GEISHA - A Chicken Embryo Gene Expression Database
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CYP26A1
cytochrome P450 family 26 subfamily A member 1

Gene
Official SymbolCYP26A1
Official Full Namecytochrome P450 family 26 subfamily A member 1
CGNC ID5082
also known asCYP26A, cytochrome P450 26A1|cytochrome P450, family 26, subfamily A, polypeptide 1|retinoic acid-degrading enzyme CYP26, Retinoic acid-degrading enzyme CYP26, Cytochrome P450 26A1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001001129
PolypeptideNP_001001129
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.331
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human1592ENSG00000095596MIM:602239
Mouse13082ENSMUSG00000024987All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:1096359
Xenopus548901, 496314855582
Zebrafish30381ENSDARG00000033999ZDB-GENE-990415-44ZFIN:ZDB-GENE-990415-44
Gene Ontology
Molecular Functionheme binding, iron ion binding, monooxygenase activity, more...oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Biological Processretinoic acid catabolic process
Cellular Componentendoplasmic reticulum membrane
Links to other databases
Entrez Gene408183
Ensembl Gene
KEGGgga:408183

Entry 1

GEISHA IdCyp26A1.Reijntjes.2004Data SourcePublication
Complete cDNA Template Probeshow
ATGGGCTTCTCCGCTCTGGTCGCCAGCGCCCTGTGCACCTTCCTGCTGCCCCTGCTGCTCTTCCTGGCCGCCGTCCGGC
TCTGGGACCTGTACTGCGCCAGCGGCCGCGACCCCAGCTGTCCGCTGCCGTTGCCCCCGGGCACCATGGGGCTGCCCTT
CTTCGGGGAGACGCTGCAGATGGTGCTGCAGCGGCGGAAATTCCTGCAGATGAAGCGCAGGAAATACGGCTTCATCTAC
AAGACTCACCTCTTTGGGCGGCCCACTGTGCGGGTGATGGGCGCTGAGAATGTGCGGCACATCCTGCTGGGCGAGCACC
GCCTGGTCTCCGTGCAGTGGCCCGCCTCGGTGCGCACCATCTTGGGCTCGGGCTGCCTCTCCAACCTTCACAACGGGCA
GCACAAACACCGCAAAAAGGTGATCATGCAGGCCTTCTCCCGGGATGCCCTGCAGCACTACGTGCCTGTCATCCAAGAG
GAGGTGAGTGCCTGCCTGGCACAGTGGCTGGGTGCCGGGCCCTGCCTGCTGGTGTATCCCGAGGTGAAGCGCCTCATGT
TCCGCATCGCCATGCGCATCCTGCTGGGCTTCCAGCCCCGCCAGGCCAGCCCCGATGGTGAGCAGCAGCTGGTGGAGGC
CTTCGAGGAGATGATCCGCAACCTCTTCTCCCTCCCCATCGATGTGCCTTTCAGTGGGCTCTACCGGGGCCTGAGGGCG
CGCAACATCATCCATGCCAAGATTGAGGAGAACATCCGTGCCAAGATGGCCCGCAAGGAGCCCGAGGGTGGCTACAAGG
ATGCACTGCAGCTGTTGATGGAGCACACACAGGGTAATGGAGAGCAGCTCAACATGCAGGAGCTGAAGGAGTCTGCCAC
AGAGCTGCTCTTTGGAGGTCACGAAACCACGGCCAGTGCTGCTACATCACTGATTGCCTTCCTAGGGCTCCACCATGAT
GTTCTGCAGAAAGTGAGGAAGGAGCTGCAATTAAAGGGGTTACTGTCTGGTCCCAACCAAGAAAAACAATTGAACATGG
AGTTCTTGGAGCAGCTGAAGTACACAGGCTGTGTTATCAAGGAAACCCTCAGGCTGAGCCCTCCTGTTCCTGGAGGATT
CCGAATTGCACTCAAGACCCTTGAGCTGAATGGTTACCAGATCCCCAAAGGCTGGAATGTTATTTACAGTATCTGCGAT
ACCCACGATGTGGCCGATCTCTTTACCGACAAGGACGAGTTCAACCCGGACCGCTTCATGTCTCCGTCTCCGGAGGACT
CCTCTAGGTTCAGTTTCATTCCTTTCGGTGGGGGCTTGAGGAGCTGCGTAGGCAAAGAGTTTGCAAAAGTCCTTCTAAA
AATATTTACGGTGGAGCTGGCGCGGAGCTGTGACTGGCAGCTGCTAAATGGACCTCCTACAATGAAAACGGGCCCCATA
GTGTACCCTGTGGACAATCTGCCTGCCAAATTCATAGGTTTCAGCGGCCAAATCTGA
CitationReijntjes S, Gale E, Maden M. Generating gradients of retinoic acid in the chick embryo: Cyp26C1 expression and a comparative analysis of the Cyp26 enzymes. Dev Dyn. 2004 Jul;230(3):509-17.
CopyrightWiley-Liss, Inc. 2004
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_001001129).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
stage 6
Neural Plate/Tube
Cyp26A1 (in purple)
Cyp26C1 (in turquoise)

