GEISHA - A Chicken Embryo Gene Expression Database
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CDK7
cyclin dependent kinase 7

Gene
Official SymbolCDK7
Official Full Namecyclin dependent kinase 7
CGNC ID10969
also known ascyclin-dependent kinase 7
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_001234586
PolypeptideXP_001234587
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.9685
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene771294
Ensembl GeneENSGALG00000014790
KEGGgga:771294

Entry 1

GEISHA IdChEST582c23Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GGGACAGATCGTGGCTATCAAAAAGATTAAACTGGGCCATCGATCAGAAGCTAAAGATGGAATCAACAGAACAGCTCTC
AGAGAGATAAAGTTGTTACAGGAGCTAAGCCATCCAAATGTTATGGTCTTTTAGATGCGTTGGACACAAATCTAATATT
AGCTTGGTGTTTGATTTCATGGAAACAGACCTTGAGGTTATTATAAAGGATACTAGTATTGTGTTGACACAATCTCACA
TCAAAGCATATATGCTGATGACGCTTCAAGNGTTTAGAGTATTTACATCAACAGTGGATTCTACACAGGGATCTTAAAC
CAAATAATTGTTGTTAGATGGAAATGGTGTTTTGAAATTGGCTGACTTTGGCTTGGCAAAATCTTTTGGAAGCCCAAAC
AGAGTTTACACGCACCAAGTAGTAACAAGATGGTACCGATCCCCAGAACTACTGTTTGGTGCTAGAATGTATGGTGTCG
GTGTTGATATGTGGGCTGTTGGTTGTATTCTAGCTGAGTTACTTCTCAGGGTTCCTTTTTTGCCAGGAGACTCTGATCT
TGACCAGTTGACAAGGATTTTTGAAACACTGGGCACTCCAACAGAAGAACAGTGGCCTGGAATGACAAACCTCCCGGAT
TACGTCACGTTTAAGTCTTTCCCTGGAATGCCTCTTCAACATATCTTCAGTGCAGCTGGTGAT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 15
stage 16
  
19-24
stage 20
stage 24
Head Mesenchyme
Hindbrain
Midbrain
Neural Plate/Tube
Sections pending.
25
stage 25
Head Mesenchyme
Hindbrain
Midbrain
Sections pending.

Entry 2

GEISHA IdCDK7.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-GTTCTTCTCGCCTTTTCCGC-3'
Reverse cDNA Template Primer5'-AATTAACCCTCACTAAAGGAGCACAGTTTGGTCTGGGTAGCAG-3'cDNA Template Length962
Complete cDNA Template Probeshow
GTTCTTCTCGCCTTTTCCGCTCGGCAGCCATGGATGCGCGGGCTCGTGCCAAGCGCTACGAGAAACTCGACTTCTTGGG
GGAGGGGCAGTTTGCTACTGTGTATAAGGCAAAGGACAAGAACACGGGACAGATCGTGGCTATCAAAAAGATTAAACTG
GGCCATCGATCAGAAGCTAAAGATGGAATCAACAGAACAGCTCTCAGAGAGATAAAGTTGTTACAGGAGCTAAGCCATC
CAAATGTTATTGGTCTTTTAGATGCGTTTGGACACAAATCTAATATTAGCTTGGTGTTTGATTTCATGGAAACAGACCT
TGAGGTTATTATAAAGGATACTAGTATTGTGTTGACACAATCTCACATCAAAGCATATATGCTGATGACGCTTCAAGGT
TTAGAGTATTTACATCAACAGTGGATTCTACACAGGGATCTTAAACCAAATAATTTGTTGTTAGATGGAAATGGTGTTT
TGAAATTGGCTGACTTTGGCTTGGCAAAATCTTTTGGAAGCCCAAACAGAGTTTACACGCACCAAGTAGTAACAAGATG
GTACCGATCCCCAGAACTACTGTTTGGTGCTAGAATGTATGGTGTCGGTGTTGATATGTGGGCTGTTGGTTGTATTCTA
GCTGAGTTACTTCTCAGGGTTCCTTTTTTGCCAGGAGACTCTGATCTTGACCAGTTGACAAGGATTTTTGAAACACTGG
GCACTCCAACAGAAGAACAGTGGCCTGGAATGACAAACCTTCCGGATTACGTCACGTTTAAGTCTTTCCCTGGAATGCC
TCTTCAACATATCTTCAGTGCAGCTGGTGATGATTTACTTAGTCTTCTACAAGGATTATTTACATTTAATCCTTGTTCT
AGAGTTACAGCCACTCAGGCATTAAAACAGAAGTATTTCAGTAATCGACCAGGACCCACTCCAGGAGATCTGCTACCCA
GACCAAACTGTGCT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Epiblast
Unlabeled
 
