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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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CXCL14
C-X-C motif chemokine ligand 14

Gene

Official Symbol	CXCL14
Official Full Name	C-X-C motif chemokine ligand 14
CGNC ID	4774
also known as	JSC, C-X-C motif chemokine 14\|chemokine (C-X-C motif) ligand 14\|jun-suppressed chemokine
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204712
Polypeptide	NP_990043
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.2720

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	9547	ENSG00000145824		MIM:604186
Mouse	57266	ENSMUSG00000021508	All phenotypic alleles (4):Targeted, knock-out(3) Targeted, other(1)	MGI:1888514
Xenopus	100125115, 444627			944198
Zebrafish	58151	ENSDARG00000056627	ZDB-GENE-000619-1	ZFIN:ZDB-GENE-000619-1

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	395451
Ensembl Gene
KEGG	gga:395451

Entry 1

GEISHA Id	CXCL14.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	GAACACAAGACAGAACCCCGC
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGATCCCAGCACTGCCCCGTTG	cDNA Template Length	816
Forward cDNA Template Probe	show GGGGCTGCNATGTGACAACAGCCCTGAGGCTTCNCCATTGCCAAAGGTTGAGGGATGCAGCTGGAGAATACCTTACAAA CATTGTCTAATGAGCTTATAAAGCTCAATTGCGATCATAGTGAAGTATGAATGAATAACAATTAAAAAAAAAAGCAGGA AACAACAAAACCAAACCANCCAAACCANCCAAACCTCTTTAAAANGCCAAANAANANTTGTTTTTTCCCCACCCTNGGT ACAANGCAGGCAGGTGTGAAATCTGAAGTGCANCAGANGCNCANGGAANCTGGAANCCTTTTGCNCGTGGCTATAAAAN GTAAAAACNGACCCTNGGTAAAAAGNGCTTTANAANANTATANAATTTGNGTCTTANGTCNGTGAAANANAAATCATCT TCNGCANAGCCCAGTCCTACGTCAGCCAAGGGAGTCCTCTCCATTCCTCGCACCGCCGCCTCCTATTCTTCNNAAACCC NGCCCTTCTCCTTCCANACNCGGNACCACTTGACCNGCCTCNCNGNGTTCNGGCNTTNGGGGTTCAGGCAGTGCTGCTG CTCACCTCTCACTTTNGTCCNCAGGGTCNCGATAANCATCNCCNCCNCACAAAANGGGTACCTCGGTTTTNTTTCCANC TTCCGNACNTTAAANAATCTTATTTTCGGCCCTTTCCTCGANCATTTGCNCTTTACNCCTTCTGCNCNGGCTAAGCACA TCGCGATGACCANCNAAANCAAGGCTGCTGTCAGGAGCTTCNTGGCGAGCCGGCAGGTACCCNAGCGCGCNCAGCGGGG GTTCTNNANTNGGGGTTCAAA

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

Primitive Streak

7-12

stage 8

stage 9

stage 10

Amnion
Ectoderm
Extraembryonic
Neural Crest
Neural Plate/Tube
Primitive Streak
Somites