Entry 2

GEISHA IdCyp26A1.Maden.2007Data SourcePublication
Complete cDNA Template Probeshow
ATGGGCTTCTCCGCTCTGGTCGCCAGCGCCCTGTGCACCTTCCTGCTGCCCCTGCTGCTCTTCCTGGCCGCCGTCCGGC
TCTGGGACCTGTACTGCGCCAGCGGCCGCGACCCCAGCTGTCCGCTGCCGTTGCCCCCGGGCACCATGGGGCTGCCCTT
CTTCGGGGAGACGCTGCAGATGGTGCTGCAGCGGCGGAAATTCCTGCAGATGAAGCGCAGGAAATACGGCTTCATCTAC
AAGACTCACCTCTTTGGGCGGCCCACTGTGCGGGTGATGGGCGCTGAGAATGTGCGGCACATCCTGCTGGGCGAGCACC
GCCTGGTCTCCGTGCAGTGGCCCGCCTCGGTGCGCACCATCTTGGGCTCGGGCTGCCTCTCCAACCTTCACAACGGGCA
GCACAAACACCGCAAAAAGGTGATCATGCAGGCCTTCTCCCGGGATGCCCTGCAGCACTACGTGCCTGTCATCCAAGAG
GAGGTGAGTGCCTGCCTGGCACAGTGGCTGGGTGCCGGGCCCTGCCTGCTGGTGTATCCCGAGGTGAAGCGCCTCATGT
TCCGCATCGCCATGCGCATCCTGCTGGGCTTCCAGCCCCGCCAGGCCAGCCCCGATGGTGAGCAGCAGCTGGTGGAGGC
CTTCGAGGAGATGATCCGCAACCTCTTCTCCCTCCCCATCGATGTGCCTTTCAGTGGGCTCTACCGGGGCCTGAGGGCG
CGCAACATCATCCATGCCAAGATTGAGGAGAACATCCGTGCCAAGATGGCCCGCAAGGAGCCCGAGGGTGGCTACAAGG
ATGCACTGCAGCTGTTGATGGAGCACACACAGGGTAATGGAGAGCAGCTCAACATGCAGGAGCTGAAGGAGTCTGCCAC
AGAGCTGCTCTTTGGAGGTCACGAAACCACGGCCAGTGCTGCTACATCACTGATTGCCTTCCTAGGGCTCCACCATGAT
GTTCTGCAGAAAGTGAGGAAGGAGCTGCAATTAAAGGGGTTACTGTCTGGTCCCAACCAAGAAAAACAATTGAACATGG
AGTTCTTGGAGCAGCTGAAGTACACAGGCTGTGTTATCAAGGAAACCCTCAGGCTGAGCCCTCCTGTTCCTGGAGGATT
CCGAATTGCACTCAAGACCCTTGAGCTGAATGGTTACCAGATCCCCAAAGGCTGGAATGTTATTTACAGTATCTGCGAT
ACCCACGATGTGGCCGATCTCTTTACCGACAAGGACGAGTTCAACCCGGACCGCTTCATGTCTCCGTCTCCGGAGGACT
CCTCTAGGTTCAGTTTCATTCCTTTCGGTGGGGGCTTGAGGAGCTGCGTAGGCAAAGAGTTTGCAAAAGTCCTTCTAAA
AATATTTACGGTGGAGCTGGCGCGGAGCTGTGACTGGCAGCTGCTAAATGGACCTCCTACAATGAAAACGGGCCCCATA
GTGTACCCTGTGGACAATCTGCCTGCCAAATTCATAGGTTTCAGCGGCCAAATCTGA
CitationMaden M, Blentic A, Reijntjes S, Seguin S, Gale E, Graham A. (2007). Retinoic acid is required for specification of the ventral eye field and for Rathke's pouch in the avian embryo. Int J Dev Biol. 2007;51(3):191-200.
Copyright"Reprinted from Int. J. Dev. Biol., 51, Maden M, Blentic A, Reijntjes S, Seguin S, Gale E, Graham A, Retinoic acid is required for specification of the ventral eye field and for Rathke's pouch in the avian embryo, 191-200, Copyright (2007), with permission from Copyright © 2007 UBC Press". All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_001001129). Images are quail, but sequence and map shown are chick.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Eye
Quail
31-44
stage 44
Eye
Nasal Placcode/Nerve
Fig. 2. All images for comparison.
Quail

