GEISHA - A Chicken Embryo Gene Expression Database
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BOC
BOC cell adhesion associated, oncogene regulated

Gene
Official SymbolBOC
Official Full NameBOC cell adhesion associated, oncogene regulated
CGNC ID11276
also known asbrother of CDO|Boc homolog, Brother of CDO precursor
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_416581
PolypeptideXP_416581
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.7901
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human91653ENSG00000144857MIM:608708
Mouse117606ENSMUSG00000022687All phenotypic alleles (6):Targeted, knock-out(2) Targeted, other(4) MGI:2151153
Xenopus780199, 443556923397
Zebrafish334628ENSDARG00000074335ZDB-GENE-030131-6560ZFIN:ZDB-GENE-030131-6560
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene418361
Ensembl Gene
KEGGgga:418361

Entry 1

GEISHA IdBOC.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-TCTCGCCTCTCTGTGGAAATCC-3'
Reverse cDNA Template Primer5'-AATTAACCCTCACTAAAGGAAGTATGGTAGGTCGCTGGAACGG-3'cDNA Template Length584
Complete cDNA Template Probeshow
TCTCGCCTCTCTGTGGAAATCCCAGACCTGGAAAAAGGCTTTTCCTATAAGTTTCGTGTCCGAGCACTGAACATCCTGG
GAGAAAGTGAGCCCAGTGCAGCATCTCGGCCATATGTGGTGTCTGGGCACAACAACCGAGTCTACGAGCGCCCTGTGGC
TGGGCCATACATCACCTTTACAGATGCCATTAATGAGACCACCATCATGCTGAAGTGGATGTATATCCCAGCCAGCAAC
AACAACACTCCCATCCATGGCTTTTACATCTACTACCGCCCCACAGACAGTGACAATGACAGCGACTACAAGAAGGATG
TGGTAGAAGGAGATCGATACTGGCACTCCATCAGCCACCTACAGCCAGAGACCTCATATGACATCAAGATGCAGTGCTT
CAATGAAGGTGGTGAAAGCGAGTTCAGCAATGTGATGATCTGTGAAACTAAAGCTCGAAAATCTCTTGGTCTGCCGGGT
CGTCTTCCACCCTCAACAGTGGCCCCTCAGCAGCATCCCCCACTTAGCGGCGGGCACAGTGGCCTGGGGACAGGAGCCA
TGGTGGCCCGTTCCAGCGACCTACCATACTT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Unlabeled
 
7-12
stage 7
stage 7
stage 10
stage 12
Head Mesenchyme
Mesencephalon
Somites
Unlabeled
dorsal midbrain
13-18
stage 18
stage 18
Diencephalon
Mesencephalon
Metencephalon
Telencephalon
 
19-24
stage 19
stage 19
stage 22
stage 22
stage 22
stage 22
stage 22
stage 22
Cranial PNS
Dermatome
Dermomyotome
Diencephalon
Forebrain
Foregut
Hindbrain
Leg Mesenchyme
Lung
Mesencephalon
Mesonephros
Metencephalon
Midbrain
Myelencephalon
Neural Plate/Tube
Oral Pharynx
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Ganglia and Nerves
Telencephalon
Trunk Mesenchyme
Wing Mesenchyme
 
25-27
stage 27
stage 27
stage 27
stage 27
stage 27
Diencephalon
Hindbrain
Intermediate Mesoderm
Isthmus/MHB
Limb Buds
Mesencephalon
Midbrain
Neural Crest
Trunk Mesenchyme
 

