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CXCR4 C-X-C motif chemokine receptor 4 The human orthologue of this gene is associated with the following human disease:
Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol CXCR4 Official Full Name C-X-C motif chemokine receptor 4 CGNC ID 9386 also known as C-X-C chemokine receptor type 4|chemokine (C-X-C motif) receptor 4|chemokine receptor CXCR4, chemokine (C-X-C motif) receptor 4 , CXCR4 gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Entrez Gene Ensembl Gene Genetic Phenotypes MOD Fruit Fly Human 7852 ENSG00000121966 MIM:162643 MIM:162643 Mouse 12767 ENSMUSG00000045382 All phenotypic alleles (8 ):Targeted, knock-out(5 ) Targeted, other(3 ) MGI:109563 Xenopus 100038176 , 100192360 , 380373 489916 Zebrafish 100332872 , 100332777 , 140747 , 114447 ENSDARG00000057633 , ENSDARG00000041959 ZDB-GENE-020102-1 , ZDB-GENE-010614-1 ZFIN:ZDB-GENE-020102-1 , ZFIN:ZDB-GENE-010614-1
Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id CXCR4.UApcr Data Source GEISHA ISH Analysis Forward cDNA Template Primer TGCTTGGAGTCATCAGACATCG Reverse cDNA Template Primer ATTAACCCTCACTAAAGGACCCACAACAAAAACAACGAGC cDNA Template Length 728 Forward cDNA Template Probe show ACATGGTACAGNAGGCAGCTTTAGTTATAAGGTGCCATTTCTACAGCAGAGTTAAGCTATCGTAAACCAAACATCTAGT AAGGCAAAAATATTCAGCCAACATTTAAGAATTTAACAACATTGAAACCATTTACATATAAACAGAAATATTTTCTAAT CTTTTAACAGTCACTTGCTACAATCCAGTGTTTAGTTCACATATCTATACAAACAAACACTCAAGCTTTTGTGAACTAA CCACTTGTCCACAGGACCTGCCTAGACAGTTTATCAATACAAAAGTTTCATATAAATAAGTCAATTAAACTTCACAAAG ACTAAAAGAAGCAATAAAAAATTCCAACTGTAAAATAAATCTGTACAATATGGTCAGTCTTGTTTTTCTGAGATCTTGA GCAACTTTTAAAGTGTCTATTTATGAAGGGATGGCAAGGGAAAGCGTTAGCTGGAATGGAAACTTGAAGACTCTGACTC TGTAGAAACAGAAGAATGTCCCCCACGTTTGCTTTTTGAAAGAATCTTGAGGCTTGATCCTCTGCTAACAGATGTCAAG GCATTTTGTGCTGATGTTTTGAACTTGGCACCCAGGAAGGCGTAAAGAATTGGATTGAGGCAGCAATGGAAGAACGCAA GGGCTTCTGTGATAGAGATCCATTTGTGCACGATTGTGTCCAAGCTGCAGCGATGTCTGATG
Entry 2 GEISHA Id CXCR4.Tonegawa.2003 Data Source Publication Complete cDNA Template Probe show TGCGCTCGTGGCGCTCGGACGGCCCGGACCTACTCGGTGCTCGGAGTATGGACGGCAGCATGGACGGTTTGGATCTGTC CTCTGGCATACTCATTGAATTTGCTGACAATGGCTCGGAGGAGATTGGCTCAGCTGACTATGGAGACTATGGAGAGCCG TGCTTTCAGCATGAAAACGCTGATTTCAACCGGATCTTCTTGCCAACCATCTACTCCATCATCTTCCTAACAGGAATAA TCGGGAATGGATTGGTTATCATTGTTATGGGCTACCAGAAGAAGCAAAGAAGCATGACTGATAAATACAGGCTGCACCT CTCTGTGGCTGACCTCCTCTTTGTCATCACCTTGCCATTCTGGTCTGTGGATGCAGCCATAAGCTGGTACTTCGGAAAT GTCCTGTGTAAGGCAGTTCATGTCATTTACACAGTCAACCTCTATAGCAGTGTCTTGATTTTGGCTTTCATAAGTTTAG ATCGTTACCTGGCAATAGTCCATGCCACCAACAGCCAGCGACCCCGAAAGCTGTTGGCTGAGAAGATTGTGTATGTGGG TGTCTGGCTGCCAGCTGTGCTTCTCACAGTGCCTGATATAATTTTTGCCAGTACGAGTGAAGTAGAAGGACGGTATCTC TGTGATCGCATGTACCCTCATGACAACTGGCTGATTTCTTTCAGATTCCAGCATATCTTGGTAGGACTTGTCTTGCCCG GTCTAATAATCCTGACTTGCTATTGTATTATCATATCTAAGCTGTCACATTCAAAAGGCCACCAGAAGCGCAAAGCCTT GAAGACAACAGTTATCCTCATTCTTACCTTCTTTGCCTGTTGGCTGCCGTATTACATTGGCATCAGCATAGACACGTTC ATCTTGCTTGGAGTCATCAGACATCGCTGCAGCTTGGACACAATCGTGCACAAATGGATCTCTATCACAGAAGCCCTTG CGTTCTTCCATTGCTGCCTCAATCCAATTCTTTACGCCTTCCTGGGTGCCAAGTTCAAAACATCAGCACAAAATGCCTT GACATCTGTTAGCAGAGGATCAAGCCTCAAGATTCTTTCAAAAAGCAAACGTGGGGGACATTCTTCTGTTTCTACAGAG TCAGAGTCTTCAAGTTTCCATTCCAGCTAACGCTTTCCCTTGCCATCCCTTCATAAATAGACACTTTAAAAGTTGCTCA AGATCTCAGAAAAACAAGACTGACCATATTGTACAGATTTATTTTACAGTTGGAATTTTTTATTGCTTCTTTTAGTCTT TGTGAAGTTTAATTGACTTATTTATATGAAACTTTTGTATTGATAAACTGTCTAGGCAGGT
Citation Tonegawa A, Kasai T, Takahashi Y. Systematic screening for signaling molecules expressed during somitogenesis by the signal sequence trap method. Dev Biol. 2003 Oct 1;262(1):32-50. Copyright "Reprinted from DEVELOPMENTAL BIOLOGY, 262, Tonegawa A, Kasai T, Takahashi Y. Systematic screening for signaling molecules expressed during somitogenesis by the signal sequence trap method. 32-50, Copyright (2003), with permission from Elsevier".
