GEISHA - A Chicken Embryo Gene Expression Database
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CAPN6
calpain 6

Gene
Official SymbolCAPN6
Official Full Namecalpain 6
CGNC ID6059
also known ascalpain-6, calpain-6
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_420313
PolypeptideXP_420313
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human827ENSG00000077274MIM:300146
Mouse12338ENSMUSG00000067276All phenotypic alleles (2):Targeted, other(2) MGI:1100850
Xenopus100494450992086
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene422341
Ensembl Gene
KEGGgga:422341
GEISHA IdCAPN6Data SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGCTAAACCAAATCAGCCCGTC
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGTCAGGTATCCAACCAGTCAGCGcDNA Template Length929
Complete cDNA Template Probeshow
GGGAAATAGAGAGTGGAATGGTGCCTGGAGTGACAATTCTGAAGAGTGGAAGAAAGTCAGCAATGCAGAGCGTAAAAGT
CTGGGACTCACTGTTGAGAATGATGGAGAATTCTGGATGACATTTGAGGACTGGTGTAAGAATTTCACTGATGTGGACG
TCTGCCGGATTGTGAATACCTCCTACTTCAGTATTCACAAGACCTGGGAGACGAAAATGATGCATGGGGCTTGGACAGA
GAATTCAGAGCCCCTGCTAAATCGCTGTGGTGGATGCTTTGATAACATAGAGACCTTCCTTCAGAATCCCCAGTACATC
TTTGATGTTAAGAAGACAGAAGACAAAGTGTTGATCTCATTACAACAGGAGGATCGGCGCAGGAGCAAAAAAGCAGGGA
AAGGAGACAACATCACAATTGGTTTTGAAATCTTCAAGGTAGAAGATAACAGAAGCTATCGACTACACAAGCTGACTGT
GCAGGAGAGAGTGGCCACATCTCCATACATCAATACGCGCAATGTGTTCTTGAAGAAGATCCTTAAGCAAGGCCGTTAC
ATCCTTATCCCAACTACATATCTTCCTGGCATCACTGCAAAGTTTATCCTGAGACTCTTCACTGATGTGCCATCAAAGC
TCAGAGAGCTGACAGCAGATAAGCCTGAAATGACATGTTGGAGTCTTCTTTGTGGCTATCCACGCAGAATCACCCAAAT
CAAAATCCACTCTGCAGAAGGCTTACAGGAGCAAGATGGATCAAGTGGAGCAGATCCCTATGTGCTCATCAAGTGCGAG
AACCAAAAAGTGCGCTCCTCTGTACAACACAATACTACCAGTGCAATTTTCAACACACAAGTCATCTTCTACAGGAAGA
ACATCGACAGTCCTGTCATTGTCCAGGTCTGGAACAGCAACATCTTGTGTGACCAGTTCC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 9
stage 11
Extraembryonic Mesoderm
Foregut
Notochord
Unlabeled
 
13-18
stage 17
stage 18
stage 18
stage 18
stage 18
stage 18
Aorta
Ectoderm
Extraembryonic Mesoderm
Foregut
Head Mesenchyme
Heart
Hindbrain
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
extraembryonic ectoderm
 
19-24
stage 19
stage 19
stage 22
stage 22
stage 22
Amnion
Aorta
Blood Vessels
Cardinal Veins
Ectoderm
Foregut
Head Mesenchyme
Nasal Placode/Nerve
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Ventricles
 
25
stage 25
stage 25
stage 25
stage 25
stage 25
Blood Vessels
Cardinal Veins
Ectoderm
Foregut
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
 

Mouse

EmageMGI:1100850
EurexpressMGI:1100850
MGI GXDMGI:1100850

Frog

Xenbase992086

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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