Entry 2

GEISHA IdBOC.Aglyamova.2007Data SourcePublication
Complete cDNA Template Probeshow
GGAGCAGCATTCATCTTCTACAACGTGCAGGTGTTTGAGCCCCCAGAGGTCACCATGGAGCTGTCCCAGCAGATCATTC
CCTGGGGCCAGAGCGCCAAGTTCACCTGCGAGGTGCGAGGAAACCCCCAGCCCTCAGTCATGTGGCTGCGCAATGCTGT
GCCCCTCTCTGCCAGCCACCGGCTCCGGCTGTCCCGCCGGGCGCTGCGAGTGGTCAGTGTGGGGCCTGAAGATGATGGC
ATTTACCAGTGCATGGCAGAGAATGAGGTTGGAAGTGCACAAGCCATGGTGCAGCTGAGGACGGCCCAGCCAGGAGCTA
CCCTCAACCCTGGGCAAGATGCTCAGCTGGATTCAGCTCGGCCTCCAACACCGCCTTCCAGGGACAGTGCCTTAAAGCT
GCCTCTGGATAAAGGTAGTCCACCAAAGCCTGTGACCA
CitationAglyamova GV, Agarwala S. Gene expression analysis of the hedgehog signaling cascade in the chick midbrain and spinal cord. Dev Dyn. 2007 May;236(5):1363-73
CopyrightCopyright © 2007 Wiley-Liss, Inc.
CommentsSequence was obtained from NCBI (XM_416581). The primer pairs used were those given in the publication: 5'-GGAGCAGCATTCATCTTCTACAACG-3' as BOC-forward; and 5'-TGGTCACAGGCTTTGGTGGACTAC-3' as BOC-reverse.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 13
stage 18
Midbrain
Tectum
25-26
stage 26
Midbrain
Tectum

Entry 3

GEISHA IdBOC.Singh.2016Data SourcePublication
Complete cDNA Template Probeshow
CAAGATTGAAACAGCAGCACAAGGGACATTGCAAGACATGGGTCCAAATGAAGCTGCCACCAAGATCGATCAGCTTCCT
GCAGTGAGGGCTTCTCCTTGCCCACAGGAAGGCATGTCCCAGGAACACACTCCTGTGAGTGGACCGGAGTTATGCACTC
TGCCTGATCAACTTAAACAAACTTTCACATAGACGCCATCTGCAGCTGCATATTTGTAAAGACAAACCCATGCTTTAAC
AACTAAAATAAAGGCTTAAGTGTTTTCTGTGGCTGGTTGTATGCTAAAACCTTCCACAGAATGAACCTACATTCTTTTT
CCTTGCAGAAACATGGCAAAAAGGACACCTGAGGGAAGGTGACACTTTCCTGCAGTTATAGTTTTCCTCTATGTCACCT
ATGTGAATCTTTTCAGTGCTGAGCTTAAGAGAAAAGGGCTGGCTGCTATCTATGGCAACTAAGTGATATAAAACCTCTT
GTGGGGAGCAGAGCCGGCGAAAATTTTCATTTACGTCTAAGTATAGATCATTNTGCTTTCTTTTTTCCCCTGAGAAAAT
AGAATGCTCAGCACCTTCACAGGGACTCACTGAAAAGGCAGGCAGCACAAATACCATTTGTTTGCTTGTACTGGGGCCA
GCAAAGCAGCAGCAGTTCTTGTGCCTGGCTGGGACACAACTGGATCCTGGCTAAAGGTGCACCAGACAGGAACAATGAC
CAGGGAGGGGAGAGGG
CitationSingh PN, Ray A, Azad K, Bandyopadhyay A. A comprehensive mRNA expression analysis of developing chicken articular cartilage. Gene Expr Patterns. 2016 Jan;20(1):22-31.
CopyrightCopyright © 2015 Elsevier B.V. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information provided in the publication as described in Singh et al. 2016. The probe was synthesized from cDNA clone ChEST870a16.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 28
Limb Buds
 
31-38
stage 31
stage 34
stage 36
stage 38
Limb Buds
 
all
 
  