13-18

stage 13

stage 14

stage 15

Amnion
Ectoderm
Neural Crest
Pharyngeal Arches and Clefts

19-24

stage 19

stage 20

Ectoderm
Pharyngeal Arches and Clefts
Pineal Gland
Spinal Cord
Surface Ectoderm

stage 25

Ectoderm
Limb Buds
Pharyngeal Arches and Clefts
Pineal Gland
Spinal Cord

Entry 2

GEISHA Id	CXCL14.García-Andrés.2010	Data Source	Publication
Complete cDNA Template Probe	show GCGGCAGAGCCCGGGCAGCAGCACCGCCCGCAGCCGCTCCTTCCCACCTCGAGGACGGGAACACAAGACAGAACCCCGC TGCGTGCGCTCGGGTACCTGCCGGCTCGCCATGAAGCTCCTGACAGCAGCCTTGCTTCTGCTGGTCATCGCGATGTGCT TAGCCAGTGCAGAAGGAGTAAAGTGCAAATGCTCAAGGAAAGGGCCGAAAATAAGATTCTCTAACGTACGGAAGCTGGA AATAAAACCGAGGTACCCATTTTGTGTGGAGGAGATGATTATCGTGACCCTGTGGACGAAAGTGAGAGGTGAGCAGCAG CACTGCCTGAACCCCAAACGCCAGAACACAGTGAGGCTGCTCAAGTGGTACCGAGTATGGAAGGAGAAGGGCAGGGTTT ATGAAGAATAGGAGGCGGCGGTGCGAGGAATGGAGAGGACTCCCTTGGCTGACGTAGGACTGGGCTCTGCAGAAGATGA TTTCTCTCTCACAGACATAAGACAAATTCTATATTATTATAAAGCACTTTTTACCAAGGGTCAGTTTTTACATTTTATA GCCACGTGCAAAAGGCTTCCAGATTCCATGAGCATCTGTTGCACTTCAGATTTCACACCTGCCTGCATTGTACCGAGGC TGGGGAAAAAACAACTCTTGTTTGGCATTTTAAAGAGGTTTGGTTGGTTTGGTTTTGTTGTTTCCTGCTTTTTTTTTTA ATTGTTATTCATTCATACTTCACTATGATCGCAATTGAGCTTTATAAGCTCATTAGACAATGTTTGTAAGGTATTCTCC AGCTGCATCCCTCACCCCTTGGCAATGGGGAAGCCTCAGGGCTGTTGGTCACATTGGCAGCCCCCAACGGGGCAGTGCT GGGATAGAACAGGAGCTGAGCTGGGTGAGGTGCCACCAACACAGTGGCTGTGGTGCAGAAGTGAGGTCCCTTGGCTCAT CAGCAAGGGAGTGCAAGCATCACTCATGTACCTCTTCCTTAACAGACCTGGGGTCTTGCTGCAAGGTGAAGTGGTCCAC CCTCCCATCTAACATTTCCTACACTAGAGAGCATTTCTAGGTCTTTTTTGTTACTAAGAACATGCTTAATTTCTTTTCT TCCTCCACCTGAAGCTCTCCCACAAAGTTTGTGGCTTCAGGACTCAGACACTTCCAGCTTCAAGACTATTGTGTACGAT TTCCTAGATTTGTAGCAAAAAAAGCCTTTAAAAGGCAACTTTTTATGAAAAATATGGTAGGGCAAACATATAAATACCT ATGTTTTAGTCACAATACAACATATTCATTATTTTGAATGTAATACTTCAATGTTAAGCAAAGCATTCCTCTTTTTAAA AATAACAAAACTACCTTTTCATTTGTAAATACACTATAGGAAGTCTCCCTATCCTATCTTTCTGTATAATGTACTGTAC TGCTAAATTATCATATGCTATTTAAATGTTTGAGATACTTAGAAGGTTGCATGCAGATTTCATATTTCTTTCTAAGACA AATGGAAAAAAGTAATAAAA
Citation	García-Andrés C, Torres M. Comparative expression pattern analysis of the highly conserved chemokines SDF1 and CXCL14 during amniote embryonic development. Dev Dyn. 2010 Oct;239(10):2769-77.
Copyright	© 2010 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204712).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-18

stage 17

Arteries
Cranial Ganglia
Limb Buds
Paraxial Mesoderm
Pharyngeal Arches and Clefts

19-24

stage 20

stage 22

stage 24

Arteries
Cranial Ganglia
Dermomyotome
Forebrain
Hindbrain
Leg
Leg Ectoderm
Limb Buds
Midbrain
Pharyngeal Arches and Clefts
Pituitary (Rudiment)
Renal
Sclerotome
Somatic Mesoderm
Somites
Spinal Cord
Surface Ectoderm

Rp, Rathkes pouch
Rp, Rathkes pouch
baa, branchial arch artery
ectoderm and neuroectoderm
nr, nephrogenic ridge
tg, trigeminal ganglion; ba, brachial arch
trigeminal ganglion, encephalon

25-30

stage 27

stage 30

Leg
Leg AER

dorsal view
dorsal view of hindlimb
ventral view
ventral view of hindlimb

31-35

stage 31

stage 32

stage 35

Leg
Leg Ectoderm
Leg Mesenchyme

tendon
digits level
dorsal view
extensor tendon
metacarpal II
ventral view
zeugopod level

