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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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CARD8
caspase recruitment domain family, member 8

Gene

Official Symbol	CARD8
Official Full Name	caspase recruitment domain family, member 8
CGNC ID	50401
also known as	caspase recruitment domain-containing protein 8
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_415289
Polypeptide	XP_415289
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	416998
Ensembl Gene
KEGG	gga:416998

Entry 1

GEISHA Id	CARD8.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5'-AGACAATGGAGACCACGCTC-3'
Reverse cDNA Template Primer	5'-AATTAACCCTCACTAAAGGTCAGGACAGCAGAGAAAGCC-3'	cDNA Template Length	891
Complete cDNA Template Probe	show AGACAATGGAGACCACGCTCAGCTCCACATTCTCCATCCTTGTGAAGTCTTTGTTGGGAAAAATTATTTCTGTGCCGGT ATCTTTGGACGACACTGTGCTGGACTTAAAGATGAAGCTATTTGCACTGGATAGCTATTTCTACCCCTCTGCGTCAAGA CTGATTCATGATGGCTGGCAGTTGACAGATGAACTAACTCTCAGACATTACAACATTACCTCCAACAGCATTGTAAACC ACGTTCTTAGGCTGCGAGGTGGTGGTTCAGCTGCCTTAAAGGGCAAGGAAGATGTCTCAGCCACAGGTTATCGAGAACC AGAGTTTCAACTACAGAGTGGTTTACCAGGAATTGCCTCAAGCATAAGAATGGAAGATGGTTCGGCAGGTGTCACCTCG ATTATAGAAATGAAGAGCTATCTGGCAGGCATCACCTCAGCAAGTGCAGAGGAAATCCAGAAATGGCCACAGTCAGATG TCCCAGCAGAGGAGAGAAGCTGTCGCTGTGTGAGGCAGGAACTTCAAGAAGTGAGACCGGAGATAGATAACTACATACC GAAGAAACAGAACATATACAAAGCTTGTCTCCCTGGACCAGGCATCTTCCAGTGCTCTGAGACAGGCCTTGTCTTCGAG GTGGAGTCAGCAGCCGGCATCGTGTACAGATATGCCACCTGGAGCACGCATCTGAAAGAGGCTGACCAGAATGTGTGGG TACCTGCTGGGCCTCTTTTCAACATCTGGGCGCTGCCCGGAACCGTGCAGGCTGTGCATCTGCCCCACTTCATCTGCCT GTCAGATGTAGACACCAGTGGATGCTCTATTGCCCATTTTGAATTCCAGAAGATGACCATACAGCAACCAACAAAAGTG ATGGCTTTCTCTGCTGTCCTGA

Stage

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7-12

stage 11

Unlabeled

13-18

stage 16

stage 18

Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Midbrain
Myotome
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme

19-24

stage 22

stage 23

Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Lung
Mesonephros
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme

25-26

stage 26

Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Liver
Lung
Mesonephros
Midbrain
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Wing Mesenchyme

