Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

CCNJL
cyclin J-like

Gene

Official Symbol	CCNJL
Official Full Name	cyclin J-like
CGNC ID	1007
also known as	cyclin-J-like protein
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC

Sequence Information

Genomic
RNA	XM_414487
Polypeptide	XP_414487

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	79616	ENSG00000135083
Mouse	380694	ENSMUSG00000044707		MGI:2685723
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	416155
Ensembl Gene
KEGG	gga:416155

Entry 1

GEISHA Id	CCNJL.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5'-GAAAAGACCCTGTGAGTGATACGG-3'
Reverse cDNA Template Primer	5'-AATTAACCCTCACTAAAGGACATTACCAGCAGTTCCTCTGTCC-3'	cDNA Template Length	926
Complete cDNA Template Probe	show GAAAAGACCCTGTGAGTGATACGGAATGTGTATCTGAATGAGAACCATGGAGGAACAGCATCCTTATGTCTTACTCATC CACAGGACGTGGATCTGGATCCACTGACCACTGGAAGCTGGGTGCCTTTGCCAAGGATTGTATCTTTCTCTCTTAATAA GAGAAATAGAAATGCAGTAACATACCTCATGGAATGTAACTTTGAAAGGCACATGCATAGCAACCCTGTGGATACTTTC TAGTCTTCAGTTAGTGACTCACCAATCCGAGTTGGCTGAAAGCTTGAGTTGAAGTGTTATTTCAGGCTAGAGTGTTCCT TGAATTTCTGGTTAAGTAGCAGTGTTCTTGGAGGATGTTATTGAAAACAGAGAGCTCTCTCTCTCTCCCAGGGATGTGT CTTTTGAAGAGTGGCAGCTTATACTACTGGAAGCTTCTACAAAAAGTAGCCTGAAGTGGCATTTGCTTAAACATGGATG CTCTTTGTTTCTGCAGAGGTTGATACATAGTACACTTCAGTTTTCTTTGACCTGGAGTGACAGTGCAGGAGTAAGACTG CATAATAAAAAGGAACAAAGGCTGGAAGACTATCAAATAATCTTTTGTCTTAAAATTATCTTGGAAACAAGATGTGATG CTACTGAACTGAACACAGAACACCGCTCTGCCTTTGCTTATTTGGGGAAAAAAAGTCCAACAGAAACATTAAAAAGCAT AAATGATCTTAGAACTTAACCATGCTGCTGCTTTTTGAGACTGGAGATAATTGTTAGTAAAACTGTTTACAAGCTTTAT CAGGGATTTAATGTTACTTGAAGAAATCTTCTTTGAAAAACTCTCAAACTTCAGTCCCTTCAGTTACTTTTGTAGTTTG GGCTCAACGGTCTGTGGCAGCAGTTCAATTTTAGGACAGAGGAACTGCTGGTAATGT

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-18

stage 13

stage 17

Allantois
Forebrain
Foregut
Head Mesenchyme
Neural Plate/Tube
Notochord
Sclerotome
Unlabeled

19-24

stage 24

Foregut
Head Mesenchyme
Leg Mesenchyme
Mesonephros
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme

25-26

stage 26

Foregut
Head Mesenchyme
Leg Mesenchyme
Lung
Notochord
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Wing Mesenchyme

