GEISHA - A Chicken Embryo Gene Expression Database
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FGD5
FYVE, RhoGEF and PH domain containing 5

Gene
Official SymbolFGD5
Official Full NameFYVE, RhoGEF and PH domain containing 5
CGNC ID6483
also known asFYVE, RhoGEF and PH domain-containing protein 5, FYVE, RhoGEF and PH domain-containing protein 5, Zinc finger FYVE domain-containing protein 23
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_414463
PolypeptideXP_414463
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.12994
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human152273ENSG00000154783MIM:614788
Mouse232237ENSMUSG00000034037MGI:2443369
Xenopus100496480961643
Zebrafish100151562ENSDARG00000070653ZDB-GENE-090428-3, ZDB-GENE-130925-3ZFIN:ZDB-GENE-090428-3, ZFIN:ZDB-GENE-130925-3
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene416130
Ensembl Gene
KEGGgga:416130

Entry 1

GEISHA IdChEST114g22Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
CCGGTCTCTGTGATACCTGCAGAGGTCATCACATCTGATGAGGAACAGAGGAGTTCAGAAGATGAGAAGAGCAGTCAAG
GTGATCCCAGCCTCATCAACAAGAAAGAAGGCCAACCCAGAGCTTCCCTCATTGCCCAGGAGCTGATGTGTTCAGAAAA
AGCATACGTAGAGATGCTCCAGCTGTTACGTATGGATTTATATGAAGGTATCTTGAAAGCACTTGGAGAAGAAGATGAA
CAGGAAGTAGTTGAACTCAAGCAGGGCTTAAGTGAGCTCCCTGAAATGTATGAATTGCACCAAGAGATCCTGGGAGAAC
TGGAAGAAAGAGTCCTTAAATGGGAGGAACACCAGAAAGTTGCTGATGTTTTTCTCTCCAGAAAATCAAGACTGAATCA
CCACACAGCATACATTACACAGTTTGACAAGAATTTGGCTCTGCTAGATGAAACTTGCCTTAAATATTCCCAGCTGGCT
ACTGTCATTCAGGAGTTTGAGAAGAGCTCTGGTGGAAGCCCACAGAATGTGAAACACCAGCTTTTGAAAGTGGTGCAGC
GTGTCTTCCAGTATCGTGTGATGCTCACAGATTACTTGAATAATCTTTGCCCTGATTCTACAGAGTATGAAGCCACACA
AGCTGCCTTATTCATTGTTTCTGAAATCGCGGATCGAGCCAATGAGAGCATGCTCCAAGGGGAAAACTTGCAGAAGCTG
GTACACATTGAGCATAGTGTGAGAGGGCAAAGCGGCCTCCTCCAGCCAGGAAGGATCTTTGTGAAAGAGGGAACGCTGA
TGAAAGTCTCTGGAAAAAACAGGCACCCTCGGCACTTGTTCTTGATGAATGATGTTCTGCTGTACACATATCCCCAGAA
AGATGGGCAATACCAAC
CommentsNo specific expression detected for stages 11-20.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-22
stage 22
Limb Buds
Somatopleure
 

Entry 2

GEISHA IdFGD5.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTGGTAAGAGAAAAGGAACGCCC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGACACGATACTGGAAGACACGCTGcDNA Template Length951
Forward cDNA Template Probeshow
CACCTTTCAAAGCTGGTGTTTCACATTCTGTGGGCTTCCACCAGCAGCTCTTCTCAAACTCCTGAATGACAGTAGCCAG
CTGGGAATATTTAAGGCAAGTTTCATCTAGCAGAGCCAAATTCTTGTCAAACTGTGTAATGTATGCTGTGTGGTGATTC
AGTCTTGATTTTCTGGAGAGAAAAACATCAGCAACTTTCTGGTGTTCCTCCCATTTAAGGACTCTTTCTTCCAGTTCTC
CCAGGATCTCTTGGTGCAATTCATACATTTCAGGGAGCTCACTTAAGCCCTGCTTGAGTTCAACTACTTCCTGTTCATC
TTCTTCTCCAAGTGCTTTCAAGATACCTTCATATAAATCCATACGTAACAGCTGGAGCATCTCTACGTATGCTTTTTCT
GAAGACATCAGCTCCTGGGCAATGAGGGAAGCTCTGGGTTGGCCTTCTTTCTTGTTGATGAGGCTGGGATCACCTTGAC
TGCTCTTCTCATCTTCTGAACTCCTCTGTTCCTCATCANATGTGATGACCTCTGCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Blood Islands
Epiblast
Primitive Streak
 
7-12
stage 8
stage 8
stage 9
stage 10
stage 10
stage 11
stage 11
Anterior/Second Heart Field
Blood
Blood Islands
Blood Vessels
Endocardium
Extraembryonic Blood Vessels
Extraembryonic Mesoderm
Forebrain
Heart
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Primitive Streak
Dorsal view.
Ventral view.
ventral; why dos Terry have second heart?
13-18
stage 13
stage 13
stage 14
stage 14
stage 14
stage 14
stage 14
Anterior/Second Heart Field
Blood Islands
Blood Vessels
Endocardium
Extraembryonic Blood Vessels
Heart
Neural Plate/Tube
Dorsal view.
Ventral view.
19-24
stage 23
Allantois
Blood Vessels
Endoderm
Eye
Heart
Neural Plate/Tube
Pharyngeal Arches and Clefts
 
25
stage 25
Widespread Expression
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.12994

Mouse

EmageMGI:2443369
EurexpressMGI:2443369
MGI GXDMGI:2443369

Frog

Xenbase961643

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-090428-3, ZDB-GENE-130925-3
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