Entry 4

GEISHA IdBOC.Kahane.2013Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GAAGTTGCTGTCGGGATGCTGGGAAGGGGTCAGCGGACGCGCCAAGGAGCTGACAAGAGAGGAGCGACATCCCGCCAGC
CCGTGCCATGTGCGGCTTGGGGTTGTAGTGGCGCAGGAAGCTGCTTCCACACCTCTACCACATCCCCTGAGGCAGCTTA
TGGGACCCTTCTCTGGGCGCCTCTGCCCCAGGAGACATTGCATGGGATGGCAATGACACGTGGAAAGAAGAGACCCATG
TCCGCCATCCTTTGCCTCCTCCTCGCAGCCACGAGCTGCTTTGCCAAACTGAGTGAATCTCTGCAAGTCACTGTGCAGC
CTGCCTCCACCGTTCAGAAGCCTGGGGGCTCGGTCAGCCTGTGGTGTGTTGTGGACCCCCCAAGAGTGAACCTCACCTG
GAGACTGAATGGAAAGGAGCTGGATGGATCAGACGAGATGCTGGGGATCCACATCGAGCAAGGGAAACTCATTATCACA
GCTCTCAACAACCACACCGTGGGGCGATACCAGTGCATTGCTCGTGTGCCCGAAGGAGTCATTGCCAGTGTCCCCGCAG
TGGTCACCTTGGCTAATCTCAAGGATTTCAAGTTTGATGGCCCTCACGTGATTGAGGTGGATGAAGGCAACACGGCTGT
CATCGCCTGTGACCTGCCCGAAAGCCATCCCAAGGCCCAGGTCCGCTACAGCGTGAAGCATGAGTGGCTGGAGGCCTCC
CGAGACAATTACCTTATCATGCCATCCGGGAACCTTCAGATTGTCAATGCAAGCCAAGAAGATGAGGGGACTTATAAAT
GTGCTGCCTACAATCCTGTGACACAGGAGGTGAAAACCTCAGTCTCTAGTGAGAGGCTCCGCGTGAGACGCTCCACAGC
GGAGGCCGCTCGGATAATCTATCCGCCTGAAGCTCAGACCATCATTGTCACCAAAGGCCAAAGCCTCATCCTGGAGTGT
GTGGCCAGTGGGATCCCCCCGCCCCGTGTCACCTGGGCCAAAGATGGCTCCAGTGTCTCAGCGTACAATAAGACACGGT
TCCTGCTCAGCAACCTTCTGATTGACCCTACCAGTGAGGAGGACTCAGGCACCTACAGCTGCACGGCTGACAACGGAGT
TGGTGAGGCTGGAGCAGCATTCATCTTCTACAACGTGCAGGTGTTTGAGCCCCCAGAGGTCACCATGGAGCTGTCCCAG
CAGATCATTCCCTGGGGCCAGAGCGCCAAGTTCACCTGCGAGGTGCGAGGAAACCCCCAGCCCTCAGTCATGTGGCTGC
GCAATGCTGTGCCCCTCTCTGCCAGCCACCGGCTCCGGCTGTCCCGCCGGGCGCTGCGAGTGGTCAGTGTGGGGCCTGA
AGATGATGGCATTTACCAGTGCATGGCAGAGAATGAGGTTGGAAGTGCACAAGCCATGGTGCAGCTGAGGACGGCCCAG
CCAGGAGCTACCCTCAACCCTGGGCAAGATGCTCAGCTGGATTCAGCTCGGCCTCCAACACCGCCTTCCAGGGACAGTG
CCTTAAAGCTGCCTCTGGATAAAGGTAGTCCACCAAAGCCTGTGACCACTCCACTGGCAGCGTTTTCACAGTGCTCAGC
CAACAAGGAGCTGGTGTCTCCAGCTGAGGCCCCCATCATCCTCAGTTCTCCCCGGACATCCAAAACAGACAGCTACGAC
CTAGTGTGGAGACCCCGGCCTGACAGCAGGGCCCCAATCCTCTACTATGTGGTGAAGCATCGCAAGGTGGCCAACGCCT
CAGACAGCTGGGCAGTGAGAGATGTGCCAGCCTCGCAGCACCGCCTGACACTCACCAGGTTGGATCCTGGAAGCCTCTA
CGAGGTGGAGATGGCCGCTCACAACTGCGCTGGCGAGGGACAGACGGCCATGGTGACCTTCCGGACTGGTAAAGGCCGG
CGCCCAAAACCAGAGATTGTTGCCAGCAAAGAACAGCAAATCCAGAGGGATGACCCAGGCACGAGCACTCAGAGCAGCA