7-12
stage 8
stage 10
Extraembryonic Mesoderm
Head Mesenchyme
Neural Plate/Tube
extraembryonic mesoderm
 
13-18
stage 16
stage 17
Foregut
Head Mesenchyme
Myotome
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Somites
Unlabeled
 
19-24
stage 22
stage 23
stage 23
stage 23
Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Lung
Mesonephros
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Wing Mesenchyme
 
25-26
stage 26
stage 26
stage 26
Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme
 

Entry 3

GEISHA IdCDK7.Robb.2012Data SourcePublication
Complete cDNA Template Probeshow
GCCGCGCGGTGACGTCACGGCTGCCAGCGGCAGGGCAGGCCGGCGGGCCGGGAGCGGCGCGGGGAGCGGGCGCTGATAG
AGCTCCGTCGCGACTCTTCCGCTGCGTGTCTCGTCACTCCGGCCTTGAGTTCTTCTCGCCTTTTCCGCTCGGCAGCCAT
GGATGCGCGGGCTCGTGCCAAGCGCTACGAGAAACTCGACTTCTTGGGGGAGGGGCAGTTTGCTACTGTGTATAAGGCA
AAGGACAAGAACACGGGACAGATCGTGGCTATCAAAAAGATTAAACTGGGCCATCGATCAGAAGCTAAAGATGGAATCA
ACAGAACAGCTCTCAGAGAGATAAAGTTGTTACAGGAGCTAAGCCATCCAAATGTTATTGGTCTTTTAGATGCGTTTGG
ACACAAATCTAATATTAGCTTGGTGTTTGATTTCATGGAAACAGACCTTGAGGTTATTATAAAGGATACTAGTATTGTG
TTGACACAATCTCACATCAAAGCATATATGCTGATGACGCTTCAAGGTTTAGAGTATTTACATCAACAGTGGATTCTAC
ACAGGGATCTTAAACCAAATAATTTGTTGTTAGATGGAAATGGTGTTTTGAAATTGGCTGACTTTGGCTTGGCAAAATC
TTTTGGAAGCCCAAACAGAGTTTACACGCACCAAGTAGTAACAAGATGGTACCGATCCCCAGAACTACTGTTTGGTGCT
AGAATGTATGGTGTCGGTGTTGATATGTGGGCTGTTGGTTGTATTCTAGCTGAGTTACTTCTCAGGGTTCCTTTTTTGC
CAGGAGACTCTGATCTTGACCAGTTGACAAGGATTTTTGAAACACTGGGCACTCCAACAGAAGAACAGTGGCCTGGAAT
GACAAACCTTCCGGATTACGTCACGTTTAAGTCTTTCCCTGGAATGCCTCTTCAACATATCTTCAGTGCAGCTGGTGAT
GATTTACTTAGTCTTCTACAAGGATTATTTACATTTAATCCTTGTTCTAGAGTTACAGCCACTCAGGCATTAAAACAGA
AGTATTTCAGTAATCGACCAGGACCCACTCCAGGAGATCTGCTACCCAGACCAAACTGTGCTGCGGAAGCTGTAAAGGA
GCAACAACACACACTTTTGAATTTAAAAAGGAAACGACCAGAGGGAATAGAACAAGGATTACCAAAAAAATTGATTTTT
TGATCGCCATGGATGGTGGATGAAAATGAGAATTCAAATGACGTGAGTCCCAACCTTGAAAAACGCTGGATGGTTATTC
TTAGATTATATTAATATGTAAAATGGTAATATAATATTTTATTAAGAAAAGTGAAGTTTTTAATTTTTTTTTTTTAAAT
AAAATACTGCTTAAAA
CitationRobb EA, Antin PB, Delany ME. Defining the Sequence Elements and Candidate Genes for the Coloboma Mutation. PLoS One. 2013; 8(4): e60267.
CopyrightThis is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI XM_001234586.3
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25
stage 25
stage 25
Ubiquitous
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.9685

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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