Entry 2

GEISHA Id	CCNJL.Alev.2010	Data Source	Publication
Complete cDNA Template Probe	show TCCGCTCTGTTCTACGTCCCGGTGGTGCCCCGTCTGCCTCCCAGAGCTTTGTCTGGATGGGAAGAAAAAGGATGGAGGA GCAGTGGTGGAGAGGGGAGCTGGCGGCAGACATCCATCAGACCCTGAGGACGAAGGAACTTAACCTCCCTCTGTATAAG GCCCATTCACCACAGATTGGGATGCGCCGTTACTTCATTGATCTCTTGACCGTCCTCAGCAACCGTTGCAGTCTCTGCC CTACAGCCCGGCACCTCGCCATCTACTTACTGGACCTCTTCATGGATCGCTATGATATCACTGTCAAGCAACTGTACGT CACTTCGTTTGCCTGTCTTCTCCTAGCAAGTAAATTTGAAGAGAAAGAAGATAAAGTTCCGAAGTTGGAGCACTTAAAT AACCTGGCATACATGTGCAATGTGAATGTGGTATTGAGCAAGAAAGATTTGCTTAGAATGGAAATGCTGCTTCTGGAAA ACTTCAACTGGAACCTGTGTATACCAACAGCCGCACACTACATTGACTACTACCTCTATGCATCTATTGGTGAGAATGA CCTTCACAACGGCTGGCCGATCACCTCACTAACCAAAGTCAAAGCATTTATGGAAAAATATGCATATTATTTCCTTGAT TTCTCAGTGCAAGATCACAGTTTCCTTCATTTCCGTCCATCTCTGATTGCTGCAGCTTCTGTGTGTGCCTCACGCATCT GTATGCAGATTTCTCCTGCCTGGACAACACAGCTTGAATTGCTCACGTGTTACTCCTGGGAGCACCTTGCCCAATGCAT TGAAATGATGCTCATATATTATGAGAATGATATCAAAGAAGCCAGTAACATAAAAAAGGAAGTAACAATCCAACATCAG CAACAGGAAGTAATGGAAAACCTGAGACATGGAGCCACTACTCAAGTTCTATTTCAGCAATCTAGTTACCATCCGTTAG CCCAGCATTCAGCTAGTCTTTCCCAGTTCCAGTCACCAGTGCAGGATTTGTGCTCTGCTTATCGTGACTCCTTACAGGC ACACAGGCCCAGCACTCTGCTTTCTGGGAGTGCTGACAGCTCATTGCACTCCTATGCTGCTCTTGGCCAGCCTGCAGCC ATCTGCCCAGTCTCTGCACGTGCAATGCCTATTGCTGTGCAGGTGGCCTTAGGAACAGAGCCCAGCCACTGCATTTCCA TGGCTTACGGTAGTAGTTACTTCAGTGGCTGCCATTCATATCCAGCCGGGTGTTTTGATGGATAAATACTGGTGTGAGA AAAAGGTGACACGAGTGAAAACTGAAGAAAAGACCCTGTGAGTGATACGGAATGTGTATCTGAATGAGAACCATGGAGG AACAGCATCCTTATGTCTTACTCATCCACAGGACGTGGATCTGGATCCACTGACCACTGGAAGCTGGGTGCCTTTGCCA AGGATTGTATCTTTCTCTCTTAATAAGAGAAATAGAAATGCAGTAACATACCTCATGGAATGTAACTTTGAAAGGCACA TGCATAGCAACCCTGTGGATACTTTCTAGTCTTCAGTTAGTGACTCACCAATCCGAGTTGGCTGAAAGCTTGAGTTGAA GTGTTATTTCAGGCTAGAGTGTTCCTTGAATTTCTGGTTAAGTAGCAGTGTTCTTGGAGGATGTTATTGAAAACAGAGA GCTCTCTCTCTCTCCCAGGGATGTGTCTTTTGAAGAGTGGCAGCTTATACTACTGGAAGCTTCTACAAAAAGTAGCCTG AAGTGGCATTTGCTTAAACATGGATGCTCTTTGTTTCTGCAGAGGTTGATACATAGTACACTTCAGTTTTCTTTGACCT GGAGTGACAGTGCAGGAGTAAGACTGCATAATAAAAAGGAACAAAGGCTGGAAGACTATCAAATAATCTTTTGTCTTAA AATTATCTTGGAAACAAGATGTGATGCTACTGAACTGAACACAGAACACCGCTCTGCCTTTGCTTATTTGGGGAAAAAA AGTCCAACAGAAACATTAAAAAGCATAAATGATCTTAGAACTTAACCATGCTGCTGCTTTTTGAGACTGGAGATAATTG TTAGTAAAACTGTTTACAAGCTTTATCAGGGATTTAATGTTACTTGAAGAAATCTTCTTTGAAAAACTCTCAAACTTCA GTCCCTTCAGTTACTTTTGTAGTTTGGGCTCAACGGTCTGTGGCAGCAGTTCAATTTTAGGACAGAGGAACTGCTGGTA ATGTGGGCAGAGATAGGGAACTGGTTAACTTTATTGGGAAATTGGGTCAGTTGCAGCACTAGGCAATGCTGACTTAGTT TTCTTGAACATTGCCTTGGTTCTCTTGGAAAATGTAGCTGGTGAATTGCAGATCATATTACTTTATAATGAGATGCACC TACTGTGAGATACCCAAATGTTTCCTTTTCAATTGAGATCAGAGAAGATTGTCTAGGTCTTTGTTTGTTTAACTGCAAT GTAGATATTTACAAGAAACAGACTTCTGAAATGTGAAACTTTTAGTTTTGATACGCAGCCACTATCGTGTGTTCCTTTG AAGGCAATACTGTTGGACCGTCCTTTTTCCTTAAGGATCTCAGGACTGCAGTACAGGTAATGTGCAATATGCTTTTTCT GACTTGGAGCAGCTTTTCCAAGTCATGTGTCGATGCTGTTTTAAATTATATTTTCAGAGAATTGTTTTTAAGGGCGTTT TAAGGTGGAGGGGAAAAATTAGCCTGCATGCTGATGTGTGCTTGTGTAACCATCTTCTGAGAATGCAGTGTTTGTTGTT AAGCTAATGATTTCCTGCATTCAGCAGGCTAGGGGCATTTTTTTCATTTAAAAAAGGCAAACATAATGAAGAGGCAATA CTTTTCAGAAATGGGTCTAGAAGCGTAGAGAACTTAGTTCATCTTTAATTCTGTTGGTTTTGTATTTATATTAAACTTT ATTTTTAGAAGACTGTAGTGTATTTTATATCTCGTCATTCAACAGAACTACTGAACAACACAATTGTGGCAGTACTGTT GTATGGTTTTTCTTTGGTTTTATCACC
Citation	Alev C, Wu Y, Kasukawa T, Jakt LM, Ueda HR, Sheng G. Transcriptomic landscape of the primitive streak. Development. 2010 Sep 1;137(17):2863-74. Epub 2010 Jul 28.
Copyright	Published by The Company of Biologists 2010. This material is protected by a copyright retained by the authors. Permission granted by Dr. G Sheng.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_414487.3).