GEISHA - A Chicken Embryo Gene Expression Database
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CHAMP1
chromosome alignment maintaining phosphoprotein 1

Gene
Official SymbolCHAMP1
Official Full Namechromosome alignment maintaining phosphoprotein 1
CGNC ID50841
also known asZNF828, chromosome alignment maintaining phosphoprotein 1|chromosome alignment-maintaining phosphoprotein 1|zinc finger protein 828
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_416932
PolypeptideXP_416932
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.49209
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human283489ENSG00000198824MIM:616327
Mouse101994ENSMUSG00000047710All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:1196398
Xenopus100380176, 1000369481016149
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene418733
Ensembl Gene
KEGGgga:418733

Entry 1

GEISHA Idpgn1c.pk011.b12Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
CTCCAGATCCAGAGAAATTAGTTTCAGCTGTGTCCTCAGACTCAGAAAAATCATCCCCTGATGCGTCCCCCGACCCCCA
GAAGCAATCCCCTGATGCATCCCCAGACCCACAGAAGCCAGCCCCTGCTGTGTCCCCAGACCCACAGAAGCCAGCCGTG
GCTGTGTCTCCAGAGCCCCGTCGCCATTCCCCTGCTGTATCACCAGAGCCCCGTCGCCATTCCCCAGCAATGTCTCCAG
AGCCCCGTCGTCATTCCCCTGCTGTATCACCTGAGCCCCGTCGCCATTCTCCAGCCGTGTCTCCAGAGCCCCGTAGATA
CTCTCCGGGTGTGTCACCAGAGCCAAAGAAACCTACTCCAGCTGTATCCCCTGAACCACGAAGGTATTCCCCAGCTGTG
TCTCCAGAGCCTCGGAGGCATGCTTCTCAAATGCGTAGGCCTGCTTCTGCTGCTTCTCCTGAAATCCGGAGGCCTGCTC
CTGCAGTTTCGCCAGAGTCATGGAGACCTGGTCCTACCGTTTCCCCTGAACCCTGGAGATCTACGCCTCATGAAATGCA
AAAGTCTTCCACAGTTTCTCCCTGGGCTTCAAAGGCTTCCATAGAGTCTCGGAGGTCTGCCCCCGAGTCACGAAGGTCT
GGCCCAGTTGCATCACCAGAGTCTAGGAGGCTTGTATCTGACTCATGGAAATCGACGTCCTTTTCTGAATCCCAGAAGT
CCACTCTTGTTTCTACTGAGCCATGGAAACCCATCTCATCTGTTTACCCAGAAGGCTGGAAACCTGTTCTGTCCCCTGA
CACGTGGAAGCATTCTTCCTCTGTTTCTTCTGAGCTTCNCAATCTAGTCATGCTGTTTCCTCTGAC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
Unlabeled
 
7-12
stage 9
Midbrain
Neural Plate/Tube
 
19-24
stage 19
stage 20
stage 21
Hindbrain
Lateral Plate Mesoderm
Leg Mesenchyme
Limb Buds
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Spinal Cord
Surface Ectoderm
Wing Mesenchyme
Surface label could be in superficial mesoderm, not AER
25-26
stage 26
Limb Buds
Midbrain
Paraxial Mesoderm
Spinal Cord
 

Entry 2

GEISHA IdChEST663a9Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GAGGAACTCTGAAGCTTGCTCTTTATAAGGTGAAGTGCTGTGAAGACGACTATCGTAGAAAAATGGACATGTTGCAGAT
ACTGCGTAAAACCACAGAACGCTTGGAATGTGATCACTGCAGCTTCAGAGGAACGGACTATGAGAACATACAAATTCAC
ATGGGCACCATACACCCAGAGTATTGTGATGAAATGGATGCTGCTGGTTTGGGTAAACTTATCTTTTATCAGAAAAGTG
CAAAACTGTTTCACTGCCACAAATGTTTCTTTACCAGCAAGATGTATTGCAACGTGTATTATCACATCACAGCACAACA
TGCAGCACCAGAGAAATGGAACGAGGAGCGGAAAGGACAGGTAGAAGGAGGTTCAGATTCCTCCAAAAAGAATGGTGCT
GCGGAGCCCCAGAAATGTACCCCTCCCCCTGAGTCTCTCAAACCTGCCCTTTCTCCTGAAGTCCCCAAACCTGAATCCA
AGCTTCAGAAATCGTCAGTGTCCCCAGAGTCCCAGAAGTCAGCTCAGACTTCTTCCTCTGAGCCGGAGAGGTCAGCCCA
GATCATGTCCCCAGATTCAGAAAAGTCAGTTCAGGCTGTGTCTCCAGATCCAGAGAAATTAGTTTCAGCTGTGTCCTCA
GACTCAGAAAAATCATCCCCTGATGCGTCCCCCGACCCCCAGAAGCAATCCCCTGATGCATCCCCAGACCCACAGAAGC
CAGCCCCTGCTGTGTCCCCAGACCCACAGAAGCCAGCCGTGGCTGTGTCTCCAGAGCCCCGTAGATACTCCCCGGGTGT
GTCACCAGAGCCAAAGAAACCTACTCCAGCTGTATCCCCTGAACACGAAAGTATTCCCCAGCTGTGTCTCCAGAGCCTC
GGAGGCATGCTTCTCAAATGCNGTAGCCTGCTTCTGCTTCTTCTCTTGAAATCCGGAGGCCT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
Epiblast
 
13-18
stage 16
stage 17
Head Mesenchyme
Limb Buds
Midbrain
Pharyngeal Arches and Clefts
 
19-22
stage 21
stage 22
Face Mesenchyme
Midbrain
Paraxial Mesoderm
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.49209

Mouse

EmageMGI:1196398
EurexpressMGI:1196398
MGI GXDMGI:1196398

Frog

Xenbase1016149

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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