GEISHA - A Chicken Embryo Gene Expression Database
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FABP7
fatty acid binding protein 7

Gene
Official SymbolFABP7
Official Full Namefatty acid binding protein 7
CGNC ID49717
also known asfatty acid-binding protein, brain|B-FABP|R-FABP|brain-type fatty acid-binding protein|cl. 453 fatty acid or lipid binding protein|fatty acid binding protein 7, brain|fatty acid-binding protein, retina
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_205308
PolypeptideNP_990639
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human2173ENSG00000164434MIM:602965
Mouse12140ENSMUSG00000019874All phenotypic alleles (4):Targeted, other(4) MGI:101916
Xenopus548661, 496060967703
Zebrafish407736, 58128ENSDARG00000034650, ENSDARG00000007697ZDB-GENE-040614-4, ZDB-GENE-000627-1ZFIN:ZDB-GENE-040614-4, ZFIN:ZDB-GENE-000627-1
Gene Ontology
Molecular Functionlipid binding, transporter activity
Biological Processcell proliferation in forebrain, neurogenesis, prepulse inhibition
Cellular Componentcell projection, cytoplasm, neuronal cell body
Links to other databases
Entrez Gene396246
Ensembl GeneENSGALG00000014866
KEGGgga:396246

Entry 1

GEISHA IdBLBP/FABP7.Domowicz.2008Data SourcePublication
Complete cDNA Template Probeshow
GACAGCCACAACTTTGACGAATACATGAAGGCGCTGGGAGTGGGGTTTGCGATGCGGCAGGTGGGGAACGTGACTAAGC
CCACAGTGATCATCAGCAGCGAGGGGGACAAAGTCGTGATCAGGACTCAGAGCACTTTCAAAAACACAGAAATCAGCTT
TAAACTCGGCGAGGAATTTGATGAAACCACCCCCGACGACAGGAACTGCAAATCAGTTGTGACCCTGGATGGAGACAAG
CTAGTTCATGTACAGAAATGGGATGGCAAAGAGACAAACTTTGTAAGAGAAATAAAGGATGGCAGAATGGTAATGACTC
TTACCTTTGGTGATGTGGTGGCTGTTCGCCACTATGAGAAAGCATAGAGTTCACCTTACCAGATGTTACGTCTAATGGA
TGGATTAATGTACTGTCCATAATTGAAAGTAGCTTAAATGTACATTTCTGACATGAAAGGTTAATAAAGACTTTTTTGG
GGGGGGAGGGGGGAGTTTTTTTTTTAAGAAACTTTTTGCCATCAAATTGGCAAGCTTTTGCTG
CitationDomowicz MS, Sanders TA, Ragsdale CW, Schwartz NB. Aggrecan is expressed by embryonic brain glia and regulates astrocyte development. Dev Biol. 2008 Mar 1;315(1):114-24. Epub 2008 Jan 22.
CopyrightCopyright © 2008 Published by Elsevier Inc.
CommentsAuthors indicated probe was nucleotide 46-582, taken from NCBI acc# NM_205308.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-34
stage 34
stage 34
Hindbrain
 

Entry 2

GEISHA IdBLBP.Domowicz.2008Data SourcePublication
Complete cDNA Template Probeshow
NCTGACAGCCACAACTTTGACGAATACATGAAGGCGCTGGGAGTGGGGTTTGCGATGCGGCAGGTGGGGAACGTGACTA
AGCCCACAGTGATCATCAGCAGCGAGGGGGACAAAGTCGTGATCAGGACTCAGAGCACTTTCAAAAACACAGAAATCAG
CTTTAAACTCGGCGAGGAATTTGATGAAACCACCCCCGACGACAGGAACTGCAAATCAGTTGTGACCCTGGATGGAGAC
AAGCTAGTTCATGTACAGAAATGGGATGGCAAAGAGACAAACTTTGTAAGAGAAATAAAGGATGGCAGAATGGTAATGA
CTCTTACCTTTGGTGATGTGGTGGCTGTTCGCCACTATGAGAAAGCATAGAGTTCACCTTACCAGATGTTACGTCTAAT
GGATGGATTAATGTACTGTCCATAATTGAAAGTAGCTTAAATGTACATTTCTGACATGAAAGGTTAATAAAGACTTTTT
TGGGGGGGGAGGGGGGAGTTTTTTTTTTAAGAAACTTTTTGCCATCAAATTGGCAAGCTTTTGCTG
CitationDomowicz MS, Sanders TA, Ragsdale CW, Schwartz NB. Aggrecan is expressed by embryonic brain glia and regulates astrocyte development. Dev Biol. 2008 Mar 1;315(1):114-24. Epub 2008 Jan 22.
CopyrightCopyright © 2008 Published by Elsevier Inc.
CommentsAuthors indicated probe came from nucleotide 46-582.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-34
stage 34
stage 34
Hindbrain
 

Entry 3

GEISHA IdFABP7.Olivera-Martinez.2014Data SourcePublication
Complete cDNA Template Probeshow
CCCGCTGCCATGGTTGAGGCTTTCTGCGCGACGTGGAAGCTGGCGGACAGCCACAACTTTGACGAATACATGAAGGCGC
TGGGAGTGGGGTTTGCGATGCGGCAGGTGGGGAACGTGACTAAGCCCACAGTGATCATCAGCAGCGAGGGGGACAAAGT
CGTGATCAGGACTCAGAGCACTTTCAAAAACACAGAAATCAGCTTTAAACTCGGCGAGGAATTTGATGAAACCACCCCC
GACGACAGGAACTGCAAATCAGTTGTGACCCTGGATGGAGACAAGCTAGTTCATGTACAGAAATGGGATGGCAAAGAGA
CAAACTTTGTAAGAGAAATAAAGGATGGCAGAATGGTAATGACTCTTACCTTTGGTGATGTGGTGGCTGTTCGCCACTA
TGAGAAAGCATAGAGTTCACCTTACCAGATGTTACGTCTAATGGATGGATTAATGTACTGTCCATAATTGAAAGTAGCT
TAAATGTACATTTCTGACATGAAAGGTTAATAAAGACTTTTTTGGGGGGGGAGGGGGGAGTTTTTTTTTTAAGAAACTT
TTTGCCATCAAATTGGCAAGCTTTTGCTGTATATTGCAACAAGTCGAAGTTTGCATAAAAACTCTGAAACATTTGCTTT
TTTTTAACAGTAAATGAAAGATATTTGAGTTGCTTTGGAATGGAGATTCAACAAATTAAAAGATTTTTTAAACTTGTA
CitationIsabel Olivera-Martinez, Nick Schurch, Roman A Li, Junfang Song, Pamela A Halley, Raman M Das, Dave W Burt, Geoffrey J Barton, Kate G Storey. Major transcriptome re-organisation and abrupt changes in signalling, cell cycle and chromatin regulation at neural differentiation in vivo. Development 2014 Aug;141(16):3266-76. Epub 2014 Jul 25. DOI: 10.1242/dev.112623.
CopyrightCopyright © 2014. Published by The Company of Biologists Ltd.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession number NM_205308.2).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
 
all
 
  

Mouse

EmageMGI:101916
MGI GXDMGI:101916

Frog

Xenbase967703

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040614-4, ZDB-GENE-000627-1
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