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JAG1 The human orthologue of this gene is associated
Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol JAG1 Official Full Name jagged 1 CGNC ID 6856 also known as protein jagged-1|C-Serate-1 protein|jagged 1 (Alagille syndrome) gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id JAG1.UApcr Data Source GEISHA ISH Analysis Forward cDNA Template Primer GGTGAAAGGTGAGGTGGCGTC Reverse cDNA Template Primer ATTAACCCTCACTAAAGGGGGCAGGAACACTGGTATTTATCG cDNA Template Length 906 Forward cDNA Template Probe show TTTTTATCGGCAGAATACNGGGCAGTGTTGCTGCAGGTACACCATTCAACAGGGTGGGTGGGTTCCACAGTAGTTCAGG
Entry 2 GEISHA Id SERRATE1.Sanders.2002 Data Source Publication Complete cDNA Template Probe show ATGCGTGCGGCCCGGCGGGCGGCGGCGCGCTCCCTCGTCCTCTTCCTGGCCCTGCTGGGGCTGCGGGCTCAGGTACGTT
Citation Sanders TA, Lumsden A, Ragsdale CW. Arcuate plan of chick midbrain development. J Neurosci. 2002 Dec 15;22(24):10742-50. Copyright Copyright © 2002-2011 by the Society for Neuroscience Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI, also known as" Jag 1". The cDNA sequence is the predicted sequence (acc# XM_415035.2).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-28 stage 28
stage 28
Mesencephalon Midbrain
Entry 3 GEISHA Id JAG1.Paxton.2010 Data Source Publication Complete cDNA Template Probe show CCTGTGGTCATGGAGGAACTTGCCAAGATCTAGTTGATGGATTTAAGTGTATTTGCCCACCTCAGTGGACTGGCAAAAC
Citation Paxton CN, Bleyl SB, Chapman SC, Schoenwolf GC.
Identification of differentially expressed genes in early inner ear development. Gene Expr Patterns. 2010 Jan;10(1):31-43. Epub 2009 Nov 11.
Copyright 2009 Elsevier B.V. All rights reserved. Comments The cDNA template used to generate the probe was obtained by PCR as described
Jag1 (5-cctgtggtcatggaggaact-3; 5-ggtgccagtgaatcctttgt-3)
Entry 4 GEISHA Id SER1.Sienknecht.2009 Data Source Publication Complete cDNA Template Probe show ATGCGTGCGGCCCGGCGGGCGGCGGCGCGCTCCCTCGTCCTCTTCCTGGCCCTGCTGGGGCTGCGGGCTCAGGTACGTT
Citation Sienknecht UJ, Fekete DM. Mapping of Wnt, frizzled, and Wnt inhibitor gene expression domains in the avian otic primordium. J Comp Neurol. 2009 Dec 20;517(6):751-64. Copyright Copyright © (2002 Wiley-Liss); This material is used by permission of Wiley-Liss, Inc., a subsidiary of John Wiley & Sons, Inc. Comments As insufficient information is provided in publication to verify exact
sequence used to synthesize probe, the sequence below was obtained
from NCBI (acc #X95283.1 ).
no images
Entry 5 GEISHA Id SERRATE1.Daudet.2007 Data Source Publication Complete cDNA Template Probe show ATGCGTGCGGCCCGGCGGGCGGCGGCGCGCTCCCTCGTCCTCTTCCTGGCCCTGCTGGGGCTGCGGGCTCAGGTACGTT
Citation Daudet N, Ariza-McNaughton L, Lewis J. Notch signalling is needed to maintain, but not to initiate, the formation of prosensory patches in the chick inner ear. Development. 2007 Jun;134(12):2369-78. Copyright Copyright 2007 the authors. Published by the Company of Biologists Ltd. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_415035.3).
Entry 6 GEISHA Id C-Serrate-1.Hayashi.1996 Data Source Publication Complete cDNA Template Probe show TTTAAAGTTTGCCTGAAGGAGTACCAGTCGCGGGTCACTGCTGGCGGCCCTTGCAGCTTCGGATCCAAATCCACCCCTG
Citation Hayashi H, Mochii M, Kodama R, Hamada Y, Mizuno N, Eguchi G, Tachi C. Isolation of a novel chick homolog of Serrate and its coexpression with C-Notch-1 in chick development. Int J Dev Biol. 1996 Dec;40(6):1089-96. Copyright © UBC Press Comments The complete cDNA template sequence was obtained from the information in the publication as described in Hayashi et al. 1996. C-Serrate-1 is also known as JAG1 in NCBI.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25 stage 25
stage 25
Diencephalon Limb Buds
Entry 7 GEISHA Id JAG1.Anderson.2019 Data Source Publication Complete cDNA Template Probe show AGACGGGCGGCGGGCGGTGCGTGCGCTGCATGTGCGTGTGTGTATGTGTGTATGTGTGCGTGGTGTGTGTGCGTGTGTG
Citation Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5. Copyright Copyright © 2019 Elsevier Inc. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_040668033 ).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 12
stage 12
Heart
Data from NCBI Unigene EST ProfileGga.53615
Mouse Frog Fruit Fly Zebra Finch Zebrafish
