Geisha

home

contact

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

CDH10
cadherin 10

Gene

Official Symbol	CDH10
Official Full Name	cadherin 10
CGNC ID	9789
also known as	cadherin-10, cadherin-10\|cadherin 10, type 2 (T2-cadherin)
gene type	protein-coding

Genomic Map

Sequence Information

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.3253

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	1008	ENSG00000040731		MIM:604555
Mouse	320873	ENSMUSG00000022321	All phenotypic alleles (6):Targeted, other(6)	MGI:107436
Xenopus	100496218			1012078
Zebrafish	568370	ENSDARG00000055843	ZDB-GENE-060614-1	ZFIN:ZDB-GENE-060614-1

Gene Ontology

Molecular Function	calcium ion binding
Biological Process	homophilic cell adhesion
Cellular Component	integral component of membrane, plasma membrane

Links to other databases

GEISHA Id	CDH10.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	CCAGATGGGTGGATTATCAGGG
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGATGGTAAGTGTGCCAGTGCTGCTC	cDNA Template Length	1020
Forward cDNA Template Probe	show ATATCACCACCTGGGNTAAGAGGGTATGTACCTTATTTCATGGTCGACTAAAGCCATTTCTTCTTGGTTAAAATTCTGG CAGTGTTATCTTCATTGTCCTGAACAGTGAAATTAGGGTTAACAGCTGCTAAACTGAAGAAAAATTTTTGTCCCCCAAG AGGGTCATCTTTGTCTACTGCACTTATGGTCTGGATAAGCTGTCCGGCTCTTGCATTTTCACAAACAAAAGTATCGTAG AATACAGCAAACTGTGGGGCATTGTCATTAACATCCAAAATTCGTACATAGACAGGAACACGGGTAGTATCTTTCAGGT TGTTGATCTCAGCTGCTATAACACTGAGATTGTGCCATTGTGATATCTCACGGTCCAGTGGCTTAGAAGTATAGATGGA TCCATTTCCAGAATGAATATTGAATATCCTGTCAAGATCTGTATGACGATCCAGAGAAAACCTTATAGGGCTTGAAGCT GAATCAGGATCTCGTGCCATTACTGTTCCTATTATTGTCCCCAACTCAATATCTTCATGAACCTCAAAAAGGTAAGAAG ATCTGCTGAAGACAGGAGGCTCATCTACATCCTCTACAGAGATTTTCACAATAGTTGTATCTTTGAAAGGCCCAAGGTA ATAGAAGCGTGGATCCACATGTGTATTCTCAGCTTCTACTTTCAAGGTATAAAGCCTTCTTGTCTCATAGTCCAAGGGC TTTCGCACAGTAATGATGCCTTCCTGTGTGTCCCTCTGTGTCACGATGTCAAACATATCTGTCCCATCACCATCTATGA TTCTGTATTCTACTTCTGCATTTTTTCCAGTGTCTGCATCTGTGGCTTTGACGCTGCCAATAGGTGTCCCAACTGGAGA ANACTCAGGAATGCGGAGGTGGATGGTACTCTGGGGNAAATCGAGGTGGATTGTCATTGACATCAGTCAAAGTGATGTT CACAGTGGTGGTCCCTGATATCNCCCCCNTCTGG

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

7-12

stage 10

stage 12

25-26

stage 26

GEISHA Id	CDH10.Abellan.2009	Data Source	Publication
Complete cDNA Template Probe	show GGATCCCTCAAATACATTTTGTCAGGAGATGGGGCTGGTACTCTTTTTATAATTGATGAGAAAACAGGTGACATTCATG CTACTCGGAGAATTGACAGGGAAGAGAAAGCCTTTTACACTCTGCGTGCCCAAGCTATTAACAGAAGAACTCTGAGACC AGTGGAACCTGAATCTGAGTTTGTCATCAAAATCCATGACATCAATGACAATGAACCAACATTTCCAGAAGAAATTTAT ACTGCTAGTGTTCCTGAAATGTCTGTCGTGGGTACCTCTGTGGTGCAAGTCACAGCTACGGATGCCGATGACCCTTCAT ATGGTAACAGTGCCAGAATCATTTACAGCATACTTCAAGGACAGCCGTATTTCTCTGTGGAACCAGAAACAGGCATCAT CCGGACTGCTTTGCCAAATATGAACAGAGAGAACAGGGAGCAGTACCAAGTGGTTATCCAGGCAAAGGACATGGGAGGC CAGATGGGTGGATTATCAGGGACCACCACTGTGAACATCACTTTGACTGATGTCAATGACAATCCACCTCGATTTCCCC AGAGTACCATCCACCTCCGCATTCCTGAGTCTTCTCCAGTTGGGACACCTATTGGCAGCATCAAAGCCACAGATGCAGA CACTGGAAAAAATGCAGAAGTAGAATACAGAATCATAGATGGTGATGGGACAGATATGTTTGACATCGTGACACAGAGG GACACACAGGAAGGCATCATTACTGTGCGAAAGCCCTTGGACTATGAGACAAGAAGGCTTTATACCTTGAAAGTAGAAG CTGAGAATACACATGTG
Citation	Abellán A, Legaz I, Vernier B, Rétaux S, Medina L. Olfactory and amygdalar structures of the chicken ventral pallium based on the combinatorial expression patterns of LIM and other developmental regulatory genes. J Comp Neurol. 2009 Sep 20;516(3):166-86.
Copyright	Copyright © 2009 Wiley-Liss, Inc.
Comments	The sequence below was obtained from NCBI (acc # NM_214673.1) - Showing 807 bp region from base 497 to 1303 using the information provided in the publication.