Copyright © 2003 Elsevier B.V. All rights reserved. Comments Accession number was given in the paper.
Entry 3 GEISHA Id CXCR4.Vasyutina.2005 Data Source Publication Complete cDNA Template Probe show TGCGCTCGTGGCGCTCGGACGGCCCGGACCTACTCGGTGCTCGGAGTATGGACGGCAGCATGGACGGTTTGGATCTGTC CTCTGGCATACTCATTGAATTTGCTGACAATGGCTCGGAGGAGATTGGCTCAGCTGACTATGGAGACTATGGAGAGCCG TGCTTTCAGCATGAAAACGCTGATTTCAACCGGATCTTCTTGCCAACCATCTACTCCATCATCTTCCTAACAGGAATAA TCGGGAATGGATTGGTTATCATTGTTATGGGCTACCAGAAGAAGCAAAGAAGCATGACTGATAAATACAGGCTGCACCT CTCTGTGGCTGACCTCCTCTTTGTCATCACCTTGCCATTCTGGTCTGTGGATGCAGCCATAAGCTGGTACTTCGGAAAT GTCCTGTGTAAGGCAGTTCATGTCATTTACACAGTCAACCTCTATAGCAGTGTCTTGATTTTGGCTTTCATAAGTTTAG ATCGTTACCTGGCAATAGTCCATGCCACCAACAGCCAGCGACCCCGAAAGCTGTTGGCTGAGAAGATTGTGTATGTGGG TGTCTGGCTGCCAGCTGTGCTTCTCACAGTGCCTGATATAATTTTTGCCAGTACGAGTGAAGTAGAAGGACGGTATCTC TGTGATCGCATGTACCCTCATGACAACTGGCTGATTTCTTTCAGATTCCAGCATATCTTGGTAGGACTTGTCTTGCCCG GTCTAATAATCCTGACTTGCTATTGTATTATCATATCTAAGCTGTCACATTCAAAAGGCCACCAGAAGCGCAAAGCCTT GAAGACAACAGTTATCCTCATTCTTACCTTCTTTGCCTGTTGGCTGCCGTATTACATTGGCATCAGCATAGACACGTTC ATCTTGCTTGGAGTCATCAGACATCGCTGCAGCTTGGACACAATCGTGCACAAATGGATCTCTATCACAGAAGCCCTTG CGTTCTTCCATTGCTGCCTCAATCCAATTCTTTACGCCTTCCTGGGTGCCAAGTTCAAAACATCAGCACAAAATGCCTT GACATCTGTTAGCAGAGGATCAAGCCTCAAGATTCTTTCAAAAAGCAAACGTGGGGGACATTCTTCTGTTTCTACAGAG TCAGAGTCTTCAAGTTTCCATTCCAGCTAACGCTTTCCCTTGCCATCCCTTCATAAATAGACACTTTAAAAGTTGCTCA AGATCTCAGAAAAACAAGACTGACCATATTGTACAGATTTATTTTACAGTTGGAATTTTTTATTGCTTCTTTTAGTCTT TGTGAAGTTTAATTGACTTATTTATATGAAACTTTTGTATTGATAAACTGTCTAGGCAGGT
Citation Vasyutina E, Stebler J, Brand-Saberi B, Schulz S, Raz E, Birchmeier C. CXCR4 and Gab1 cooperate to control the development of migrating muscle progenitor cells. Genes Dev. 2005 September 15; 19(18): 21872198. Copyright Copyright © 2005, Cold Spring Harbor Laboratory Press Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #AF294794.1 ).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25 stage 25
stage 25
stage 25
Myotome Wing Mesenchyme
Data from NCBI Unigene EST Profile Unigene ID: Gga.2305
Mouse Frog Fruit Fly Zebra Finch Zebrafish