Entry 3

GEISHA IdCyp26A1.Albazerchi.2007Data SourcePublication
Complete cDNA Template Probeshow
ATGGGCTTCTCCGCTCTGGTCGCCAGCGCCCTGTGCACCTTCCTGCTGCCCCTGCTGCTCTTCCTGGCCGCCGTCCGGC
TCTGGGACCTGTACTGCGCCAGCGGCCGCGACCCCAGCTGTCCGCTGCCGTTGCCCCCGGGCACCATGGGGCTGCCCTT
CTTCGGGGAGACGCTGCAGATGGTGCTGCAGCGGCGGAAATTCCTGCAGATGAAGCGCAGGAAATACGGCTTCATCTAC
AAGACTCACCTCTTTGGGCGGCCCACTGTGCGGGTGATGGGCGCTGAGAATGTGCGGCACATCCTGCTGGGCGAGCACC
GCCTGGTCTCCGTGCAGTGGCCCGCCTCGGTGCGCACCATCTTGGGCTCGGGCTGCCTCTCCAACCTTCACAACGGGCA
GCACAAACACCGCAAAAAGGTGATCATGCAGGCCTTCTCCCGGGATGCCCTGCAGCACTACGTGCCTGTCATCCAAGAG
GAGGTGAGTGCCTGCCTGGCACAGTGGCTGGGTGCCGGGCCCTGCCTGCTGGTGTATCCCGAGGTGAAGCGCCTCATGT
TCCGCATCGCCATGCGCATCCTGCTGGGCTTCCAGCCCCGCCAGGCCAGCCCCGATGGTGAGCAGCAGCTGGTGGAGGC
CTTCGAGGAGATGATCCGCAACCTCTTCTCCCTCCCCATCGATGTGCCTTTCAGTGGGCTCTACCGGGGCCTGAGGGCG
CGCAACATCATCCATGCCAAGATTGAGGAGAACATCCGTGCCAAGATGGCCCGCAAGGAGCCCGAGGGTGGCTACAAGG
ATGCACTGCAGCTGTTGATGGAGCACACACAGGGTAATGGAGAGCAGCTCAACATGCAGGAGCTGAAGGAGTCTGCCAC
AGAGCTGCTCTTTGGAGGTCACGAAACCACGGCCAGTGCTGCTACATCACTGATTGCCTTCCTAGGGCTCCACCATGAT
GTTCTGCAGAAAGTGAGGAAGGAGCTGCAATTAAAGGGGTTACTGTCTGGTCCCAACCAAGAAAAACAATTGAACATGG
AGTTCTTGGAGCAGCTGAAGTACACAGGCTGTGTTATCAAGGAAACCCTCAGGCTGAGCCCTCCTGTTCCTGGAGGATT
CCGAATTGCACTCAAGACCCTTGAGCTGAATGGTTACCAGATCCCCAAAGGCTGGAATGTTATTTACAGTATCTGCGAT
ACCCACGATGTGGCCGATCTCTTTACCGACAAGGACGAGTTCAACCCGGACCGCTTCATGTCTCCGTCTCCGGAGGACT
CCTCTAGGTTCAGTTTCATTCCTTTCGGTGGGGGCTTGAGGAGCTGCGTAGGCAAAGAGTTTGCAAAAGTCCTTCTAAA
AATATTTACGGTGGAGCTGGCGCGGAGCTGTGACTGGCAGCTGCTAAATGGACCTCCTACAATGAAAACGGGCCCCATA
GTGTACCCTGTGGACAATCTGCCTGCCAAATTCATAGGTTTCAGCGGCCAAATCTGA
CitationAlbazerchi A, Stern CD. A role for the hypoblast (AVE) in the initiation of neural induction, independent of its ability to position the primitive streak. Dev Biol. 2007 Jan 15;301(2):489-503.
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #NM_001001129.1). Normal expression in the embryo proper plus induced expression to the right where the graft (*) has been placed.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Neural Plate/Tube
 
