GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

IRF8
interferon regulatory factor 8

Gene
Official SymbolIRF8
Official Full Nameinterferon regulatory factor 8
CGNC ID49782
also known asICSBP, interferon regulatory factor 8|IRF-8|interferon consensus sequence binding protein, Interferon regulatory factor 8, IRF-8, ICSBP, Interferon consensus sequence binding protein
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_205416
PolypeptideNP_990747
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human3394ENSG00000140968MIM:601565
Mouse15900ENSMUSG00000041515All phenotypic alleles (6):Spontaneous(1) Chemically induced(1) Targeted, knock-out(1) Targeted, other(3) MGI:96395
Xenopus100496217, 446986985945
Zebrafish436895ENSDARG00000056407ZDB-GENE-040718-367ZFIN:ZDB-GENE-040718-367
Gene Ontology
Molecular Functionregulatory region DNA binding, sequence-specific DNA binding transcription factor activity
Biological Processcellular response to lipopolysaccharide, defense response to bacterium, defense response to protozoan, more...immune response, myeloid cell differentiation, negative regulation of growth of symbiont in host, phagocytosis, positive regulation of interferon-gamma production, positive regulation of interleukin-12 production, positive regulation of transcription initiation from RNA polymerase II promoter, transcription, DNA-templated
Cellular Componentnucleus
Links to other databases
Entrez Gene396385
Ensembl GeneENSGALG00000005757
KEGGgga:396385

Entry 1

GEISHA IdO05Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GGGTGGACGCTTCCATTTTCAAGGCTTGGGCTGTTTTCAAAGGCAAATTCAAAGAAGGTGACAAAGCAGAGCCGGCCAC
CTGGAAGACACGGCTGCGCTGTGCCTTGAACAAGAGCCCTGACTTTGAGGAGGTGACAGACAGATCCCAGCTGGACATC
TCTGAGCCCTACAAGGTGTACAGGATCGTGCCAGAGGAGGAGCAGAAATGCAAAATCGGTGTTGGGAACGGGAGCAGCC
TGACTGACGTTGGAGACATGGACTGCAGCCCCTCTGCCATCGATGACCTGATGAAGGAGCCTCCTTGTGTGGATGAATA
CCTGGGGATCATCAAGAGAAGCCCCTCACCTCCACAGGAGACCTGCAGAAACCCCCCAATACCAGACTGGTGGATGCAG
CAGCCCAGCCCCTCTTTGCCCCTGGTGAATGGGTACACTGGCTATGAGCAGCATCATTCGGGCTACTCCCAGATGGTGA
TCACCTTCTTCTACAGCGGGAGGCTGGTGGGGCACATCACCACCTCGTATCCTGAGGGCTGCAGGCTGTCCCTCAGCCA
ACCCTCTAACCACGGTGAGAAGCTCTACACCCCTGACAGCCTGGAGCACGTGAGGTTCCCCTCAGCCGAAGCCATCCAG
AATGACCGTCAGAAGCAGATCACCAAGAAGCTCTTTGGGCACCTAGAGAGGGGCGTCCTGCTGCACAGCAACAAGCAGG
GCATCTTCATCAAGAGGCTGTGTCAAGGAAAGGTCTTCTGGAGTGGGAACACGGTGGTGTACAAGGACAG
Commentsno specific expression detected stages 3-24, low level ubiquitous.
no images

Entry 2

GEISHA IdChEST466d19Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GGGGAAGGGTCTTCTGGAGTGGGAACACGGTGGTGTACAAGGACAGGCCAAGCAAACTGGACCGGGATGAGGTGGTGAA
GATATTCGACACCAACTTGTTCTTTAGAGAGCTGCAGCAGTACTACAACAACCAGGGCCGCTTCCCAGACAGCAGGGTC
ATGTTGTGCTTTGGAGAGGAGTTCCCAGACACGGTGCCACTGCGGTGTAAGCTCATCCTTGTCCAGGTGGAGCAGCTGT
GCGTCAGGCAGGTGATGGAGGAGGCCGGCAAGACCTGCAGCAGCCCCATGCTGCCTGATGACGTGCAGCAGGAGCAGGT
GTACAGGATCTTCCAGGACATCTGTGGGCCGCACCAACGGCCGCTGTTCAGAGAGAACCAGCAGATCGCCGTGTGAGCC
TCCGTGGGCACAGCGTGGGGTCTGGGTGACTCCAGACCAGTTGGGATCCATTAGTGCCTAAAAATTCCCCTTTGTTTGG
CGAGTTGGTTCTTGATCTTAGCTGTCTCCAGTCCAAAAATCTGTGTAAGCACAGCGGTCCAAAGTAACAGCCCCTTTTG
GTCTGAGAACCGCCATTGGAAGGAGGTGGCGACTCCTGGAAAGGCCTTACAGTGCTCAAATGCAGCAAATCCTTAGCAG
AAGTAATTCTTTTTCTTTTTTCCCCCAAAGAATTTGCAATCCTGCTGAAGTCTGTGGTATGCCTTCCATGGGGGAAAAA
AACCTCCTCGAGGCCCTCTTTATTTTTGCAGTGAGGTTTATATTTTTGTCTGTCATATTGGAAGTATTTTGAAATTCAG
AGAGGGATGCAGAAATTCTGTATGTAAATGTTGACTATGAGAACGTAGGGATCTTAACTTTTCCCACCCCAAACAGAGT
TTATATAAACAG
CommentsNo specific expression detected stages 10-20.
no images

Mouse

EmageMGI:96395
MGI GXDMGI:96395

Frog

Xenbase985945

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040718-367
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona