATCACAGATGGTGGGGAGGTCAACCAATTTGGATT ACTGCAGCCAAGCAAGGGGTGAAAGCTGGCACATTCTTCTGGTCTGTTGTCATCCCCCACGAGCGTAGAATACTAACAA TACTGCAGTGGCTGACCCTTCCGGATAACGAAAGGCCTTATGTTTATGCTTTCTACTCTGAGCAACCAGATGCTGCTGG CCACAGATATGGTCCTTTCAACTCAGAGATGATGGTAAATCCCCTGAGAGAGATTGACAAGACAGTAGGACAACTAATG GATGGACTGAAACAGCTGAAACTGCATCGATGTGTCAATGTCATATTTGTTGGTGATCATGGGATGGAAGATACTACTT GTGAAAGAACTGAATTTTTGAGCAACTACCTGACCAACGTGGAAGATATCATTCTGCTGCCTGGATCTTTAGGGAGAAT TCGCCCTAGGTCTAGCAATAACCTGAAATATGACCCCAAAGTGATTGTTGCCAACCTTACATGCAGGAAGCCAGACCAG CACTTTAAGCCATACTTGAAGCATCACCTTCCTAAACGCTTGCACTATGCTTACAATAGGCGAATTGAGGATGTCCATT TACTGGTTGAGCGCAAGTGGCATGTAGCAAGGAAAGCTGTGGATGTTTACAAGAAACCAACAGGAAAGTGTTTCTTCCA TGGAGACCATGGCTATGACAACAAGATAAACAGCATGCAGACTGTCTTCATAGGTTATGGACCTACATTCAAATACAAG ACCAAAGTACCGCCTTTTGAAAACATTGAACTTTACAATGTCATGTGTGATCTGCTTGGATTAAAGCCTGCTCCCAATA ATGGTACCCACGGAAGTTTGAATCACCTGCTAAGAGCCAATGTTTATAAACCAACTGTGCCAGATGAAGTTGCTAAGCC ACTTTATCCTGTAGCTCTACCTTCTGCATCAGATTTTGATATAGGATGTACATGTGATGATAAGAACAAGTTGGATGAA CTCAACAAGCGCTTTCATGTCAAGGGAACGGAAGAGAAGCATCTTCTGTACGGGCGCCCTGCAGTGCTGTACCGCACGA AGTACAATATCTTGCACCACCATGACTTTGAAAGTGGCTACAGTGAAACATTCCTGATGCCTCTCTGGACATCCTACAC TATTTCCAAACAGGCAGAGGTATCCGGTGTCCCAGAACACCTGGCCAGCTGCGTCAGGCCCGATCTCCGCATATCTCCA GGAAACAGCCAGAGCTGCTCAGCCTACAGAGGTGACAAGCAGCTCTCCTACAGCTTCCTCTTCCCTCCTCAACTAAGTT CCTCTGCAGAAGCAAAGTATGATGCTTTTCTAATAACAAATATCATTCCAATGTATCCTGCTTTCAAAAAGGTATGGAA CTATTTCCAAAGGGTTTTAGTGAAGAGATATGCCACTGAACGAAATGGAGTCAATGTTATAAGTGGACCAATCTTTGAC TATGACTATGATGGTTTACATGACACACCTGAAAAAATCAAACAGTTTGTGGAAGGCAGTGCCATCCCTGTTCCTACTC ATTACTATGCCATCATAACCAGCTGTTTAGATTTCACTCAGCCAGCCGACAAGTGTGATGGACCACTCTCTGTTCTCTC GTACATCCTTCCCCACCGGCCTGACAACGATGAGAGCTGCAATAGCATGGAAGATGAATCAAAGTGGGTTGAAGATCTT CTTAAGATGCACACTGCACGGGTGCGGGACATTGAGCAGCTCACAAGCTTGGACTTCTTCCGAAAGACGAGTCGCAGCT ACACAGAAATCCTCTCCCTAAAGACATACCTGCATACATTTGAAAGTGAAATTTAGCTTTCTAACCTTGCTCAGTGCAT TCTTTTATCAACTGGTGTATATTTTTATATTGTTTTTATATTTATTAATTTGAAACCAGGACATTAAAAATATTAGTAT TTTAATCTTGTATCAAATCTTAAATATTAAACCCTTGTGTCATTTGTTTTGTTTCTCTAATGTTTAATATAGGTATGTC TCTTGGTTTATTTAGTAGCGCTTGTAATACTGCAGCTTAAGTCCTTACTCCAAGCTTTTATCTGGTGCTGCAGAATTTG ATACGTGATTCGAGGAAATATTAATTTCCCATGCTCCTTTACCACACTTTTAGTCCTGTACTGTGTATCAAAATACTGA ACATGTAAAATTACATTCATTTACTGTTGACTATGTGACAGACATATTTAAACCCTATAGACAAATAGCATCTTAAATA TAATAAACCACACATTCAGTTTTTTTAA
Citation	Singh PN, Ray A, Azad K, Bandyopadhyay A. A comprehensive mRNA expression analysis of developing chicken articular cartilage. Gene Expr Patterns. 2016 Jan;20(1):22-31.
Copyright	Copyright © 2015 Elsevier B.V. All rights reserved.
Comments	The complete cDNA template sequence was obtained from the information provided in the publication as described in Singh et al. 2016. The probe was synthesized from cDNA clone ChEST520a5. Atx is also known as ENPP2 in NCBI.