4-6
stage 4
stage 5
stage 6
Forebrain
Neural Plate/Tube
 
7-8
stage 7
stage 8
Forebrain
Hensen's Node
Neural Plate/Tube
 

Entry 4

GEISHA IdCyp26.Rodriguez-Guzman.2007Data SourcePublication
Complete cDNA Template Probeshow
TACGGCTTCATCTACAAGACTCACCTCTTTGGGCGGCCCACTGTGCGGGTGATGGGCGCTGAGAATGTGCGGCACATCC
TGCTGGGCGAGCACCGCCTGGTCTCCGTGCAGTGGCCCGCCTCGGTGCGCACCATCTTGGGCTCGGGCTGCCTCTCCAA
CCTTCACAACGGGCAGCACAAACACCGCAAAAAGGTGATCATGCAGGCCTTCTCCCGGGATGCCCTGCAGCACTACGTG
CCTGTCATCCAAGAGGAGGTGAGTGCCTGCCTGGCACAGTGGCTGGGTGCCGGGCCCTGCCTGCTGGTGTATCCCGAGG
TGAAGCGCCTCATGTTCCGCATCGCCATGCGCATCCTGCTGGGCTTCCAGCCCCGCCAGGCCAGCCCCGATGGTGAGCA
GCAGCTGGTGGAGGCCTTCGAGGAGATGATCCGCAACCTCTTCTCCCTCCCCATCGATGTGCCTTTCAGTGGGCTCTAC
CGGGGCCTGAGGGCGCGCAACATCATCCATGCCAAGATTGAGGAGAACATCCGTGCCAAGATGGCCCGCAAGGAGCCCG
AGGGTGGCTACAAGGATGCACTGCAGCTGTTGATGGAGCACACACAGGGTAATGGAGAGCAGCTCAACATGCAGGAGCT
GAAGGAGTCTGCCACAGAGCTGCTCTTTGGAGGTCACGAAACCACGGCCAGTGCTGCTACATCACTGATTGCCTTCCTA
GGGCTCCACCATGATGTTCTGCAGAAAGTGAGGAAGGAGCTGCAATTAAAGGGGTTACTGTCTGGTCCCAACCAAGAAA
AACAATTGAACATGGAGTTCTTGGAGCAGCTGAAGTACACAGGCTGTGTTATCAAGGAAACCCTCAGGCTGAGCCCTCC
TGTTCCTGGAGGATTCCGAATTGCACTCAAGACCCTTGAGCTGAATGGTTACCAGATCCCCAAAGGCTGGAATGTTATT
TACAGTATCTGCGATACCCACGATGTGGCCGATCTCTTTACCGACAAGGACGAGTTCAACCCGGACCGCTTCATGTCTC
CGTCTCCGGAGGACTCCTCTAGGTTCAGTTTCATTCCTTTCGGTGGGGGCTTGAGGAGCTGCGTAGGCAAAGAGTTTGC
AAAAGTCCTTCTAAAAATATTTACGGTGGAGCTGGCGCGGAGCTGTGACTGGCAGCTGCTAAATGGACCTCCTACAATG
AAAACGGGCCCCATAGTGTACCCTGTGGACAATCTG
CitationRodriguez-Guzman m, Montero JA, Santesterban E, Gañan Y, Macias D, Hurle JM. Tendon-muscle crosstalk controls muscle bellies morphogenesis, which is mediated by cell death and retinoic acid signaling. Dev Biol. 2007 Feb 1;302(1):267-80.
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsThe authors said the probe was created by PCR using these primers: 5′-TACGGCTTCATCTACAAGACG-3′ and 5′-AATCTTGCAGGGAGATTGTCC-3 for retinoic acid hydrolase or cytochrome P450 family 26b type A1 (CYP26A1). The sequence here was extracted from NM_001001129.1 using these primer sequences.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-32
stage 32
Leg Mesenchyme
 

Entry 5

GEISHA IdCyp26A1.Blentic.2003Data SourcePublication
Complete cDNA Template Probeshow
ATGGGCTTCTCCGCTCTGGTCGCCAGCGCCCTGTGCACCTTCCTGCTGCCCCTGCTGCTCTTCCTGGCCGCCGTCCGGC
TCTGGGACCTGTACTGCGCCAGCGGCCGCGACCCCAGCTGTCCGCTGCCGTTGCCCCCGGGCACCATGGGGCTGCCCTT
CTTCGGGGAGACGCTGCAGATGGTGCTGCAGCGGCGGAAATTCCTGCAGATGAAGCGCAGGAAATACGGCTTCATCTAC
AAGACTCACCTCTTTGGGCGGCCCACTGTGCGGGTGATGGGCGCTGAGAATGTGCGGCACATCCTGCTGGGCGAGCACC
GCCTGGTCTCCGTGCAGTGGCCCGCCTCGGTGCGCACCATCTTGGGCTCGGGCTGCCTCTCCAACCTTCACAACGGGCA
GCACAAACACCGCAAAAAGGTGATCATGCAGGCCTTCTCCCGGGATGCCCTGCAGCACTACGTGCCTGTCATCCAAGAG
GAGGTGAGTGCCTGCCTGGCACAGTGGCTGGGTGCCGGGCCCTGCCTGCTGGTGTATCCCGAGGTGAAGCGCCTCATGT
TCCGCATCGCCATGCGCATCCTGCTGGGCTTCCAGCCCCGCCAGGCCAGCCCCGATGGTGAGCAGCAGCTGGTGGAGGC
CTTCGAGGAGATGATCCGCAACCTCTTCTCCCTCCCCATCGATGTGCCTTTCAGTGGGCTCTACCGGGGCCTGAGGGCG
CGCAACATCATCCATGCCAAGATTGAGGAGAACATCCGTGCCAAGATGGCCCGCAAGGAGCCCGAGGGTGGCTACAAGG
ATGCACTGCAGCTGTTGATGGAGCACACACAGGGTAATGGAGAGCAGCTCAACATGCAGGAGCTGAAGGAGTCTGCCAC
AGAGCTGCTCTTTGGAGGTCACGAAACCACGGCCAGTGCTGCTACATCACTGATTGCCTTCCTAGGGCTCCACCATGAT
GTTCTGCAGAAAGTGAGGAAGGAGCTGCAATTAAAGGGGTTACTGTCTGGTCCCAACCAAGAAAAACAATTGAACATGG
AGTTCTTGGAGCAGCTGAAGTACACAGGCTGTGTTATCAAGGAAACCCTCAGGCTGAGCCCTCCTGTTCCTGGAGGATT
CCGAATTGCACTCAAGACCCTTGAGCTGAATGGTTACCAGATCCCCAAAGGCTGGAATGTTATTTACAGTATCTGCGAT
ACCCACGATGTGGCCGATCTCTTTACCGACAAGGACGAGTTCAACCCGGACCGCTTCATGTCTCCGTCTCCGGAGGACT
CCTCTAGGTTCAGTTTCATTCCTTTCGGTGGGGGCTTGAGGAGCTGCGTAGGCAAAGAGTTTGCAAAAGTCCTTCTAAA
AATATTTACGGTGGAGCTGGCGCGGAGCTGTGACTGGCAGCTGCTAAATGGACCTCCTACAATGAAAACGGGCCCCATA
GTGTACCCTGTGGACAATCTGCCTGCCAAATTCATAGGTTTCAGCGGCCAAATCTGA
CitationBlentic A, Gale E, Maden M. Retinoic acid signalling centres in the avian embryo identified by sites of expression of synthesising and catabolising enzymes. Dev Dyn. 2003 May;227(1):114-27.
CopyrightCopyright © 2003 John Wiley & Sons, Inc. All Rights Reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_001001129).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
stage 1
stage 1
stage 3
stage 3
Epiblast
 