Entry 3

GEISHA Id	CXCL14.Alev.2010	Data Source	Publication
Complete cDNA Template Probe	show ACAACTCTTGTTTGGCATTTTAAAGAGGTTTGGTTGGTTTGGTTTTGTTGTTTCCTGCTTTTTTTTTTAATTGTTATTC ATTCATACTTCACTATGATCGCAATTGAGCTTTATAAGCTCATTAGACAATGTTTGTAAGGTATTCTCCAGCTGCATCC CTCACCCCTTGGCAATGGGGAAGCCTCAGGGCTGTTGGTCACATTGGCAGCCCCCAACGGGGCAGTGCTGGGATAGAAC AGGAGCTGAGCTGGGTGAGGTGCCACCAACACAGTGGCTGTGGTGCAGAAGTGAGGTCCCTTGGCTCATCAGCAAGGGA GTGCAAGCATCACTCATGTACCTCTTCCTTAACAGACCTGGGGTCTTGCTGCAAGGTGAAGTGGTCCACCCTCCCATCT AACATTTCCTACACTAGAGAGCATTTCTAGGTCTTTTTTGTTACTAAGAACATGCTTAATTTCTTTTCTTCCTCCACCT GAAGCTCTCCCACAAAGTTTGTGGCTTCAGGACTCAGACACTTCCAGCTTCAAGACTATTGTGTAC
Citation	Alev C, Wu Y, Kasukawa T, Jakt LM, Ueda HR, Sheng G. Transcriptomic landscape of the primitive streak. Development. 2010 Sep 1;137(17):2863-74. Epub 2010 Jul 28.
Copyright	Published by The Company of Biologists 2010. This material is protected by a copyright retained by the authors. Permission granted by Dr. G Sheng.
Comments	The probe for CXCL14 was amplified by PCR using the following primers: Forward Primer: ACAACTCTTGTTTGGCATTT Reverse Primer: GTCTTGAAGCTGGAAGTGTC Base Pairs Numbers 643 - 1172

Stage

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Location (click to highlight)

Comments (click to highlight)

stage 4

Primitive Streak

Entry 4

GEISHA Id	CXCL14.Gordon.2011	Data Source	Publication
Complete cDNA Template Probe	show GCGGCAGAGCCCGGGCAGCAGCACCGCCCGCAGCCGCTCCTTCCCACCTCGAGGACGGGAACACAAGACAGAACCCCGC TGCGTGCGCTCGGGTACCTGCCGGCTCGCCATGAAGCTCCTGACAGCAGCCTTGCTTCTGCTGGTCATCGCGATGTGCT TAGCCAGTGCAGAAGGAGTAAAGTGCAAATGCTCAAGGAAAGGGCCGAAAATAAGATTCTCTAACGTACGGAAGCTGGA AATAAAACCGAGGTACCCATTTTGTGTGGAGGAGATGATTATCGTGACCCTGTGGACGAAAGTGAGAGGTGAGCAGCAG CACTGCCTGAACCCCAAACGCCAGAACACAGTGAGGCTGCTCAAGTGGTACCGAGTATGGAAGGAGAAGGGCAGGGTTT ATGAAGAATAGGAGGCGGCGGTGCGAGGAATGGAGAGGACTCCCTTGGCTGACGTAGGACTGGGCTCTGCAGAAGATGA TTTCTCTCTCACAGACATAAGACAAATTCTATATTATTATAAAGCACTTTTTACCAAGGGTCAGTTTTTACATTTTATA GCCACGTGCAAAAGGCTTCCAGATTCCATGAGCATCTGTTGCACTTCAGATTTCACACCTGCCTGCATTGTACCGAGGC TGGGGAAAAAACAACTCTTGTTTGGCATTTTAAAGAGGTTTGGTTGGTTTGGTTTTGTTGTTTCCTGCTTTTTTTTTTA ATTGTTATTCATTCATACTTCACTATGATCGCAATTGAGCTTTATAAGCTCATTAGACAATGTTTGTAAGGTATTCTCC AGCTGCATCCCTCACCCCTTGGCAATGGGGAAGCCTCAGGGCTGTTGGTCACATTGGCAGCCCCCAACGGGGCAGTGCT GGGATAGAACAGGAGCTGAGCTGGGTGAGGTGCCACCAACACAGTGGCTGTGGTGCAGAAGTGAGGTCCCTTGGCTCAT CAGCAAGGGAGTGCAAGCATCACTCATGTACCTCTTCCTTAACAGACCTGGGGTCTTGCTGCAAGGTGAAGTGGTCCAC CCTCCCATCTAACATTTCCTACACTAGAGAGCATTTCTAGGTCTTTTTTGTTACTAAGAACATGCTTAATTTCTTTTCT TCCTCCACCTGAAGCTCTCCCACAAAGTTTGTGGCTTCAGGACTCAGACACTTCCAGCTTCAAGACTATTGTGTACGAT TTCCTAGATTTGTAGCAAAAAAAGCCTTTAAAAGGCAACTTTTTATGAAAAATATGGTAGGGCAAACATATAAATACCT ATGTTTTAGTCACAATACAACATATTCATTATTTTGAATGTAATACTTCAATGTTAAGCAAAGCATTCCTCTTTTTAAA AATAACAAAACTACCTTTTCATTTGTAAATACACTATAGGAAGTCTCCCTATCCTATCTTTCTGTATAATGTACTGTAC TGCTAAATTATCATATGCTATTTAAATGTTTGAGATACTTAGAAGGTTGCATGCAGATTTCATATTTCTTTCTAAGACA AATGGAAAAAAGTAATAAAA
Citation	Gordon CT, Wade C, Brinas I, Farlie PG., CXCL14 expression during chick embryonic development. Int J Dev Biol. 2011;55(3):335-40.
Copyright	With permission from the authors, who hold the copyright, and from UBC Press.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204712.2 ).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-12

