GEISHA - A Chicken Embryo Gene Expression Database
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BTF3
basic transcription factor 3

Gene
Official SymbolBTF3
Official Full Namebasic transcription factor 3
CGNC ID10153
also known astranscription factor BTF3
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_423823
PolypeptideXP_423823
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.39036
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human689ENSG00000145741MIM:602542
Mouse218490ENSMUSG00000021660All phenotypic alleles (3):Targeted, other(2) Gene trapped(1) MGI:1202875
Xenopus549451, 495200985802
Zebrafish556625ENSDARG00000035400ZDB-GENE-030131-8731ZFIN:ZDB-GENE-030131-8731
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene426154
Ensembl GeneENSGALG00000013512
KEGGgga:426154

Entry 1

GEISHA IdChEST63c10Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GCGCGGTGTGCCTCCCTTCCGGCCGCCATCTCGCTCCCCGCCGCGTGCTGTGCCCGGACTCGCACCCCGCCCGCTCCGA
TCCCGGCGCTCCGGCACTGCTACGCCCGCCCCTGGAAGATGAAAGAAACCATCATGAACCAGGAGAAGCTCGCCAAGCT
CCAAGCCCAAGTGCGCATCGGCGGCAAGGGTACTGCCCGCAGAAAGAAGAAGGTTGTCCATAGAACAGCCACAGCAGAT
GATAAGAAACTTCAGTTTTCCTTAAAGAAACTTGGAGTCAACAATATTTCTGGCATTGAAGAGGTAAATATGTTTACCA
ACCAAGGAACAGTCATTCACTTCAATAACCCTAAAGTTCAGGCATCTCTGGCTGCTAACACTTTCACTATCACTGGCCA
TGCTGAAACAAAGCAGCTGACAGAAATGCTTCCCAGTATCTTAAATCAGCTTGGAGCTGACAGTCTGACCAGCCTGAGG
AGATTGGCGGAAGCCTTACCCAAGCAACCTGTGGATGGAAAAGCACCTCTTGCTACTGGTGAAGATGATGATGATGAAG
TTCCAGATCTTGTTGAAAACTTTGATGAAGCTTCAAAGAACGAAGCAAACTGAAATAAATGTCACTTTCTGAATAAACT
TAAAACTTGAAAAAGCTACATGGAGCTGCTATTTTATATTGTGACTGCTTTTTTTTTTTTTTTCTTCTGAGATCTTGGG
ATCTGTAACACTTGGAAATTCTTTGAACCTGCAGCTCCTTCTAGTTATTGCTTGTACACGATATTGTTTTTGTGGCCCA
GTTGAACAGACCTCTGCTTTGAAATATGATTGCTAATAAATTTCTTCCTAGACACAGTTTTTGAGTAACTTGTATACAA
GCAAAACCCTATCTTTAATGAACTTTGACNTANCATAAAAAATATATTAG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
Paraxial Mesoderm
 
19-22
stage 20
stage 20
stage 20
stage 22
Face Mesenchyme
Myotome
Pharyngeal Arches and Clefts
hand transected

Entry 2

GEISHA IdBTF3.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-CCGCAGAAAGAAGAAGGTTGTCC-3'
Reverse cDNA Template Primer5'-ATTAACCCTCACTAAAGGATCCACAGGTTGCTTGGGTAAGGC-3'cDNA Template Length316
Complete cDNA Template Probeshow
CCGCAGAAAGAAGAAGGTTGTCCATAGAACAGCCACAGCAGATGATAAGAAACTTCAGTTTTCCTTAAAGAAACTTGGA
GTCAACAATATTTCTGGCATTGAAGAGGTAAATATGTTTACCAACCAAGGAACAGTCATTCACTTCAATAACCCTAAAG
TTCAGGCATCTCTGGCTGCTAACACTTTCACTATCACTGGCCATGCTGAAACAAAGCAGCTGACAGAAATGCTTCCCAG
TATCTTAAATCAGCTTGGAGCTGACAGTCTGACCAGCCTGAGGAGATTGGCGGAAGCCTTACCCAAGCAACCTGTGGAT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 6
Early Endoderm
Early Mesoderm
Epiblast
Extraembryonic Mesoderm
Primitive Streak
 
7-12
stage 7
stage 7
stage 7
stage 8
stage 9
Blood Islands
Early Endoderm
Early Mesoderm
Extraembryonic Mesoderm
Forebrain
Head Mesenchyme
Headfold
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Primitive Streak
Sinus Venosus
Somites
extraembryonic ectoderm
extraembryonic endoderm
extraembryonic mesoderm
 
13-18
stage 13
Blood Islands
Extraembryonic
Head Mesenchyme
Heart
Intermediate Mesoderm
Neural Plate/Tube
Somites
Widespread Expression
 
19-24
stage 19
stage 19
stage 19
stage 19
stage 19
stage 23
stage 23
Allantois
Dermatome
Ectoderm
Eye
Forebrain
Foregut
Head Mesenchyme
Heart
Hindbrain
Leg Mesenchyme
Limb Buds
Lung
Mesonephros
Midbrain
Myotome
Nasal Placode/Nerve
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Somatic Mesoderm
Spinal Cord
Ventricles
Widespread Expression
Wing Mesenchyme
dorsal mesentery
25-27
stage 25
stage 25
stage 25
stage 27
stage 27
Allantois
Aorta
Cardinal Veins
Dermatome
Ear/Otic Placode
Foregut
Head Mesenchyme
Heart
Leg Mesenchyme
Lung
Mesonephros
Midbrain
Myotome
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Somatic Mesoderm
Spinal Cord
Stomach
Tail
Ventricles
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.39036

Mouse

EmageMGI:1202875
EurexpressMGI:1202875
MGI GXDMGI:1202875

Frog

Xenbase985802

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-8731
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