ACCAGTCTGACAACAGCCGGCTGTCCCCTCCAGAGGCACCAGATCGTCCAACCATCTCCATGGCATCAGAGACATCTGT
GTATGTGACCTGGATCCCCCGTGGGAATGGTGGATTTCCTATCCAGTCTTTCCGCGTGGAATATAAGAAACAGAAGAAG
TCGGGAGACTGGGTCCTGGCCACCAGTGACATTCCTCCCTCTCGCCTCTCTGTGGAAATCCCAGACCTGGAAAAAGGCT
TTTCCTATAAGTTTCGTGTCCGAGCACTGAACATCCTGGGAGAAAGTGAGCCCAGTGCAGCATCTCGGCCATATGTGGT
GTCTGGGCACAACAACCGAGTCTACGAGCGCCCTGTGGCTGGGCCATACATCACCTTTACAGATGCCATTAATGAGACC
ACCATCATGCTGAAGTGGATGTATATCCCAGCCAGCAACAACAACACTCCCATCCATGGCTTTTACATCTACTACCGCC
CCACAGACAGTGACAATGACAGCGACTACAAGAAGGATGTGGTAGAAGGAGATCGATACTGGCACTCCATCAGCCACCT
ACAGCCAGAGACCTCATATGACATCAAGATGCAGTGCTTCAATGAAGGTGGTGAAAGCGAGTTCAGCAATGTGATGATC
TGTGAAACTAAAGCTCGAAAATCTCTTGGTCTGCCGGGTCGTCTTCCACCCTCAACAGTGGCCCCTCAGCAGCATCCCC
CACTTAGCGGCGGGCACAGTGGCCTGGGGACAGGAGCCATGGTGGCCCGTTCCAGCGACCTACCATACTTGATCGTAGG
CGTCGTCCTGGGCTCTATTGTACTCCTCATTGTGGCCTTCATCCCCTTTTGTCTTTGGAGAGCCTGGTCCAAGCAGAAG
CAAACCATTGACATGGGCTTTCCAGGAGCTGGACTGTTGGTGTCATCCTGCCAGTACACGATGGTGCCTCTGAGGGGCA
TTTCTGCTCCTCGTGCCAATGGACATCCCTATGTTAATGGGCAGCCCTATGCCAGTGGGGCACATCTGAACGGCATCTG
CCCCTCAGCAGGAGTGGACTATGTGAGCACGAAGCCCCAAGATTACAGTCCAGATGACATGCAGCAGTCACACGAGGAG
ACCAATGCCTTGCTGCAGGCGAGAGTGCTGCAAAATGGGAATGCCCACCAAGACTACCAGCCCACCAGATTGCCCAGTT
CAAGACCAGAAGACAGCTCTTTCCTGTACAGTCTCCCAGATGACTCCACTCACCAACTTCTGCAGCCACAAGATGACTG
TCCACACCTTCAAGAGCGCTTCGTTGGCCTGCATCATCCAGTGATGGGCAACAAAGTGGGAGGTTCTAGTTTGGATCCT
CGACGAGATCCACTGTTTCACCATGGAAGCCCGTTCTGCCTAGGCCTAGTGCCAGTGGAAGAGGTAGAAAGACTAGACT
GCTGCCAGTCCAGAGGAGACCTCCATCCCCCGGCTCCAGTGCTCACATCTTTGAGTCAGGACCTACCGGGACATCTGAA
CAGCAGCTCACCATCGCTGAGGCCCTTGGAGACTCATTCTCCTATCAGTTAGGGACCAAGCTGCCTTTTGCAAAAGACT
TATTCTAAAGAGAAAAAAAAAAAAGAATGGGTATTTATTTTTGTATAACACCTCTATTTATATATTTATGCACTTGTAT
ATAGATGTATATGTGCCTTTTATAATGCTATGGAGACAGAAGGCATCTTCAGCAAGGCAACAGGAGGGCCTGAGAAACA
AGGCAACAGCTACCTGTGGCACTGGGCTGTTCATCAGAGCACAAGATTGAAACAGCAGCACAAGGGACATTGCAAGACA
TGGGTCCAAATGAAGCTGCCACCAAGATCGATCAGCTTCCTGCAGTGAGGGCTTCTCCTTGCCCACAGGAAGGCATGTC
CCAGGAACACACTCCTGTGAGTGGACCGGAGTTATGCACTCTGCCTGATCAACTTAAACAAACTTTCACATAGACGCCA
TCTGCAGCTGCATATTTGTAAAGACAAACCCATGCTTTAACAACTAAAATAAAGGCTTAAGTGTTTTCTGTGGCTGGTT
GTATGCTAAAACCTTCCACAGAATGAACCTACATTCTTTTTCCTTGCAGAAACATGGCAAAAAGGACACCTGAGGGAAG