stage 9

stage 10

stage 12

Cranial Ganglia
Isthmus/MHB
Mesencephalon
Somites

13-18

stage 13

stage 18

Cranial Ganglia
Cranial PNS
Diencephalon
Ear/Otic Placode
Hindbrain
Mesencephalon
Pharyngeal Arches and Clefts
Somites

19-24

stage 21

stage 22

stage 23

stage 24

Cranial Ganglia
Diencephalon
Ear/Otic Placode
Hindbrain
Isthmus/MHB
Leg
Mesencephalon
Midbrain
Pharyngeal Arches and Clefts
Somites
Spinal Cord
Surface Ectoderm
Telencephalon
Wing

choroid plexus

25-30

stage 26

stage 27

stage 28

stage 30

Ear/Otic Placode
Hindbrain
Limb Buds
Mesencephalon
Pharyngeal Arches and Clefts
Surface Ectoderm
Wing
Wing Ectoderm
Wing Mesenchyme

Entry 5

GEISHA Id	CXCL14.Ojeda.2013	Data Source	Publication
Complete cDNA Template Probe	show GATTCTCTAACGTACGGAAGCTGGAAATAAAACCGAGGTACCCATTTTGTGTGGAGGAGATGATTATCGTGACCCTGTG GACGAAAGTGAGAGGTGAGCAGCAGCACTGCCTGAACCCCAAACGCCAGAACACAGTGAGGCTGCTCAAGTGGTACCGA GTATGGAAGGAGAAGGGCAGGGTTTATGAAGAATAGGAGGCGGCGGTGCGAGGAATGGAGAGGACTCCCTTGGCTGACG TAGGACTGGGCTCTGCAGAAGATGATTTCTCTCTCACAGACATAAGACAAATTCTATATTATTATAAAGCACTTTTTAC CAAGGGTCAGTTTTTACATTTTATAGCCACGTGCAAAAGGCTTCCAGATTCCATGAGCATCTGTTGCACTTCAGATTTC ACACCTGCCTGCATTGTACCGAGGCTGGGGAAAAAACAACTCTTGTTTGGCATTTTAAAGAGGTTTGGTTGGTTTGGTT TTGTTGTTTCCTGCTTTTTTTTTTAATTGTTATTCATTCATACTTCACTATGATCGCAATTGAGCTTTATAAGCTCATT AGACAATGTTTGTAAGGTATTCTCCAGCTGCATCCCTCACCCCTTGGCAATGGGGAAGCCTCAGGGCTGTTGGTCACAT TGGCAGCCCCCAACGGGGCAGTGCTGGGATAGAACAGGAGCTGAGCTGGGTGAGGTGCCACCAACACAGTGGCTGTGGT GCAGAAGTGAGGTCCCTTGGCTCATCAGCAAGGGAGTGCAAGCATCACTCATGTACCTCT
Citation	Ojeda AF, Munjaal RP, Lwigale PY. Expression of CXCL12 and CXCL14 during eye development in chick and mouse. Gene Expr Patterns. 2013 Dec;13(8):303-10. Epub 2013 May 30.
Copyright	Copyright © 2020 Elsevier B.V.
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Ojeda et al. 2013. CXC14 is also known as JSC in NCBI.