GEISHA - A Chicken Embryo Gene Expression Database
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CCR2
C-C motif chemokine receptor 2

Gene
Official SymbolCCR2
Official Full NameC-C motif chemokine receptor 2
CGNC ID51320
also known asCCR5-L, C-C chemokine receptor type 2|C-C chemokine receptor 5 like|chemokine (C-C motif) receptor 2
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001045835
PolypeptideNP_001039300
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.47508
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human729230ENSG00000121807MIM:601267MIM:601267
Mouse12772ENSMUSG00000049103All phenotypic alleles (5):Targeted, knock-out(3) Targeted, other(2) MGI:106185
Xenopus4947056460520
Zebrafish100005081, 100004625, 100004988, 100330391
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene420696
Ensembl GeneENSGALG00000011733
KEGGgga:420696

Entry 1

GEISHA IdCCR2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-TTACCTACGGCATCCTCACCAG-3'
Reverse cDNA Template Primer5'-AATTAACCCTCACTAAAGGTCTCCAGTCTGCTTTGGCTGTC-3'cDNA Template Length402
Complete cDNA Template Probeshow
TTACCTACGGCATCCTCACCAGCATTGTCACGTGGGCTGTTGCTCTTTTTGCCTCTGTTCCGGGGATAGTATTTCACAA
AACTCAACAGGAAAATACACAGTGTACATGCAGTTTTCATTATCCTTCAGATGCCCTCATAAACTGGCAGCACTCCTAC
ATTCTAAAGATGAACATCCTTGGGCTTATCATTCCAATGATCATTATGATTTTCTGTTACTCTCAAATTTTAAGAACAT
TATTTGGATGTAGGAATGAGAAAAAACAGAAGGCGGTTCGACTTATTTTTGTCATCATGATTTTTTACTTCATCTTCTG
GACACCTTTCCATGTTGCTTCTTTCGTGCATACATTTCAAACTTCTTTTTTTTCCCCAGACTGTGACAGCCAAAGCAGA
CTGGAGA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Unlabeled
 
7-12
stage 8
stage 9
stage 11
Foregut
Head Mesenchyme
Intermediate Mesoderm
Neural Plate/Tube
 
13-18
stage 18
  
19-24
stage 19
stage 19
stage 19
stage 22
stage 23
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Isthmus/MHB
Leg Mesenchyme
Liver
Lung
Midbrain
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Wing Mesenchyme
 
25-26
stage 26
stage 26
stage 26
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Liver
Lung
Mesonephros
Midbrain
Sclerotome
Somatic Mesoderm
Spinal Cord
Ventricles
 

Entry 2

GEISHA IdcKR2.Kee.2007Data SourcePublication
Complete cDNA Template Probeshow
ATGGAGAACTATACTGACTTGGGTGACATGCCAACAACAACGTTTGACTACGGTGATACAGCACCATGCATGGGAACTG
AGGAAAAGCACTTTGCAGCAAATTTTCTGCCCCCACTTTACTCTTTGGTGGTGATATTTGGCTTCATAGGCAACATTCT
TGTTGTCCTTATCCTGGTAAAATACAAGAAGTTGAAGAGTATGACTGACATCTACCTGCTCAATCTGGCCATTTCTGAT
TTGCTGTTTGTATTTTCTCTTCCTTTTTGGGCTTATTATGCTGCCCATGACTGGATTTTTGGAGATGCGCTGTGCCGGA
TTCTCTCAGGTGTCTACCTCCTTGGCTTCTACAGTGGCATCTTTTTCATAATCCTGTTGACCATAGACAGGTATCTGGC
CATAGTTCACGCAGTGTTTGCTTTAAAAGCTAGGACAGTTACCTACGGCATCCTCACCAGCATTGTCACGTGGGCTGTT
GCTCTTTTTGCCTCTGTTCCGGGGATAGTATTTCACAAAACTCAACAGGAAAATACACAGTGTACATGCAGTTTTCATT
ATCCTTCAGATGCCCTCATAAACTGGCAGCACTCCTACATTCTAAAGATGAACATCCTTGGGCTTATCATTCCAATGAT
CATTATGATTTTCTGTTACTCTCAAATTTTAAGAACATTATTTGGATGTAGGAATGAGAAAAAACAGAAGGCGGTTCGA
CTTATTTTTGTCATCATGATTTTTTACTTCATCTTCTGGACACCTTTCCATGTTGCTTCTTTCGTGCATACATTTCAAA
CTTCTTTTTTTTCCCCAGACTGTGACAGCCAAAGCAGACTGGAGAAAACAATTCAAGTGACAGAAACAATTTCAATGGT
CCATTGCTGTATCAATCCTGTGATCTATGCATTCGTTGGAGAAAAATTTAGGAAATATCTTCACATGTTTTTCCGAAAG
CATGTTGCAACTCACCTGTGCAAAAAGTGTCCATCTCTTTATCGTGAAAAATTAGAAAGAGTTAGTTCCACATTCACAG
CATCTACTGCTGAGCACGACATCTCTACTGGACTGTAA
CitationYun Kee, Byung Joon Hwang, Paul W. Sternberg, Marianne Bronner-Fraser. Evolutionary conservation of cell migration genes: from nematode neurons to vertebrate neural crest. Genes Dev. 2007 February 15; 21(4): 391–396.
CopyrightCopyright © 2007, Cold Spring Harbor Laboratory Press
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_001045835.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-9
stage 9
stage 9
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Paraxial Mesoderm
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.47508

Mouse

EmageMGI:106185
EurexpressMGI:106185
MGI GXDMGI:106185

Frog

Xenbase6460520

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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