GEISHA - A Chicken Embryo Gene Expression Database
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KRT19
keratin 19

Gene
Official SymbolKRT19
Official Full Namekeratin 19
CGNC ID49516
also known asGK-19, KRT24, keratin-19, keratin, type I cytoskeletal 19|CK-19|K19|cytokeratin-19|keratin 24, Keratin, type I cytoskeletal 19 , Cytokeratin-19, CK-19, Keratin-19 (K19)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205009
PolypeptideNP_990340
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.2612
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse16669ENSMUSG00000020911All phenotypic alleles (5):Targeted, knock-out(1) Targeted, other(4) MGI:96693
Xenopus394514, 432054490359
Zebrafish
Gene Ontology
Molecular Functionstructural molecule activity
Biological Process
Cellular Componentintermediate filament
Links to other databases
Entrez Gene395861
Ensembl GeneENSGALG00000019719
KEGGgga:395861

Entry 1

GEISHA IdKRT19.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGGGAATGAAAAGACAACGATGC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTCAATGCCTGGAGCAGAGTCCcDNA Template Length500
Forward cDNA Template Probeshow
AATTCAACTGGACTGGCGGCTACCTGGTCCTCCCAGGGCACTCATTTCCTCCTCGGTGGGTTCTTCTTCAGGGTAGGCC
AGCTCCTCCTTCAGGGTTCTCAATCTGCAGCTCCAGGTCGGTCCTCGCCAGCGTCAGCTCGTCCAGCACCCTGCGCAGC
CCGTTGATGTCGGCCTCCACGCTCATGCGAAGAGCTTGCTCTGTTTCAAACTTGGTCTTGAAGTCGTCAGCGGCCAGTC
TGGCATTGTCAATCTGCAGGACAACCTTCGAGTTGTCGATAGTGGCAGCAAGGATCTGGTCTCGGAGGTCTTCAATAGC
CTTGTAATAAGGGCTGTAGTCTCGGGCAGGGCCTGGTCCTTGTTTTAGGTACCACTCACGGATTTTAGTTTCAAGATCT
GAGTTTGCTTCTTCCAATGCACGCACTTTGTCCAGGTAGGACGCGAGGCGGTCATTCAGGTTTTGCATCGTTGTCTTTT
TCATTCCCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
stage 5
Area Opaca
Early Endoderm
Epiblast
Headfold
 
7-12
stage 7
stage 7
stage 8
stage 9
stage 10
stage 11
stage 11
Anterior Intestinal Portal
Area Opaca
Blood Islands
Ectoderm
Extraembryonic
Headfold
extraembryonic ectoderm
extraembryonic endoderm
extraembryonic mesoderm
 
13-18
stage 13
stage 18
stage 18
Amnion
Ear/Otic Placode
Ectoderm
Foregut
Hindbrain
Notochord
Pharyngeal Arches and Clefts
Spinal Cord
extraembryonic ectoderm
extraembryonic endoderm
extraembryonic mesoderm
 
19-24
stage 19
stage 22
stage 24
stage 24
stage 24
stage 24
Allantois
Amnion
Ear/Otic Placode
Ectoderm
Foregut
Hindbrain
Liver
Lung
Nasal Placode/Nerve
Notochord
Oral Pharynx
Pharyngeal Arches and Clefts
Pharynx
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Wing Ectoderm
 
25-26
stage 26
stage 26
Allantois
Ectoderm
Epicardium
Foregut
Heart
Leg
Lung
Oral Pharynx
Pharyngeal Arches and Clefts
Somatic Mesoderm
Spinal Ganglia and Nerves
Wing
Yolk Sack or Stalk
 