4-6
stage 4
stage 4
stage 6
stage 6
stage 6
Early Mesoderm
Epiblast
Hensen's Node
Neural Plate/Tube
Double Labeled
7-12
stage 8
stage 8
stage 8
stage 10
stage 10
stage 10
stage 10
stage 11
stage 11
stage 11
stage 11
Neural Plate/Tube
Splanchnic Mesoderm
Tail
double labeled
13-18
stage 14
stage 18
stage 18
stage 18
Early Endoderm
Endoderm
Lateral Plate Mesoderm
Leg Ectoderm
Lens
Pharyngeal Arches and Clefts
Spinal Cord
Tail
Wing Ectoderm
 

Entry 6

GEISHA IdCYP26A1.Bayha.2009Data SourcePublication
Complete cDNA Template Probeshow
ATGGGCTTCTCCGCTCTGGTCGCCAGCGCCCTGTGCACCTTCCTGCTGCCCCTGCTGCTCTTCCTGGCCGCCGTCCGGC
TCTGGGACCTGTACTGCGCCAGCGGCCGCGACCCCAGCTGTCCGCTGCCGTTGCCCCCGGGCACCATGGGGCTGCCCTT
CTTCGGGGAGACGCTGCAGATGGTGCTGCAGCGGCGGAAATTCCTGCAGATGAAGCGCAGGAAATACGGCTTCATCTAC
AAGACTCACCTCTTTGGGCGGCCCACTGTGCGGGTGATGGGCGCTGAGAATGTGCGGCACATCCTGCTGGGCGAGCACC
GCCTGGTCTCCGTGCAGTGGCCCGCCTCGGTGCGCACCATCTTGGGCTCGGGCTGCCTCTCCAACCTTCACAACGGGCA
GCACAAACACCGCAAAAAGGTGATCATGCAGGCCTTCTCCCGGGATGCCCTGCAGCACTACGTGCCTGTCATCCAAGAG
GAGGTGAGTGCCTGCCTGGCACAGTGGCTGGGTGCCGGGCCCTGCCTGCTGGTGTATCCCGAGGTGAAGCGCCTCATGT
TCCGCATCGCCATGCGCATCCTGCTGGGCTTCCAGCCCCGCCAGGCCAGCCCCGATGGTGAGCAGCAGCTGGTGGAGGC
CTTCGAGGAGATGATCCGCAACCTCTTCTCCCTCCCCATCGATGTGCCTTTCAGTGGGCTCTACCGGGGCCTGAGGGCG
CGCAACATCATCCATGCCAAGATTGAGGAGAACATCCGTGCCAAGATGGCCCGCAAGGAGCCCGAGGGTGGCTACAAGG
ATGCACTGCAGCTGTTGATGGAGCACACACAGGGTAATGGAGAGCAGCTCAACATGCAGGAGCTGAAGGAGTCTGCCAC
AGAGCTGCTCTTTGGAGGTCACGAAACCACGGCCAGTGCTGCTACATCACTGATTGCCTTCCTAGGGCTCCACCATGAT
GTTCTGCAGAAAGTGAGGAAGGAGCTGCAATTAAAGGGGTTACTGTCTGGTCCCAACCAAGAAAAACAATTGAACATGG
AGTTCTTGGAGCAGCTGAAGTACACAGGCTGTGTTATCAAGGAAACCCTCAGGCTGAGCCCTCCTGTTCCTGGAGGATT
CCGAATTGCACTCAAGACCCTTGAGCTGAATGGTTACCAGATCCCCAAAGGCTGGAATGTTATTTACAGTATCTGCGAT
ACCCACGATGTGGCCGATCTCTTTACCGACAAGGACGAGTTCAACCCGGACCGCTTCATGTCTCCGTCTCCGGAGGACT
CCTCTAGGTTCAGTTTCATTCCTTTCGGTGGGGGCTTGAGGAGCTGCGTAGGCAAAGAGTTTGCAAAAGTCCTTCTAAA
AATATTTACGGTGGAGCTGGCGCGGAGCTGTGACTGGCAGCTGCTAAATGGACCTCCTACAATGAAAACGGGCCCCATA
GTGTACCCTGTGGACAATCTGCCTGCCAAATTCATAGGTTTCAGCGGCCAAATCTGA
CitationBayha E, Jørgensen MC, Serup P, Grapin-Botton A. Retinoic acid signaling organizes endodermal organ specification along the entire antero-posterior axis. PLoS One. 2009 Jun 10;4(6):e5845.
Copyrighthttp://creativecommons.org/licenses/by/2.5/
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_001001129)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
stage 4
Epiblast
 