GTGACACTTTCCTGCAGTTATAGTTTTCCTCTATGTCACCTATGTGAATCTTTTCAGTGCTGAGCTTAAGAGAAAAGGG
CTGGCTGCTATCTATGGCAACTAAGTGATATAAAACCTCTTGTGGGGAGCAGAGCCGGCGAAAATTTTCATTTACGTCT
AAGTATAGATCATTTTGCTTTCTTTTTTCCCCTGAGAAAATAGAATGCTCAGCACCTTCACAGGGACTCACTGAAAAGG
CAGGCAGCACAAATACCATTTGTTTGCTTGTACTGGGGCCAGCAAAGCAGCAGCAGTTCTTGTGCCTGGCTGGGACACA
ACTGGATCCTGGCTAAAGGTGCACCAGACAGGAACAATGACCAGGGAGGGAGAGGGCAGAAGAAGCAAGAGCAGCTGCA
GGTTGTTTCAGCTGTTTAATTAAAAAAGAGCAGCCAACCCCAAAGCTCTGTGTGCTGTCAGAAACTTTGCAATGGAAGA
ACACTGCATCAAAACCCCTCCACTTGGAGGTTAAATAAACTTTTCACAGTAAGACAAAGTAAGCACTATCAATGATCAC
TCACTGTCAACATCCCAAATGCAAGAGGAAAAAAATAGAAAGAATAAAACCAGAAAACAAAGACTAGCTCTACTCTATA
ATGCATGCAAGTCAGTGAAATTACAGGCTAACTTCACATTTGCTATAGTCTTCTTGTTCTAAATAAAAGGGACGTCCTG
CACTAGTTTCCCACCTCCACAGAGCAGGGTCAAGCCTCTCACTGGTGCCATACTCTTCTAGCATTGTAGGCCCTGAGGA
AAAAGGTCCCCTTGTTTTCCCCAAACATAGTGCTTCCCATTTCTTTTTACAATATTCCAACTCTGTTAGGAGACAACTA
TCATTGCAGTGGGAATATTCAACAAGTAACAAGATGCACTCTTAAGACAGACGTCCTTTACCAATTACTGAGAACCTGG
ATGCTATAGATAGAATTGGCCAGTTTCCAGCCTTCAAAAACCATTTTGTACTGAGAGCTAAGAACAGGTGTGCACATAC
AAACACACTCCAGTGCAAAGCTCTGCAATGGACTGACAACAGCACTTACTGGTTGCAATTGCACTTTTTAATGCCCTAT
CCACCACTACAGCCATATTTGGATAGAGGAAACAAATTTAATCCTTTACAATGAAACCTCTTTGTAACCAAAACAATAA
ATTTCACACTTGCAAGTATTACTGTTGCCATAGTTCAATGTCTGCTTTTAAGGGACACCTGAAGTGTTAGTTACCATTC
ATGGTTTAAGAACAGGGAATATTTGATCTGGTGCCTCCAGGTCCTGTGGTGATGAAGGCTGTAGAAACTGATTGTTCCT
GGTCAGGAGACTGAGCTGTTCAATTAAATGCCCATCTTTTCTGCTTAGAAAATTGATTTCTTCTCTTAGGATGGCTTCG
TCATGAGCCAAACGTTTCAGCTGTGACTCCATCCTGGCCTTCTCTTTCATATCAGCAGTTCGGGGCCCCTGAAATTCTA
CTCCCTGTAAGGAGAGAAAAAAAATGCAAGAACTAATGGTGGAAAATTTATTTCATCTGGGAAAGTGAAGCATACCAAG
AAGTGGGACAGTGACTGCTCCACTCCTCACTCAGAACTACTTGGAAGACAGAGTGAGAGACCTTTATCTTTGGCTCAAT
CTGTTACCAATGGCTGCCTTATTCCCTAATAAAGAGAAA
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (XM_025143712.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-17
stage 17
Dermomyotome
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.7901

Mouse

EmageMGI:2151153
EurexpressMGI:2151153
MGI GXDMGI:2151153

Frog

Xenbase923397

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-6560
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