Entry 2

GEISHA IdCK19.Yanai.2005Data SourcePublication
Complete cDNA Template Probeshow
TCACAGGCATAAAAGAGCTGAGGTGGGGGAAAGGAACTCGCATTCCTGCCTCAGGATCACAAACTACAGCGCGCTTCAG
GTCCTCGGCATTCCCCTCCATGGCGACTTATAGCTTCAGGCAAACCACCTCCTCCGTGGCAGGGGGACCCTGCGGCCGC
TCGCTCCGTTTGGGTGGCGGCTCCTTCAGGGCTCCGAGCATCCATGGGGGATCCGGTGGCAGGGGAGTGTCAGTCTCTT
CCGCCAGATTTGTCTCTTCTGGCCTAGGAAGCGGCCTGGGAGGCGGATATGGAGGTGCCTTCAGCAGCAGCTTTAGTGC
AGGCTTCGGTGGTGGCTATGGCGGGGGCTTGGGCTCTGGTGACGGTCTCCTCTCAGGGAATGAAAAGACAACGATGCAA
AACCTGAATGACCGCCTCGCGTCCTACCTGGACAAAGTGCGTGCGTTGGAAGAAGCAAACTCAGATCTTGAAACTAAAA
TCCGGGAGTGGTACCTAAAACAAGGACCAGGCCCTGCCCGAGACTACAGCCCTTATTACAAGGCTATTGAAGACCTCCG
AGACCAGATCCTTGCTGCCACTATCGACAACTCGAAGGTTGTCCTGCAGATTGACAATGCCAGACTGGCCGCTGACGAC
TTCAAGACCAAGTTTGAAACAGAGCAAGCTCTTCGCATGAGCGTGGAGGCCGACATCAACGGGCTGCGCAGGGTGCTGG
ACGAGCTGACGCTGGCGAGGACCGACCTGGAGCTGCAGATTGAGAACCTGAAGGAGGAGCTGGCCTACCTGAAGAAGAA
CCACGAGGAGGAAATGAGTGCCCTGGGAGGACAGGTAGCCGGCCAAGTCAGTGTGGAAGTGGACTCTGCTCCAGGCATT
GACCTGTCCAAGATCCTGGCCGATATGAGAGACCAGTATGAACACATGGCGGAGAAGAACAGGAAGGATGCTGAGGCCT
GGTTCCACAGTAAGACTGAGGAGCTGAACCGTGAGGTAGCCGTCAATACCGAACAGCTACAGAGCAGCAAGTCTGAAGT
CACTGACCTGAGACGCACCCTCCAAGGGCTGGAGATAGAGCTGCAGTCCCAGCTCAGCATGAAAGGCGCGCTGGAGAGC
ACCCTGGCAGACACCGAAGGGCGTTACGGCGCACAGCTGGCGCAGATCCAGGACATGATTGGCAGCATTGAGGCGCAGC
TGGCTGAGCTCCGCGCTGATATGGAGCGCCAGAACAGCGAATACAAGATGCTCATGGATATCAAGACCCGTCTGGAGCA
GGAGATCGCTACTTACCGGCAGCTCCTGGAGGGTCAGGAGTCCCAGTTGTTTGGATCCCTTTCTGGATCTCCCGACAAA
AGAGACAAGCCGGCAGATGGAAAATAATACTGAAAGTCCCATAACTGTCATCTTCAAGATGAGGGAAAAAAAGGAATTA
AAATGCAGAGGAATCACACTAAACTGCTGGAAATTGAGTGCACAGAGAATCCTTGACTACACAGAGTTTAAGTAGATTG
GTTCATTTAGCAGCGATTAATTTGCAGACTAGGTTAGGCTTTTAATTACTTCCAGTTCTTTCTTGTACTGAAATGCTGT
ATCTATTCCAATAAAGATGATCTTGC
CitationYanai M, Tatsumi N, Endo F, Yokouchi Y. Analysis of gene expression patterns in the developing chick liver. Dev Dyn. 2005 Jul;233(3):1116-22.
CopyrightWiley-Liss, Inc. 2005
CommentsInsufficient information provided to verify exact probe sequence. Sequence shown is entire coding region from ENSEMBL ENSGALT00000006103
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 25
Gut
Splanchnic Mesoderm
 
31-42
stage 36
stage 39
stage 42
Gut
Liver
Veins
extrahepatic bile duct
intrahepatic bile duct
portal vein