7-10
stage 10
stage 10
Endoderm
 

Entry 7

GEISHA IdCYP26A1.Tenin.2010Data SourcePublication
Complete cDNA Template Probeshow
GTGCCTCCCGGCGGCCGGCTCCGTGCCGCCGCGACGGGGCACGTCTCCGCCTGGGCGCTGCCGGTCCCCGAGGAGCGCG
GCGGTAAATCCGAGGGGGCGGCGGGTCCCGGCCGGCGGCGGCTCCCGCAGCACCTCGTCCGTCTGCCCGCCGGCCGTCT
GCGGCGGGCGGGATGCGCCGCGCAAAGCAAACGGTTAAAGATTTCGAGGGGAGGAGCCAGGCCGCAATCCGCAATTAAA
GATGAACTTTGGGTGAACTAATTTATCGGATGGTAAGGTAGGGTGGGCAGCAACCTGGGAAGGGTATAAAAGGCGGCCC
GCGGCGAGCCCGGCCCGCGCACTCGGAGCTCCCGGGGGGCCGGGCTGGACCGCACTCGCTGCCCCGCCGCCCCGCCATG
GGCTTCTCCGCTCTGGTCGCCAGCGCCCTGTGCACCTTCCTGCTGCCCCTGCTGCTCTTCCTGGCCGCCGTCCGGCTCT
GGGACCTGTACTGCGCCAGCGGCCGCGACCCCAGCTGTCCGCTGCCGTTGCCCCCGGGCACCATGGGGCTGCCCTTCTT
CGGGGAGACGCTGCAGATGGTGCTGCAGGTAAGGCGGGCAGCTCCTCCTCTCTCTGCAAGGGATGAAGCTGAGCGGGGC
TGTGCTGGGCTCCCGAGCCCAGGTGTGGATGAGCTCCTTCTTTTCCTTTATTTTTTTCCTTTTCTTTTTTTTTTTTTTC
CCCTATCTATTTATTTAAAACTTATTTATTTATTTTAAATTTACTTATCTCCCTTCCCTGTCCAGCGGCGGAAATTCCT
GCAGATGAAGCGCAGGAAATACGGCTTCATCTACAAGACTCACCTCTTTGGGCGGCCCACTGTGCGGGTGATGGGCGCT
GAGAATGTGCGGCACATCCTGCTGGGCGAGCACCGCCTGGTCTCCGTGCAGTGGCCCGCCTCGGTGCGCACCATCTTGG
GCTCGGGCTGCCTCTCCAACCTTCACAACGGGCAGCACAAACACCGCAAAAAGGTATGGCTCTGATGGTGGATGGAGAG
CGGGGCGGCTGTCCCGGGTGCAGTGACTGAGCCCGTGTCCTTTTCCTCTTCTCCTCCTTCTCCTCCTCATCCCCCGGGC
AGGTGATCATGCAGGCCTTCTCCCGGGACGCCCTGCAGCACTACGTGCCTGTCATCCAAGAGGAGGTGAGTGCCTGCCT
GGCACAGTGGCTGGGTGCCGGGCCCTGCCTGCTGGTGTATCCCGAGGTGAAGCGCCTCATGTTCCGCATCGCCATGCGC
ATCCTGCTGGGCTTCCAGCCCCGCCAGGCCAGCCCTGATGGTGAGCAGCAGCTGGTGGAGGCCTTCGAGGAGATGATCC
GCAACCTCTTCTCCCTCCCCATCGATGTGCCTTTCAGTGGGCTCTACCGGGTGAGGCTCCAGGCCAGCTAGGGAAGCTC
CCAGGGCAGCAGGGAGGGACGGTGGTGTGGTTTAAGTCAGCAGTGTGGCGTAAGTCGGTGGTGTGGCACAAGTCTCAGT
TCACTCTCCTCCTGCTTGCACAGGGCCTGAGGGCGCGCAACATCATCCATGCCAAGATTGAGGAGAACATCCGTGCCAA
GATGGCCCGCAAGGAGCCCGAGGGTGGCTACAAGGATGCACTGCAGCTGCTGATGGAGCACACACAGGGTAATGGAGAG
CAGCTCAACATGCAGGTGAGGTTCCCCTCATCCAGATCCATCTCTTTCCACCCTGCTTCCCTCCCTCAGTCTGCAGCAT
GTTTATCTTCAGGACTAAAAATGGAGAGCAGGAGGTGCTGTCCCTTTGCCAGGTCATAAAGCAGCCTGTGCAGTGCATG
AGAGTTCTGGGGGCAGAGGATGTAGCCAGGCTGCTGGATGAGGGGTAGAGGGTTGTACCTGTGGGGACCACCACCCACT
