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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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AFDN
afadin, adherens junction formation factor

Gene

Official Symbol	AFDN
Official Full Name	afadin, adherens junction formation factor
BirdBase ID	BB-GG14508
CGNC ID	51504
also known as	MLLT4, afadin\|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4\|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 4
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_419605
Polypeptide	XP_419605
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.54416

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	40620			FBgn0259212
Human	4301	ENSG00000130396		MIM:159559
Mouse	17356	ENSMUSG00000068036	All phenotypic alleles (5):Targeted, knock-out(2) Targeted, other(3)	MGI:1314653
Xenopus	100493083, 496308			948332
Zebrafish	558359	ENSDARG00000029472	ZDB-GENE-050419-52, ZDB-GENE-130530-932	ZFIN:ZDB-GENE-050419-52, ZFIN:ZDB-GENE-130530-932

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	421564
Ensembl Gene
KEGG	gga:421564

GEISHA Id	ChEST127p23	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show GCCAGACATGCGCTTGTTGTCATCCCCTAAATACTCGCTCTATGAGGTGCATGTCAGTGGAGAAGAAAGAAGATTAGAT GTGGATGAGAAGCCTCTTGTTGTACAATTAAACTGGAACAAAGATGATCGAGAAGGAAGGTTTGTTCTCAAGAATGAAA ATGATACGCTTCCTCCAAAGAAGGCTCAGAGTAATGGCCCTGAAAAACAAGAAAAAGAAGGAGTAATACAGAATTTCAA ACGAACTCTCTCAAAGAAAGAAAAGAAAGAGAAGAAGAGGCGTGAAAAAGAGGCATTGCGACAAGCATCAGATAAAGAT GATCGACTTCTTCATGGGGATGATATTGAGAATTCTCGCCTTGCAGCTGAGGTTTACAAAGATATGCCTGAGACCAGCT TCACTCGCACAATATCTAATCCTGAGGTGGTTATGAAACGACGGCGGCAGCAAAAACTAGAGAAGAGAATGCAGGAATT TCGCAGTTCTGATGGCAGACCAGACTCAGGTGGGACGCTGAGAATTTATGCGGACAGTTTAAAACCAAATATACCATAC AAGACAATCCTGTTGTCAACTACAGATACTGCAGACTTTGCAGTTAGTGAAGCACTGGAGAAATACGGCTTGGAGAAGG AAAACCCCAAGGATTATTGTATTGCTCGTGTCATTCTGCCTCCTGGTGCTCAGCACTCTGATGATAAAGGTGCTAAAGA AACTATTCTAGATGATGATGAGTGTCCACTTCAGATATTCAGGGAATGGCCTAGTGATAAAGGAATACTAGTCTTTCAG TTTGAAAGGCGGCCTCCTGATTATGTCCCAAAGAAATCCAAGAAAAAGCTGATGGAAAGCCTTTAAGGGGAAAGAAAAA TTGACGGGCTGGCTTCGGCTCTTGCCTTCTTCTGAAAAACTACCAAC

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 10

stage 12

stage 12

Endoderm
Intermediate Mesoderm
Lateral Plate Mesoderm
Notochord
Sinus Venosus
Surface Ectoderm

13-18

stage 17

stage 17

stage 18

Amnion
Proepicardium

19-23

stage 20

stage 22

stage 23

Allantois
Amnion
Surface Ectoderm

Data from NCBI Unigene EST Profile
Unigene ID: Gga.54416

Mouse

Emage	MGI:1314653
Eurexpress	MGI:1314653
MGI GXD	MGI:1314653

Frog

Xenbase

Fruit Fly

BDGP	FBgn0259212

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-050419-52, ZDB-GENE-130530-932

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