GEISHA - A Chicken Embryo Gene Expression Database
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FAM171A1
family with sequence similarity 171, member A1

Gene
Official SymbolFAM171A1
Official Full Namefamily with sequence similarity 171, member A1
CGNC ID6654
also known asC10orf38, protein FAM171A1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_418631
PolypeptideXP_418631
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human221061ENSG00000148468
Mouse269233ENSMUSG00000050530All phenotypic alleles (1):Targeted, knock-out(1) MGI:2442917
Xenopus100170195, 4958305725403
Zebrafish795681ENSDARG00000079788ZDB-GENE-061208-1ZFIN:ZDB-GENE-061208-1
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene420528
Ensembl GeneENSGALG00000008764
KEGGgga:420528
GEISHA IdCHEP40.Bento.2011Data SourcePublication
Complete cDNA Template Probeshow
GAGGCGGCTCAAGAAGTAACGCTGAAAGTCCACGTGAGCGATGCCAGCACACATCAGCCAGTAACAGAAGCTTTCATTG
AGATTTTTACCAACCAGATCTCCATTGCATCTGGAACCTCAGGAGCAGATGGCACTGCCTTCCTCAAGTTTCAGTATAA
ATTGGGCAATCAGCTGATAGTGACTGCTAGTAAACATGCCTATGTGCCAAATTCTGCACCATGGAAACCTGTAAGATTG
CCTGTCTTCTCTTCACTGAGTCTTGGACTTCTTCCTGAACGCTCAGCTACTCTAATGGTCTATGATGATGTAGTCCAGA
TAGTCTCAGGATTTCAAGGTGCACGGACTCAGCCACAGGTTCACTTTCAGAGAAGATCAGTGAAATTACCGGAGAACAC
CAGCTACAGTGATTTGACAGCATATCTAACCGCAGCCAGTTCACCGTGGGAAGTGGACAGTTTCCCTTACTTGCAGGGA
TTGCGATGGAAATGGAACAGGAAACAGCACGAGGTATGACCTCACCCCTGTTGCTGCAGTCAGTGTCCATCTTCTCAAC
AGTGATGGCACTCCAGTCCCAGTGAATGGCCCCATCTATGTAAACAGTGCCTCTGCCAACAAACAGCAACTTGAAAGCA
CAATGCACACATTCCAGCATGGAGGTTTGACCAAAAATTTGGTAGGTCACATTTAATTACGATCCCTAGATGGCTTCAT
TTATCTGAAACTAATGTCTCACTAACATTTATCGTCTTATGCTATGTTATGCATTAAAGTCTTCACCGGAAGTGTACCA
AAAAATATGCTTCCTGTCTAAAGAAGAGAATATGGTGTGTTTATCCAAGCATATGTAGTATTGTGCACATATATCGAGT
AGCATTCCATGCCCTTCCCGCCAAA
CitationBento M, Correia E, Tavares AT, Becker JD, Belo JA. Identification of differentially expressed genes in the heart precursor cells of the chick embryo. Gene Expr Patterns. 2011 Oct;11(7):437-47.
CopyrightCopyright © 2011 Elsevier B.V. All rights reserved.
CommentsThe cDNA template for the CHEP40 antisense probe was obtained from BBSRC - ChEST739g15 as described in Bento et al., 2011. CHEPO also known as: C10orf38, protein FAM171A1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
stage 5
Area Pellucida
Early Endoderm
Early Mesoderm
Ectoderm
extraembryonic mesoderm
eem, extraembryonicmesoderm
7-12
stage 8
stage 10
stage 10
stage 11
stage 11
Cardiovascular
Endocardium
Endoderm
Heart
Neural Plate/Tube
Somites
iev, intraembryonic vasculature
13-14
stage 14
Heart
Neural Plate/Tube
iev, intraembryonic vasculature
all
 
  

Mouse

EmageMGI:2442917
EurexpressMGI:2442917
MGI GXDMGI:2442917

Frog

Xenbase5725403

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-061208-1
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