CTGGCTCCTGGGTGCCCACTCCAGCCTGAAATCACCATGTGGCATTGGAGGTGGAGTGGGTTCAGTGGGGATACCTCAC
TCAAGGCATATTTTCTCTTTCTGTCCTGTGTGTAAGGAGCTGAAGGAGTCTGCCACAGAGCTGCTGTTTGGAGGTCATG
AAACCACTGCCAGTGCTGCTACATCACTGATTGCCTTCCTAGGGCTCCACCATGATGTTCTGCAGAAAGTGAGGAAGGA
GCTGCAAGTAAAGGTGTGTGTCTTTCCCACAACCACTTCCCAGGAGCAGGCAATAGGAAGGTCCCTCAGAGAGGTGTCC
CAGTATGGGTTCCCCTTGACAAAGGAGGTTCCCTACTTACAGGGTGGCAGGGAAACATCGTTAGCTGAGGGACAGCTGT
CTTGCAGTGGCTGAAGCCTGTTCCATAAATGTCATGGCAGTATCTTCCTACCTAGGGGTTACTGTCTGGTCCCAACCAA
GAGAAGCAATTGGACATGGAGGTCTTGGAGCAGCTGAAGTACACAGGCTGTGTTATCAAGGAAACCCTCAGGCTGAGCC
CTCCCGTTCCTGGAGGATTCCGAATTGCACTCAAGACCCTTGAGCTGAATGTAAGTAGGGCTGGGGTTCAGCTCCTCAG
AGCACTGCCAATTGTGAATGTTGTTGTGTAGGTACCTGCCTTATTGAGCCGGGGGAACTGGAGGGTACATCTGTATGTC
ACATGCTGACGCTTCAGCTTCCTTAATACAACAAGGTGCTTCATGTCTCCTCTCTTCTTTTCGTAGGGTTACCAGATCC
CCAAAGGCTGGAATGTTATTTACAGTATCTGCGATACCCACGATGTGGCCGATCTCTTTACCGACAAGGACGAGTTCAA
CCCGGACCGCTTCATGTCTCCGTCTCCGGAGGACTCCTCTAGGTTCAGTTTCATTCCTTTCGGTGGGGGCTTGAGGAGC
TGCGTAGGCAAAGAGTTTGCAAAAGTCCTTCTAAAAATATTTACGGTGGAGCTGGCGCGGAGCTGTGACTGGCAGCTGT
TAAATGGACCTCCTACAATGAAAACGGGCCCCATAGTGTACCCTGTGGACAATCTGCCTGCCAAATTCATAGGTTTCAG
CGGCCAAATCTGAGTGCTCAACGCTTGCCTCAGGCTGGATTTCTGTATAACATCTCATATGTACATAGTAACTTTTTAT
AGTAACGAAGGCCTTTAAATATTTAAACTTGTAAATGTACAGTAGTTATTTATGTCTAAGTATTTCAAAAGGCTGTGAC
ATTTTTCCCCAAGCACTACAATTATGGGTCGTCGATTCATAATTAGATAATTTTATTTCTATAGAAATAAGTTTTCCCC
TATTTAAAAATCTTACTACAAGCTGGCCAGATACATGTTTGACAAGACATTTCACCATGGTGTATGCATTCAGAAATAT
TCTCAAAGGCATTTGAAACAATGGCAACTAGCTCTCATCCAAATTATCTAAATCGTTATGGTTTGAGGTTTTCAGTATT
ATTTGTGTCTAG
CitationTenin G, Wright D, Ferjentsik Z, Bone R, McGrew MJ, Maroto M. The chick somitogenesis oscillator is arrested before all paraxial mesoderm is segmented into somites. BMC Dev Biol. 2010 Feb 25;10:24.
Copyrightauthors retain copyright of their article, and grant any third party the right to use reproduce and disseminate the article, subject to the terms of BMC Developmental Biology copyright and license agreement
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NC_006093.3
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 20
stage 21
stage 22
stage 23
stage 24
Tail
 

