GEISHA - A Chicken Embryo Gene Expression Database
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BATF3
basic leucine zipper ATF-like transcription factor 3

Gene
Official SymbolBATF3
Official Full Namebasic leucine zipper ATF-like transcription factor 3
CGNC ID51474
also known asbasic leucine zipper transcriptional factor ATF-like 3|basic leucine zipper transcription factor, ATF-like 3
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_419428
PolypeptideXP_419428
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.10787
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human55509ENSG00000123685MIM:612470
Mouse381319ENSMUSG00000026630All phenotypic alleles (2):Targeted, knock-out(2) MGI:1925491
Xenopus985653
Zebrafish751677ENSDARG00000042577ZDB-GENE-041014-356ZFIN:ZDB-GENE-041014-356
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene421368
Ensembl Gene
KEGGgga:421368

Entry 1

GEISHA IdChEST598e24Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GCTCGTCCTCACTCCAATGAACCCCGCCTCGCGCTCCTGCCCATTCTCCGAAGGTCGTGCCGCTTTGGAAAGCCGATGT
CGCACGTGTTCCGCGGCCAGGAGTGTGCGGGGAGCCACGAAGAAGACGATAAGAAGGTAAGGAGGAGAGAGAAGAACCG
AGTTGCTGCGCAGAGAAGTCGGAAGAAACAAACGCAGAAAGCGGACAAACTTCACGAGGAATATGAATCTCTTGAGCAA
GAAAATACCTCCCTGAAAAAAGAAATCGGAAAGCTAACAGATGAAATGAAACACTTGAGTGAAGTGTTGAAGGATCACG
AAAAGATCTGTCCACTATTGCACTGCACCATGAACTTTGTGACCATACCAAGGCCTGATGCACTCAGCAGCTGCCTGCC
CAGATGAGACATCTCCTCGACCGTTGTTAAGTGTGATGTGTGAAAGTGCCAGTCAAGTGGGAGATGTGAAGAACTGCCT
GCTTAAGGTGCGGATCTACCCTTGAAGAGGGCTGGACTTGCCCACACAGCTCTTCTCCACGTGTTTCAGTTTTCTGAAT
CTCGGGAAAACATCAGTATAGGAAAAAAGACAGCTTGAACTACGACTCCTTTCTTTGGTAGAATCTCCGAGCCATGGTT
TTGCGTTCAGAAATATCATGGTGCAGCGCAGCCCACCATCGCTCAATGGAATGCAGACAGGGAAAAGTACCAGCCTTGG
GATGAGATGCCTTTCTCCCACACGCTCACCACTAGCAACCCTTTGTCAGTTGTCATCCTTTTGTATCAGATTCTGGCTG
CTGTTTTGTTTTTTGGTGTTGTTTTTTCCTCTAAACAGATTTGGC
CommentsNo specific expression detected stages 12-18.
no images

Entry 2

GEISHA IdBATF3.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATGATGTCGCACGTGTTCCGCG
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGGGTGAGCGTGTGGGAGAAAGGCcDNA Template Length667
Forward cDNA Template Probeshow
CNTCATCCCAAGGGCTGGGTACTTTTCCCNGGTCTGCATTCCATTGAGCGATGGTGGGCTGCGCTGCACCCCCCATATA
NAAGGGAACGCAAAACCATGGCTCGGAGATTCTACCAAAGAAAGGAGTCGTAGTTCAAGCTGTCTTTTTTCCTATACTG
ATGTTTTCCCGAGATTCAGAAAACTGAAACACGTGGAGAAGAGCTGTGTGGGCAAGTCCAGCCCTCTTCAAGGGTAGAT
CCGCACCTTAAGCAGGCAGTTCTTCACATCTCCCACTTGACTGGCACTTTCACACATCACACTTAACAACGGTCGAGGA
GATGTCTCATCTGGGCAGGCAGCTGCTGAGTGCATCAGGCCTTGGTATGGTCACAAAGTTCATGGTGCAGTGCAATAGT
GGACAGATCTTTTCGTGATCCTTCAACACTTCACTCAAGTGTTTCATTTCATCTGTTAGCTTTCCGATTTCTTTTTTCA
GGGAGGTATTTTCTTGCTCAAGAGATTCATATTCCTCGTGAAGTTTGTCCGCTTTCTGCGTTTGTTTCTTCCGACTTCT
CTGCGCAGCAACTCGGTTCTTCTCTCTCCTCCTTACCTTCTTATCGTCTTCTTCGTGGCTCCCCGCACACTCCTGGCCG
CGGAACACGTGCGACATCATATTCTGCGGCCGCAAGCTTTTATAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 7
stage 7
stage 8
stage 8
stage 9
stage 9
stage 10
Anterior Intestinal Portal
Blood Vessels
Endoderm
Extraembryonic
Lateral Plate Mesoderm
 
13-18
stage 13
stage 15
Blood Vessels
Lateral Plate Mesoderm
Neural Plate/Tube
Sinus Venosus
low expression
19-24
stage 24
stage 24
stage 24
Eye
Liver
Pharyngeal Arches and Clefts
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.10787

Mouse

EmageMGI:1925491
EurexpressMGI:1925491
MGI GXDMGI:1925491

Frog

Xenbase985653

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041014-356
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