Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

BMP3
bone morphogenetic protein 3

Gene

Official Symbol	BMP3
Official Full Name	bone morphogenetic protein 3
CGNC ID	8280
also known as	bone morphogenetic protein 3\|bone morphogenetic protein 3 (osteogenic)
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001034819
Polypeptide	NP_001029991
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.32076

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	651	ENSG00000152785		MIM:112263
Mouse	110075	ENSMUSG00000029335	All phenotypic alleles (3):Targeted, knock-out(2) Targeted, other(1)	MGI:88179
Xenopus	100497890, 399354			483483
Zebrafish	777717		ZDB-GENE-030131-7192	ZFIN:ZDB-GENE-030131-7192

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	422581
Ensembl Gene
KEGG	gga:422581

Entry 1

GEISHA Id	BMP3.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	TTATAAAAGCTTGCGGCCGCAGAATATGTCTGGAGGCTGTTCTCATCGTG
Reverse cDNA Template Primer	GCTCTAGAAATTAACCCTCACTAAAGGGGCACAATACCGTGGCTCATTCC	cDNA Template Length	670
Complete cDNA Template Probe	show TTTATAAAAAGCTTGCGGCCGCAGAATATGTCTGGAGGCTGTTCTCATCGTGGGCACAGGGAAACCTGAAATTCAAATA CATCTTTCGGTGGTGGACCTTTCCATCTGTTGGGAACCAGACCCGGGGTCTGGGCCATTTCCTAATAAACATCTCCAGC TCTTACAGCGATGTCCTTTCCTGGCAGTGGAAAGATATCACTCAGGTCCTGCACAAAGCAAAACAGAGCAATGAACTTC TGATTGGTGTCAAAATGGATTCAACCAGCCGTCACCTGTGGAGGAGGGCACCATTTCACTATGAGCCCTACATTCTGAT ATATGCCAATGACTCTGCCATTTCAGAGCCAGAAAACGTTGTTTCCAGTTTGCAAGGGCACCACAATCCTTTGGCAAGG GTCTTCCCTAGGCCAGAAATCACATGAGGAGCAGCCTTGGAAAGCGGCGGCGAAAACGCTCCACCAACGTCCTGTTGCC ATTGCAGAACAACGAGCTTCCAGGAGCCGAGTACCAGTACAATGAGGATGAGAGGTGGGAAGACAGAAAACCGTACAAA ACTTTCCAGCCTCGACTGGCCGAGAGGGCAAAGAGTAAGAAAAAGCAGAGGAAGAACCACCACCAGAAGAGCCAGACTC TCCAATTTGATGAGCAGACCCTTGAAGAAGGCGAGGAGGAAGCCAGTGAATGAGCCACGGTATTGTGCCCCTTTAGTGA GGGTTAATTTTCTAGAGCAA

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

stage 6

Area Pellucida
Primitive Streak

7-12

stage 8

stage 10

stage 12

Anterior Intestinal Portal
Area Opaca
Area Pellucida
Blood Vessels
Head Mesenchyme
Neural Plate/Tube
Somites

Staining in neural tube may be due to trapping.

13-18

stage 14

stage 15

stage 16

Neural Plate/Tube
Somites

19-24

stage 20

Head Mesenchyme
Pharyngeal Arches and Clefts
Somites

25-26

stage 26

Atria
Limb Buds
Pharyngeal Arches and Clefts
Somites

Entry 2

GEISHA Id	BMP3.Gamer.2008	Data Source	Publication
Complete cDNA Template Probe	show `CCACGGTATTGTGCCCGACGCTATCTCAAGGTGGATTTGGCTGACATTGGCTGGAGCGAGTGGATTATTTCCCCGAAAT CCTTTGATGCCTATTACTGCTCAGGGGAATGTCAGTTCCCAATTCCAAAGGCCTTGAAGCCATCCAACCATGCCACCAT CCAGAGCATAGTGAGAGCTGTCGGCGTTGTCCCTGGAATTCCTGAGCCGTGCTGCGTTCCTGACAAAATGTCATCTCTC AGCATCTTATTCTTCGATGAAAATAAGAATGTGGTTCTCAAAGTGTACCCCAACATGACAGTAGAGTCCTGCGCGTGCA GATAACGTCTCAGAAGAGCCTTTAGAAGCACTAAGGTGATCACTCGCCATTCACTGGGGTTCTTTTCATGATTCCTACT TTTGGTTTGCACTGCCAAGGCATTTCCTTCCAGGCGGGAAAAA`
Citation	Gamer LW, Ho V, Cox K, Rosen V.. Expression and Function of BMP3 During Chick Limb Development. Dev Dyn. 2008 June; 237(6): 16911698.
Copyright	Copyright © 2008 Wiley-Liss, Inc.
Comments	The cDNA template for the BMP3 antisense probe was obtained from cDNA clone ChEST497i16 as described in Gamer et al. Thus the sequence below was obtained from NCBI (acc #BU396641.1).