GEISHA - A Chicken Embryo Gene Expression Database
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BBX
BBX, HMG-box containing

Gene
Official SymbolBBX
Official Full NameBBX, HMG-box containing
CGNC ID11436
also known asHMG box transcription factor BBX|HMG-BOX transcription factor BBX|bobby sox homolog, HMG box transcription factor BBX, Bobby sox homolog, HMG box- containing protein 2
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNAXM_416622
PolypeptideXP_416622
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human56987ENSG00000114439
Mouse70508ENSMUSG00000022641All phenotypic alleles (2):Targeted, other(2) MGI:1917758
Xenopus100487237, 398532981427
Zebrafish100005540
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene418407
Ensembl GeneENSGALG00000015353
KEGGgga:418407

Entry 1

GEISHA IdChEST229p22Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GTCCTCCGCCGCGCGCCGCTCCTCGCTCCGGCCCAGCGGCGCGCTGCCCGCCCGCCCTCCGGCCCCGCCGAGGTCACTA
TCACATGACAAAGGCTTTGAGACAGCTTCATCTTCGTCTGTCTGTAGTTTCCACTTGCCTTCCTGGGTCACAGTAATGA
AAGGCAGTAGTAGGAATAAGGATCATTCGACAGAAGGAGAAGGAACTGGGAAGCGACCAAAAAGAAAGTGTCTTCAGTG
GCATCCCCTGCTTGCCAAGAAACTCCTTGACTTTTCTGAAGAGGACGAGGAAGAAGAGGAGGAGGAAGATATTGATAAG
GTGCCTCTCCTTGGCGCTGATGGTTTAGAGCAGGATGCTGATGAAACCGAAGATGACGAGTCCTCCGAGCAACGAGCTC
GCCGACCAATGAATGCATTTCTCTTGTTCTGCAAACGCCATCGCTCTCTGGTGCGAAAAGAACACCCTCGCCTCGATAA
CCGTGGCGCAACCAAGATCTTGGCAGATTGGTGGGCTGTTCTAGATCCAAAAGAGAAGCAGAAATACACTGACATGGCC
AAGGAGTACAAAGATGCATTCATGAAGGCAAATCCAGGGTACAAGTGGTGCCCCACAACAAACAAACCTGTGAAAACCC
AGACATCCACTGTTACAAGCAGGAAGAAGCTGTGGGCCTTCCCTTCAGATTCTGCAAAAGATATACCAAGCCCGAGAAA
AGTGACAAAAAGTGAAGAAATGCCACAGCTTAACTTTGGGATGGCAGATCCTACACAAATGGGAGGCCTGAGTATGCTG
CTTTTAGCTGGGGAACATGCCCTGACTGCACAAGAGGTTTCCTCAAATACTTGCCAATCTGATGCGA
Commentsno specific expression detected stages 4-13.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
stage 18
Limb Buds
Pharyngeal Arches and Clefts
 
19
stage 19
stage 19
Limb Buds
Pharyngeal Arches and Clefts
 

Entry 2

GEISHA IdBBX.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGCGACTGATTCTACGGAAGTGTGT
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGGAGGCTTTGATTCTTTGGTGGTCcDNA Template Length949
Forward cDNA Template Probeshow
CATGGGTTCTCCTTGAGTCTTCTTCTCTTTAGATTTCACTTTTTTCTTTGGTGATTTTGTATCCAACATGCTTCCCTTC
ACATTTGAGGATGGGCGGGCTTTTTTGCGTGGAGTTTCTTCAAGTCTCTCAGCACCCCAGTCTCCTTTTGCAACAGCTT
CAATTGTATACATTACACTCTCAATGTCCGACTCGGAGGACTGCCTCTTTTTACAAGGCTTTTTAGGGGTGGATTTTTC
ATTTGTGTGCCGGTCCAACTTATTTTTCTTTTTCTTCTTCTTCAACTTTTCCGGCTTGCCTAGCCCAAGGATACTCATT
TCAGCTAACGAAAGCTCTGGAGAACGGCACATGTAATCCTTTGTGTTATCATTTCTCTCAAAAGGATTGCTATCCTTTA
GAAGACAAGTAAAATCACTGCATTTTACAGTTTCTAATTCCTCAGCTTTTGCCTCATCCCAGTTTTGCAATTTCTCTGA
TTGTTCCATTTTTCCTGTACAGGAGTCTTTTATTGTTGTCTTCTCCAGTTCTTCCACTTCCATTTCTGGAACTTCCCTT
GTCACATCTTCTGATACTTCCACTTTTATTTTCCCAGGTTCTTTCACTTTCACCCCTTCTGAAGCAAGGCACATCTCTG
CCAGTTGAAATAATGCTGATGTTCCACACTGCTTTGTTAAATCAGGACCTGAATGGGATGTACTTGAAGAAATCTCTGC
CAACTGGAAGAGTGCCGACTTCCCGCAGTGCTTTACTGGCTCAGGACTNGACAGCTGGGAAGTATTTGATGAAATCTCA
GCAAACTGAAANAATGNNGANTCCTNAGATNGTTTTACAGAACCCGGGAACACCNGGCTGTGANGNGCTTGAAAAAGAT
CTCTGCAAACTGAAANCAATGATGACTTCNGACACACTTCCG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
Unlabeled
No expression through stage 5
7-12
stage 8
stage 9
stage 11
Anterior Intestinal Portal
Anterior Neuropore
Foregut
Neural Plate/Tube
Somites
 
19-24
stage 19
stage 22
Foregut
Head Mesenchyme
Neural Plate/Tube
Pharyngeal Arches and Clefts
 
25-26
stage 26
stage 26
Foregut
Head Mesenchyme
Lung
Sclerotome
Spinal Cord
Tail
 

Mouse

EmageMGI:1917758
MGI GXDMGI:1917758

Frog

Xenbase981427

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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