Entry 3

GEISHA IdKeratin.McLarren.2003Data SourcePublication
Complete cDNA Template Probeshow
AATTCGCGGCCGATCACAGGCATAAAAGAGCTGAGGTGGGGGAAAGGAACTCGCATTCCTGCCTCAGGATCACAAACTA
CAGCGCGCTTCAGGTCCTCGGCATTCCCCTCCATGGCGACTTACAGCTTCAGGCAAACCACCTCCTCCGTGGCAGGGGG
ACCCTGCGGCCGCTCGCTCCGTTTGGGTGGCGGCTCCTTCAGGGCTCCGAGCATCCATGGGGGATCCGGTGGCAGGGGA
GTGTCAGTCTCTTCCGCCAGATTTGTCTCTTCTGGCCTAGGAAGCGGCCTGGGAGGCGGATATGGAGGTGCCTTCAGCA
GCAGCTTTAGTGCAGGCTTCGGTGGTGGCTATGGCGGGGGCTTGGGCTCTGGTGACGGTCTCCTCTCAGGGAATGAAAA
GACAACGATGCAAAACCTGAATGACCGCCTCGCGTCCTACCTGGACAAAGTGCGTGCGTTGGAAGAAGCAAACTCAGAT
CTTGAAACTAAAATCCGGGAGTGGTACCTAAAACAAGGACCAGGCCCTGCCCGAGACTACAGCCCTTATTACAAGGCTA
TTGAAGACCTCCGAGACCAGATCCTTGCTGCCACTATCGACAACTCGAAGGTTGTCCTGCAGATTGACAATGCCAGACT
GGCCGCTGACGACTTCAAGACCAAGTTTGAAACAGAGCAAGCTCTTCGCATGAGCGTGGAGGCCGACATCAACGGCCTG
CGCAGGGTGCTGGACGAACTGACGCTGGCGAGGACCGACCTGGAGCTGCAGATTGAGAACCTGAAGGAGGAGCTGGCCT
ACCTGAAGAAGAACCACGAGGAGGAAATGAGTGCCCTGGGAGGACAGGTAGCCAGCCAAGTCAGTGTGGAAGTGGACTC
TGCTCCAGGCATTGACCTGTCCAAGATCCTGGCCGATATGAGAGACCAGTATGAACACATGGCGGAGAAGAACAGGAAG
GATGCTGAGGCCTGGTTCCACAGTAAGACTGAGGAGCTGAACCGTGAGTTAGCCGTCAATACCGAACAGCTACAGAGCA
GCAAGTCTGAAGTCACTGACCTGAGACGCACCCTCCAAGGGCTGGAGATAGAGCTGCAGTCCCAGCTCAGCATGAAAGG
CGCGCTGGAGAGCACCCTGGCAGACACCGAAGGGCGTTACGGCGCACAACTGGCGCAGATCCAGGACATGATTGGCAGC
ATTGAGGCGCAGCTGGCTGAGCTCCGCGCTGATATGGAGCGCCAGAACAGCGAATACAAGATGCTCATGGATATCAAGA
CCCGTCTGGAGCAGGAGATCGCTACTTACCGGCAGCTCCTGGAGGGTCAGGAGTCCCAGTTGTTTGGATCCCTTTCTGG
ATCTCCCGACAAAAGAGACAAGCCGGCAGATGGAAAATAATACTGAAAGTCCCATAACTGTCATCTTCAAGATGAGGGA
AAAAAAGGAATTAAAATGCAGAGGAATCACACTAAACTGCTGGAAATTGAGTGCACAGAGAATCCTTGACTACACAGAG
TTTAAGTAGATTGGTTCATTTAGCAGCGATTAATTTGCAGACTAGGTTAGGCTTTTAATTACTTCCAGTTCTTTCTTGT
ACTGAAATGCTGTATCTATTCCAATAAAGATGATCTTGCAAAAAAAAA
CitationMcLarren KW, Litsiou A, Streit A. DLX5 positions the neural crest and preplacode region at the border of the neural plate. Dev Biol. 2003 Jul 1;259(1):34-47.
CopyrightCopyright © 2003 Elsevier Science (USA). All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205009).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7
stage 7
stage 7
Ectoderm
Lateral Nonneural Ectoderm
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.2612

Mouse

EmageMGI:96693
EurexpressMGI:96693
MGI GXDMGI:96693

Frog

Xenbase490359

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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