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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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CDC45
cell division cycle 45

Gene

Official Symbol	CDC45
Official Full Name	cell division cycle 45
CGNC ID	1124
also known as	CDC45L, cell division control protein 45 homolog\|cell division cycle 45 homolog
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_415070
Polypeptide	XP_415070
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.53275

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	31052			FBgn0026143
Human	8318	ENSG00000093009		MIM:603465
Mouse	12544	ENSMUSG00000000028	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2)	MGI:1338073
Xenopus	779545, 398081			976057
Zebrafish	406695	ENSDARG00000043720	ZDB-GENE-040426-2710	ZFIN:ZDB-GENE-040426-2710

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	416776
Ensembl Gene	ENSGALG00000001616
KEGG	gga:416776

Entry 1

GEISHA Id	CDC45.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5'-ATGAAAGCGATGGCTCGGAACC-3'
Reverse cDNA Template Primer	5'-AATTAACCCTCACTAAAGGTTCTGTCTCTGGAGGAATCCCC-3'	cDNA Template Length	1106
Complete cDNA Template Probe	show ATGAAAGCGATGGCTCGGAACCTTCAGATAAGCGCAGACGTTTTGAAGAGGAGGTAATAGAGAGAACAATGAGAAGGCG GCAAAGACGAGAATGGGAGGCACGCAGACGTGAAATTCTTTTTGATTACGAGCAATACGAGTACCATGGGACCTCGTCT GCGATGGTGATGTTTGATCTGGCGTGGATAATGTCTAAAGATTTGAATGACATGTTGTGGTGGGCTATTGTTGGCCTAA CAGATCAGTGGGTCCAAGATAAAATTACTCACATTAAGTATGTGACTGATATTGGAATTCTGCAGCGCCACGTGTCTCG CCATAACCACCGCAATGAAGATGAAGAAAATTCCCTGTCAATTGATTGCATGCGAATAGCATTTGAATACGATCTGCGC CTGGCACTTTATCAACACTGGTCTCTATATGAAAGTCTCTGTAATACTTCATATACCTCTGCTACCCTTAAGCTTTGGT CAGTACAAGGACAGAAGCGGCTGCAGGAGTTTTTGGCTGACATGGGTTTGCCTTTGAAGCAAGTGAAGCAGAAGTTTAA TTCCATGGACGTGTCTTTGAAAGAAAATCTTCGGGAAATGATTGAAGAATCTGCAAATAAATTTGGAATGAAGGATTTA AGAGTTCAGACCTTTAGCATTCACTTTGGCTTTAAGAACAAGTTCTTAGCAAGTGATATAGTTTATGCCACAGCTTCTC TCATGGAGAACATAGAGAAAGAGGGGCCTGAAACAACTAATTTCATTAAAGCTTTGGACAGTCTCTCCAGGGGTAACCT GGACAAACTGCACCAAGGGCTGGACCTAGCAAAAAAGCAGTTACGTGCCATTCAGCAGACGGTAGCCAGCTGCATTTGC ACCAACCTTGTTATTTCCCAAGGGCCTTTTCTTTATTGCTCTCTCATGGAGGGTACGCCAGATGTGAAGCTGTTTTCTA AACCAGTATCTCTGTGCCTGCTTAGTAAATACTTGCTCAAATCCTTTGTTTGCTCTACGAAAAACAAGCGCTGTAAATT GCTGCCACTGATAATGGCTGCGCCAATGGATGTTGAACAGGGAACTGTGATCATGGTGGGGATTCCTCCAGAGACAGAA

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

Unlabeled

7-12

stage 8

stage 10

stage 12

Blood Islands
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Midbrain
Neural Plate/Tube
extraembryonic mesoderm

13-18

stage 17

stage 18

Forebrain
Foregut
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Leg Mesenchyme
Midbrain
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Somites
Tail
Wing Mesenchyme

19-24

stage 20

stage 21

Allantois
Eye
Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Lung
Myotome
Neural Plate/Tube
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Ventricles
Wing Mesenchyme

stage 25

Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Lung
Myotome
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme

Entry 2

GEISHA Id	CDC45.UApcr2	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5’-TGTTCCAGACTTCATAGTGC-3’
Reverse cDNA Template Primer	5’-AATTAACCCTCACTAAAGGGGAACTGAAGACATCTAGGC-3’	cDNA Template Length	666
Complete cDNA Template Probe	show TGTTCCAGACTTCATAGTGCTGCAATTATGCCAACTTGCTTTATTTGAAATGTTCCAATACAGGCCTGGACTTTGGGTT TTGTGCTTGAGAGGCTAAAGGATTTCTAACCTGAGCACACGGTTATTGGATACTGCTTCTCTGTAAGGACTCAATCCTT ATAACGGCAAAGTGCCTCAAGTAGGAGAATTTGCACATGGCATTTCTGTTTGTCAAACCTGCTTTTATTAGTAGATGTG CTCCTTTGATGTTTAGCTGTGGGCTAACAACAAAAATAGGTTTAAAAAAGTTCCATATCTAAATGTTCCTTTAAAACTC TAAACATTCAAGGTAAATCATTTTTAAAATAACTTCTTCAAAACTTGTAATGAAAATCTTTTTTGGTGCTGTCAGGTTG AAGCCTTGTATTTTGGTTGAAATAGCTGTTTTGTGAGGCAAGTTTTAAGATTTTAGGGATTTAAAATTCATGTACTAAG AAACTTCCAGTTACCAGATAAAGTCTATGGAATTTCAGCGCTAGCGAAGCATTCTTAGTCATGCACTGTGATGCTGTAT TGTCATTTGTAGACCAGATTTAGCAATAATTTTCCTGGGAAGAAACTAAAACAATATGATAACTGTTTGTGGACTGTAG CGTTACAACTGTCAGCCTAGATGTCTTCAGTTCC