Entry 2

GEISHA Id	LOC416998.Roy.2013	Data Source	Publication
Complete cDNA Template Probe	show AAGTGACACAGGCGGAAGAATTGTGGGCAGCTGCCTGCTCCTGGATGGCCGTCTGTGGCCCTGAGAATCTTGTGCACCC TCACCCACAGACATCACCGTGTTTCAGATGGCTGAAAGAGACAAAGCAAAGACAATGGAGACCACGCTCAGCTCCACAT TCTCCATCCTTGTGAAGTCTTTGTTGGGAAAAATTATTTCTGTGCCGGTATCTTTGGACGACACTGTGCTGGACTTAAA GATGAAGCTATTTGCACTGGATAGCTATTTCTACCCCTCTGCGTCAAGACTGATTCATGATGGCTGGCAGTTGACAGAT GAACTAACTCTCAGACATTACAACATTACCTCCAACAGCATTGTAAACCACGTTCTTAGGCTGCGAGGTGGTGGTTCAG CTGCCTTAAAGGGCAAGGAAGATGTCTCAGCCACAGGTTATCGAGAACCAGAGTTTCAACTACAGAGTGGTTTACCAGG AATTGCCTCAAGCATAAGAATGGAAGATGGTTCGGCAGGTGTCACCTCGATTATAGAAATGAAGAGCTATCTGGCAGGC ATCACCTCAGCAAGTGCAGAGGAAATCCAGAAATGGCCACAGTCAGATGTCCCAGCAGAGGAGAGAAGCTGTCGCTGTG TGAGGCAGGAACTTCAAGAAGTGAGACCGGAGATAGATAACTACATACCGAAGAAACAGAACATATACAAAGCTTGTCT CCCTGGACCAGGCATCTTCCAGTGCTCTGAGACAGGCCTTGTCTTCGAGGTGGAGTCAGCAGCCGGCATCGTGTACAGA TATGCCACCTGGAGCACGCATCTGAAAGAGGCTGACCAGAATGTGTGGGTACCTGCTGGGCCTCTTTTCAACATCTGGG CGCTGCCCGGAACCGTGCAGGCTGTGCATCTGCCCCACTTCATCTGCCTGTCAGATGTAGACACCAGTGGATGCTCTAT TGCCCATTTTGAATTCCAGAAGATGACCATACAGCAACCAACAAAAGTGATGGCTTTCTCTGCTGTCCTGAAGAATCCC AGCTTCTCCCTTCTTGGGGTGGTTTGGAGAAAGTTACGTTCAGCCATTTCTCTCCCTATGCACTCCTTGGTGCTGATCT TCCAGCAGCTCTCTGCTGCAAATACAACCCTGCATCTCTACCTGATCCCAGATGACATTTCTGTGAAGCAGGCCATTGA AAGACAAGAGATGAGCTGGAACTCAAAGCTTATTCCCAAGCCTCCACCATTCAGCCCTCTGTTCTTCGGCAACAGATAC GAGGTTTCCTGTAACACTAAAGTAAAGATTAGACCTGAACCACACTTGCCATTTTGCTACAAGAGTCCAAAGAAACAAC AGTTCTTTGTTGAGATCTACATCAAGAAGATGGCAGAGGAAATTGAATTCTTTATTAGAGATGGACAGAACGACACTGT GGTCTGGAGGGCATCGCTGCGATCAGGTGATATTAGTCTTTTGAGAAATGTCTCCAAGACCCCCCCAGGTGCAGCCTTC ATGAAGAAGCACAAGACAGAGCTTTGTTCCAGGATGGGGCAGCTCTCCTCCATTCTACTAAATTTAAGGGTTGAAGATG TAATCAACAGTGAAGAAGAAGAGGAGGTGCAGGCTCAAAATACAAAACAAAAGAAGAATCAATTTCTGCTGGACCTAGC TGAGAAAAAAGGGCCCAAGGCCCAAGAGAAGCTCTTCCAGGTCCTGCAGATGAAAGACCCATTCCTTGTTGAAGACCTG GAGAACAGCTAAGACTGGGAAAGCAGACAGCTTTTGCTCTCATTGCCACATTTGTCAGGGATTTGTCAGTGCCTGAATC CTGGCCTTTCCATGCAAAATCCATGATGCAAAGCAATGCAAAAGCCTTTTGAGCCATCAAGTGCCAGGCCTGCTTCCCT TACCTGACGCGCTCACTAGAAGTGGACAGCCAGTCACCACTGAGGAGCTGCTGGAACAAGAAACCTGGGTTCCTAATCC AGCGCTCACGTTGTGAAGCCATCCGCCTTCTGAGAACACAGGGCCTTTATAATTCCAGATGCTCCAGGCAGCTGCTGGT TGAGGAGCTCTCATCACAACAGGGACCTCACAGAGTCACAGAACTGTAGGGGTTGGAAGGGACCTCTGGAAATCCCACA GTCCAACAGCAGCTTCCCTACAGTTTATTACTCAGGAAAGCACCCAGGCAGGGTCGGAATATCTCCAGAGAAGGAGACT ATTCAGCTTCTTGGGGCAGATTGTTCCAGTGCTCTGTCACCCTCACAGTGAGCGATTCTATGACTCTGTGAAGTCCAAC CATCATCCTGACCAGTGTTTGTAACTAATTTTGTTATTACACGACATTCCTTATACTGTG
Citation	Roy P, Kumar B, Shende A, Singh A, Meena A, Ghosal R, Ranganathan M, Bandyopadhyay A. A Genome-Wide Screen Indicates Correlation between Differentiation and Expression of Metabolism Related Genes. PLoS One. 2013 May 22;8(5):e63670
Copyright	This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI XM_415289.4