GEISHA - A Chicken Embryo Gene Expression Database
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BHLHE23
basic helix-loop-helix family member e23

Gene
Official SymbolBHLHE23
Official Full Namebasic helix-loop-helix family member e23
CGNC ID4265
also known asBHLHB4, class E basic helix-loop-helix protein 23|bHLH transcription factor neuroB|basic helix-loop-helix domain containing, class B, 4|neuroAB
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204504
PolypeptideNP_989835
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.9502
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human128408ENSG00000125533MIM:609331
Mouse140489ENSMUSG00000045493All phenotypic alleles (2):Targeted, knock-out(2) MGI:2153710
Xenopus1018549
Zebrafish559796ENSDARG00000037588ZDB-GENE-050913-22ZFIN:ZDB-GENE-050913-22
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395165
Ensembl Gene
KEGGgga:395165

Entry 1

GEISHA IdBHLHE23.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGTGCTTCACAGGGGACCGATG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGATTCAAAGTGGGTTCTCAAAGAGCCcDNA Template Length1563
Forward cDNA Template Probeshow
GGGTCGCTTNTTNNNTTTTTTTCCTTCTGTAATTTAGGGNACCTCTGAAGGTTGATTTTAGGATTCTAGGTAGATATTG
TAATATAAGCAGGCTTTTTTCTCATGGAAATTGCAAAAGTTAATCACTATACTAAAAATCATTGTTCCAAATATAACCG
TAAGACCGCGAAGACTTTTCTCAGCTTGGAAATTACAGTGAGACACTTTTCAATATAATTATCTGAGAAAAAAGCAATT
ATAAATTCCATTGGTACAATTTTTTAACCAGCACAAACTCATATTTAATATTAAGCTGTTGAGTACTTCATACTTCAAC
TATTTCAGTTTTGGTGAAAACCAAACAGTTTAACCCTTTGCCATTTAAATATTCACAACTGCTTGATTTTCACTAGTTT
TAAACAGAATTAATGAACGTTTAGATAAAAATCATGATTTTCTCCTCTCCTCCAAATAGTTTCTGACAACAACTCAGAC
TGCAAAATATCGGATGACCATTGCTGATTTGCAGCTTCCAGTCATTCGTGCTTCATATTGGTTTTGGTTGACTTTCACT
TCATAGATGCCTTTTAAGAATAATTTCAAGACTTTACTGACAGAGGTACAACGGATAAACTGTCCTGTTAAAAAAGAGG
AAATGAAGATACAAAAATGGAATGGACCAGAACCTATTTTTAATTAGGGGCTGGTGAACAAACCTAATCCCCCCATTCT
GGTTCCAAACCAAAAATTCTTTGGAATAGGTATTAATTAAAATTAATGGCCACGAACAACCGGCTTAAAAGGAAGGGCA
TTCCTTTTCAATTTACCTTACCCTTACCACCGGCCTGGAAAATTGTTTTATTAACCCTAAAAATTTCACCCCCACCCCA
AAA
CommentsNo expression detected from stages 4 to 23.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
Unlabeled
 
25
stage 25
stage 25
Midbrain
 

Entry 2

GEISHA IdBHLHB4.Merchan.2011Data SourcePublication
Complete cDNA Template Probeshow
TGGGCAAGTCGGCAGAGAGCAGCGGCGAGCAGAGCGGCGACGAGGAGGACGGCTTCGAGGCCGGCGTGAAGGGCAGCGC
GGCCTTCGAGAGGGAGGGCAAGCTGAAGGCAGCGGCGCTGGGCAAGAAGCCCAAGGAGCAGCGCTCGCTGCGCCTCAGC
ATCAACGCGCGGGAGCGGCGGCGGATGCACGACCTGAACGACGCGCTGGACGGGCTGCGCTCCGTCATCCCGTACGCCC
ACAGCCCCTCGGTGAGGAAACTCTCCAAAATCGCCACCCTGCTGCTGGCCAAGAACTACATCCTCATGCAGGCGCAGGC
TCTGGAGGAGATGCGGCGGTTGGTGGCCTACCTGAACCAGGGCCAGGCCCTCAGCGCCCCGCTGCCCGCCACCCTCAAC
CCCTTCGGACAGTCGGCCGTGTATCCCTTCACCGGCACGGCCTTGCCCGGCTGCCCCGAGAAATGCACTGCCTTCACAG
GAGCCGCCTCCGCGCTCTGCAAACACTGCAGCGACAAGCCTTGA
CitationMerchán,P, Bardet, SM, Puelles, L, Ferran, JL, Comparison of Pretectal Genoarchitectonic Pattern between Quail and Chicken Embryos. Front Neuroanat. 2011; 5: 23. Prepublished online 2010 December 29. Published online 2011 April 5
CopyrightCopyright © 2011 Merchán, Bardet, Puelles and Ferran.
CommentsCQBhlhb4F2: 5′-TGGGCAAGTCGGCAGAGAG-3′. CQBhlhb4R: 5′-TCAAGGCTTGTCGCTGCAGT-3′.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
Midbrain
Quail
commissural pretectum (CoP)
domain (JcP)
intermediate pretectal
precommissural pretectum (PcP)
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.9502

Mouse

EmageMGI:2153710
EurexpressMGI:2153710
MGI GXDMGI:2153710

Frog

Xenbase1018549

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050913-22
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