Entry 8

GEISHA IdCYP26A1.Wilson.2007Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
ATGGGCTTCTCCGCTCTGGTCGCCAGCGCCCTGTGCACCTTCCTGCTGCCCCTGCTGCTCTTCCTGGCCGCCGTCCGGC
TCTGGGACCTGTACTGCGCCAGCGGCCGCGACCCCAGCTGTCCGCTGCCGTTGCCCCCGGGCACCATGGGGCTGCCCTT
CTTCGGGGAGACGCTGCAGATGGTGCTGCAGCGGCGGAAATTCCTGCAGATGAAGCGCAGGAAATACGGCTTCATCTAC
AAGACTCACCTCTTTGGGCGGCCCACTGTGCGGGTGATGGGCGCTGAGAATGTGCGGCACATCCTGCTGGGCGAGCACC
GCCTGGTCTCCGTGCAGTGGCCCGCCTCGGTGCGCACCATCTTGGGCTCGGGCTGCCTCTCCAACCTTCACAACGGGCA
GCACAAACACCGCAAAAAGGTGATCATGCAGGCCTTCTCCCGGGATGCCCTGCAGCACTACGTGCCTGTCATCCAAGAG
GAGGTGAGTGCCTGCCTGGCACAGTGGCTGGGTGCCGGGCCCTGCCTGCTGGTGTATCCCGAGGTGAAGCGCCTCATGT
TCCGCATCGCCATGCGCATCCTGCTGGGCTTCCAGCCCCGCCAGGCCAGCCCCGATGGTGAGCAGCAGCTGGTGGAGGC
CTTCGAGGAGATGATCCGCAACCTCTTCTCCCTCCCCATCGATGTGCCTTTCAGTGGGCTCTACCGGGGCCTGAGGGCG
CGCAACATCATCCATGCCAAGATTGAGGAGAACATCCGTGCCAAGATGGCCCGCAAGGAGCCCGAGGGTGGCTACAAGG
ATGCACTGCAGCTGTTGATGGAGCACACACAGGGTAATGGAGAGCAGCTCAACATGCAGGAGCTGAAGGAGTCTGCCAC
AGAGCTGCTCTTTGGAGGTCACGAAACCACGGCCAGTGCTGCTACATCACTGATTGCCTTCCTAGGGCTCCACCATGAT
GTTCTGCAGAAAGTGAGGAAGGAGCTGCAATTAAAGGGGTTACTGTCTGGTCCCAACCAAGAAAAACAATTGAACATGG
AGTTCTTGGAGCAGCTGAAGTACACAGGCTGTGTTATCAAGGAAACCCTCAGGCTGAGCCCTCCTGTTCCTGGAGGATT
CCGAATTGCACTCAAGACCCTTGAGCTGAATGGTTACCAGATCCCCAAAGGCTGGAATGTTATTTACAGTATCTGCGAT
ACCCACGATGTGGCCGATCTCTTTACCGACAAGGACGAGTTCAACCCGGACCGCTTCATGTCTCCGTCTCCGGAGGACT
CCTCTAGGTTCAGTTTCATTCCTTTCGGTGGGGGCTTGAGGAGCTGCGTAGGCAAAGAGTTTGCAAAAGTCCTTCTAAA
AATATTTACGGTGGAGCTGGCGCGGAGCTGTGACTGGCAGCTGCTAAATGGACCTCCTACAATGAAAACGGGCCCCATA
GTGTACCCTGTGGACAATCTGCCTGCCAAATTCATAGGTTTCAGCGGCCAAATCTGA
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_001001129
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 21
Hindbrain
Rhombomeres
 
25-30
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 29
Hindbrain
Midbrain
 
31-34
stage 34
stage 34
Midbrain
 

Entry 9

GEISHA IdCYP26A1.Reijntjes.2010Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GCCTCTCCAACCTTCACAACGGGCAGCACAAACACCGCAAAAAGGTGATCATGCAGGCCTTCTCCCGGGATGCCCTGCA
GCACTACGTGCCTGTCATCCAAGAGGAGGTGAGTGCCTGCCTGGCACAGTGGCTGGGTGCCGGGCCCTGCCTGCTGGTG
TATCCCGAGGTGAAGCGCCTCATGTTCCGCATCGCCATGCGCATCCTGCTGGGCTTCCAGCCCCGCCAGGCCAGCCCCG
ATGGTGAGCAGCAGCTGGTGGAGGCCTTCGAGGAGATGATCCGCAACCTCTTCTCCCTCCCCATCGATGTGCCTTTCAG
TGGGCTCTACCGGGGCCTGAGGGCGCGCAACATCATCCATGCCAAGATTGAGGAGAACATCCGTGCCAAGATGGCCCGC
AAGGAGCCCGAGGGTGGCTACAAGGATGCACTGCAGCTGTTGATGGAGCACACACAGGGTAATGGAGAGCAGCTCAACA
TGCAGGAGCTGAAGGAGTCTGCCAC
CitationReijntjes S, Francis-West P, Mankoo BS. Retinoic acid is both necessary for and inhibits myogenic commitment and differentiation in the chick limb. Int J Dev Biol. 2010;54(1):125-34
Copyright© 2009 UBC Press
CommentsThe complete cDNA template sequence was obtained from the information provided in the publication as described in Reijntjes et al. 2010.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 25
Wing AER
C. Untreated/Control embryo: Shows the normal expression of Cyp26A1.
31-44
stage 44
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.331

Mouse

EmageMGI:1096359
EurexpressMGI:1096359
MGI GXDMGI:1096359

Frog

Xenbase855582

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-990415-44
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