GEISHA - A Chicken Embryo Gene Expression Database
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CHD7
chromodomain helicase DNA binding protein 7

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolCHD7
Official Full Namechromodomain helicase DNA binding protein 7
CGNC ID51424
also known asCHD-7, chromodomain-helicase-DNA-binding protein 7|ATP-dependent helicase CHD7
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001077586
PolypeptideNP_001071054
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.20865
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly33185FBgn0086902
Human55636ENSG00000171316MIM:214800MIM:608892
Mouse320790ENSMUSG00000041235All phenotypic alleles (18):Chemically induced(9) Targeted, knock-out(1) Targeted, other(5) Gene trapped(3) MGI:2444748
Xenopus100379668, 443577877229
Zebrafish569471ENSDARG00000075211ZDB-GENE-070912-179ZFIN:ZDB-GENE-070912-179
Gene Ontology
Molecular FunctionATP binding, chromatin binding, DNA binding, helicase activity
Biological Processadult heart development, adult walking behavior, artery morphogenesis, blood circulation, more...central nervous system development, chromatin modification, cognition, cranial nerve development, embryonic hindlimb morphogenesis, face development, female genitalia development, heart morphogenesis, in utero embryonic development, nose development, palate development, positive regulation of multicellular organism growth, regulation of growth hormone secretion, regulation of transcription, DNA-templated, retina development in camera-type eye, rRNA processing, semicircular canal morphogenesis, sensory perception of sound, skeletal system development, T cell differentiation, transcription, DNA-templated
Cellular Componentnucleus
Links to other databases
Entrez Gene421140
Ensembl GeneENSGALG00000015472
KEGGgga:421140
GEISHA IdCHD7.Aramaki.2007Data SourcePublication
Complete cDNA Template Probeshow
CCTTCGTAGACAGTGGCTCGATGTGGGGGCCGCGGGCAGTTCAAGTGCCAGACCAGATAAGAGCACCATACCAGCAGCA
GCAGCAACAGCCGCAACCGACACAGCCGCCACAAGCACCCTCCGGACCCCCGGGGCAGGGCCATCCTCAGCACATGCAG
CAGATGGGAAACTACATGGCTCGTGGTGATTTTTCAATGCAACAGCACGGTCAGCCGCAACAGCAGAGGATGAACCAGT
TTTCTCAAGGCCAAGAAGGCCTCAATCAGGGAAACCCTTTCATTGCCACCTCAGGACCTGGCCACTTGTCTCATGTGCC
CCAGCAGAATCCCAGTATGGCACCTTCTTTGCGACACTCTGTCCAGCAATTTCACCACCATCCCCCCACTGTTCTCCAT
GGAGAATCAGTAGCCCACAGCCCCAGATTCTCCCCTAATCCTCCCCAGCAGGGTGCTGTTAGGCCGCAAACACTTAATT
TTAGTTCTCGGAGCCAGACGGTACCCTCACCTACTATAAACAACTCAGGGCAGTATTCTCGATATCCTTACAGTAACCT
TAATCAGGGATTAGTTAATAATACAGGGATGAATCAGAATTTAGGCCTTACAAATAACACTCCAATGAATCAGTCTGTA
CCAAGATACCCAAATGCTGTAGGATTTCCATCAAACAGTGGTCAAGGACTAATGCACCAGCAACCATCCACCCTAGTGG
CTCACTTAACCAAATGAACACGCAAACTATGCACCCTTCAACAGCCTTCAGGGAACTTATTGCCTCTTCCACTTCCCAT
GTTCACCTTATGAAAGCAATGAGTAATCCAGCAGGGTTACGCTTCTCCACAGGGTTAGGCCTGGTAGCGCCTGGAATAC
CATTGGAAGTTGGCAGTTATCAAATATTCCCA
CitationAramaki M, Kimura T, Udaka T, Kosaki R, Mitsuhashi T, Okada Y, Takahashi T, Kosaki K. Embryonic expression profile of chicken CHD7, the ortholog of the causative gene for CHARGE syndrome. Birth Defects Res A Clin Mol Teratol. 2007 Jan;79(1):50-7.
CopyrightCopyright (c) 2006 Wiley-Liss, Inc.
CommentsThe sequence below was obtained from NCBI (acc # DQ978381.1) using the information provided in the publication as described in Aramaki et al.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
Unlabeled
 
7-12
stage 7
stage 8
stage 12
stage 12
stage 12
stage 12
stage 12
stage 12
stage 12
stage 12
stage 12
Ear/Otic Placode
Ectoderm
Eye
Forebrain
Hindbrain
Neural Plate/Tube
Somites
Unlabeled
 
13-14
stage 14
stage 14
stage 14
Ear/Otic Placode
Eye
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.20865

Mouse

EmageMGI:2444748
EurexpressMGI:2444748
MGI GXDMGI:2444748

Frog

Xenbase877229

Fruit Fly

BDGPFBgn0086902

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070912-179
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