GEISHA - A Chicken Embryo Gene Expression Database
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CDH9
cadherin 9

Gene
Official SymbolCDH9
Official Full Namecadherin 9
CGNC ID53378
also known ascadherin-9|cadherin 9, type 2 (T1-cadherin)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_001231540
PolypeptideXP_001231541
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human1007ENSG00000113100MIM:609974
Mouse12565ENSMUSG00000025370All phenotypic alleles (1):Targeted, other(1) MGI:107433
Xenopus1004959106039318
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene428487
Ensembl GeneENSGALG00000012923
KEGGgga:428487
GEISHA IdCDH9.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCCAGATGGGAGGACTATCAGGAAC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGACAGACTTGGATGGTCAGCGTGcDNA Template Length1039
Forward cDNA Template Probeshow
AAATATTATGATTGGCAGGTGATAGATACTTGGTCTTACTTCGGCTGTATCCATTTCTTCTAGCTTATAATTCCTGCTG
TGTTGTCTTTGTTGTCTATAATGGAGAAGTTTGGATGAACAGCAAATTCTGGCACCAACTCAAAGAAAAATTTGTGTCC
TCGAGGAGGTTCATCTTTGTCAACTGCACTCACAGTCTGTATCAACTGTCCTGCTTTTGCATTTTCACAGACAAATGTT
TCATAGTATTTGGCAAATTCTGGTGCATGATCATTTATGTCTAAAATCCGGATGAAGACAGGTATCTGGCTACTTTGTT
TAGGATTATTGATTTCAGTTGCTATGACAGTGATGTTGTGCCAGGGAGTTTCTTCCCGGTCAAGTGGCTTTGAGATGAA
TAAAGATCCATTTCCTGAATAGATGTTGAATATTCTATCCAGGTCAGTGTGTCGATCCACAGAATACTTTATTGTATTC
TTNGTTATATCTGGATCCTGGGCCACAACCTGCCCAATAATGCTTCCTTCCTTGGCATCTTCATCTACTTCTATTAAAT
ATGAGGATCTGCTGAACACTGGAGGTTCGTCTATGTCTTCTACAGAAATTTTGACCAGAGCTGTGTCTTTGAATGGCCC
CAGCTGAAGAAAACGAGGATCCAGATGAGTGTTTGTTGCTTCCACTCTTAAGGTATATAATATCTTCTTTTCAAAATCC
AGCTGCTTTTTGACAATTATANTCCCTTCCNGNGTATCCTTGTCAGTGACNATATCAAACATGTCTGATCCATCCCCAT
TGGAAATACTATACNCACNCTCNGCATTTNCNCCCAGATCNGGGTCATTGGCTTTANTNCTGCCAAGAGGACTCCCAGG
TGGTGCANATNCNGGACAGCTGAACTGGNAGGTGCTCNGAGAAATCGAGGNGGAATTGNCATTGACATCANCAGNGNGA
TGTNCCCGGGGTGGTNCCNGANAGCCCCCCC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 6
Early Mesoderm
Epiblast
 
7-12
stage 8
stage 8
stage 9
stage 10
stage 10
stage 11
Blood Vessels
Extraembryonic
Extraembryonic Mesoderm
Head Mesenchyme
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Somites
 
13-18
stage 15
stage 15
stage 16
stage 16
Amnion
Extraembryonic
Extraembryonic Blood Vessels
Head Mesenchyme
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Somites
Spinal Cord
Trunk Mesenchyme
 
19-24
stage 20
stage 20
stage 20
stage 21
Allantois
Blood Vessels
Foregut
Head Mesenchyme
Hindgut
Leg Ectoderm
Leg Mesenchyme
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Tail
Wing Mesenchyme
 
25
stage 25
Widespread Expression
 

Mouse

Emage
EurexpressMGI:107433
MGI GXDMGI:107433

Frog

Xenbase6039318

Fruit Fly

BDGP

Zebra Finch

ZEBrACDH9

Zebrafish

ZFIN
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