GEISHA - A Chicken Embryo Gene Expression Database
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HDAC10
histone deacetylase 10

Gene
Official SymbolHDAC10
Official Full Namehistone deacetylase 10
CGNC ID50586
also known ashistone deacetylase 10, HDAC10
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_415986
PolypeptideXP_415986
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.27678
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human83933ENSG00000100429MIM:608544
Mouse170787ENSMUSG00000062906All phenotypic alleles (1):Targeted, knock-out(1) MGI:2158340
Xenopus100497245, 7344025857297
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene417742
Ensembl Gene
KEGGgga:417742

Entry 1

GEISHA IdChEST928i15Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GTCCGAGCTCTCTCACATACCTCTCAGCCTGGGGTGAGTACCCCTACGCGCTTGCTGGCCCAGGGTTCGCCCCGGCCTG
GCCTCAGGGCCCTTATCCGCGGCCGCAGGGACTGGGGGAGCTCCTGTACCCCCTCTTCTGCACCGCACGTCCCTCGGGT
CCCGCTGAGGTCTGGAGCGTTCAGAAAAGTGCGAGATCCTCCTGCAGGCTGACGCCCTGCATACATACGTTCTCACTGG
CTGTTTTATTGTACGTCTGCTCCGTACCTGAGATACGCACCGAGGGACTCCTGCTTTGTTCTGTCTGTAGCGATGGCTT
CAGGAACAGCCCTGATTTACGACGAGGCAATGACCAGGCATAAGCTGCTTTGGAATGATCCTATTTGTGATATTGAAGT
GCCAGAAAGACTGTCAGCCTCCTATGAGCAGCTTCAGTGTTACCATCTCGTGGAAAGATGTGTCCCTGTGCCTGCGAGA
GAAGGAAGCGAGGAGGAAATCCTCTTAGTTCACAGTTCAGAACACTTGGAGGCTGCAAAAAGCACACAGACAATGAATG
AAGAGGAACTGAAAAGAATCTCTGGGAATTATGATTCTTTTTTCTTTCATCCGAACACTTACCACTGTGCCAGGCTAGC
TGTAGGAGCAGCTTTGCAACTAGTGGACTCTGTGATGTCAGGAAAAGTATGCAATGGAATGGCATTAGTAAGACCTCCA
GGTCACCACAGTCAGAGAAACGCAGCCAATGGGTTCTGTTTGTTCAACAACGTCGCTATTGCAGCAGAATATGCCAAAC
TGAAATATGGTCTACAGAGAATCCTAATTGTTGACTGGGATGTGCACCATGGGCAAGGAACTCAATATATATTTGAAGA
AGATCAAAGTGTTTTGTATTTTTCCTGGCATCGCTATGAGCATCAGGAATTCTGGCCATCGCTCAAAGAATCTGAATAT
GATGCTGTGGGTTTGGG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
stage 12
Extraembryonic
Tail
 
13-18
stage 16
stage 16
Extraembryonic
Tail
 
19
stage 19
Extraembryonic
Widespread Expression
 

Entry 2

GEISHA IdHDAC10.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATAGAGCAGCACATAAACCCTATTGG
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGGCATTGAAGCATTTTCCAGTCCcDNA Template Length1024
Complete cDNA Template Probeshow
TTTTAAAAAAGCTGGGCGCAGAATTAGAGCAGCACATAACCCTATGGAAATGGTGACATATGAAGACACATCATTTTTG
CACAATTTGAGCACCAGATCAGACTTACCAAAGACTGCTGATACAAATCCCCTGTGCAGATGATGAAGCTAAGATAACG
GACAGCAACGAAACTGACAAAATAGAAAGATTTTTGGAATTGCACATGAAAAATGTTATATTTCCAGTTCCTCCCATCA
GAACAGCAACAACAGCTGAGTTGAAAGCTTCAGCGCACCTGAACACCTTCCCAGTACACCTTCATGTTGTGAAGGAAAT
GGACAAAAATGAAATAGAAGCTCTTGTCAGTGATTTTCATGCAGACCTTGTGAAAACAAACAAAACTTTGCTCTCTCTG
CGCAGTACATTGACCATCCTAGATAAAATACTTAAGAAAGAGGTGTGCAATGGAATTGCAGAATCACCTGCAGCTTCTG
CTTCTGTTGCTGTTGCACTGAGACATCCTCTTTGTTTTGGGCTTCAAAGAGTGCTTTGCATCTTTGTTGGAGACATGCA
TATCATTCCGAACACGGAAGATGGAAAAATACTTGTCATACATATTTGCAAGGAAGAACAGACTGGAAAGAGCAGCTCT
AAACACTATATTGTGCTAAACTGGAAAGAGGATGCTGACGGGAATGACTTCTTTTCTGCTGTACTTGGATTCATTCTTC
CTGTAGCATACAGTTACCAACCCAACTTGATAGTAATAGCTGTTGGACCAAACAGGAGCCTTGGAATAAGTGGGATTTC
ACTTCTTTTTGGTTTGCTACAAGGCCTAGCAGAATCTCGAATTCTTGCAGTGATTGAGGATACAGACATAAATCTAATG
CAAAGTGTAGCCAAAACACTTGCAGGTGCTTCTGTGCCCCCTTTGGAGTTCACGTGCCTCCTACCCAAGAAAAAGTAAA
TCAAATAAAAATGTTAAGGAACCTCAGCGGACTGGAAATGCTTCAATGCCTTAGGGGGTAATTTTCAGAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Area Pellucida
Germinal Crescent
Head Process
Lateral Plate Mesoderm
Primitive Streak
Low level expression.
Sections pending.
7-12
stage 7
stage 8
stage 9
stage 10
stage 11
stage 12
Anterior Intestinal Portal
Lateral Plate Mesoderm
Outflow Tract
Sinus Venosus
Tail
 
13-18
stage 15
stage 16
stage 18
Anterior/Second Heart Field
Epicardium
Head Mesenchyme
Lateral Plate Mesoderm
Limb Buds
Neural Plate/Tube
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Tail
Sections pending.
19-24
stage 21
stage 23
stage 24
Anterior/Second Heart Field
Forebrain
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Leg
Limb Buds
Midbrain
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Wing
Sections pending.

Entry 3

GEISHA IdHDAC10.Anderson.2021Data SourceDirect Submission
Complete cDNA Template Probeshow
TCGAGCGGTGCGGCTGAGGCGCTGCTCAGGCGACCTGNGTGGGGAGCGTGGCGTCCGTGCGGCGGGGCCGGCTGTGCTG
CGGTGTGTTGTGCTGTGCGGGGTCGCTGAGCGCGAGCTCTCTCACATACCTGTCTCAGCCTGGGAAAAGTGCGAGATCC
TCCTGCAGGCTGACGCCCTGCATACATACGTTCTCACTGGCTGTTTTATTGTACGTCTGTTCCGTACCTGAGATACGCA
CCGAGGGACTCCTGCTTTGTTCTGTCTGTAGCGATGGCTTCAGGAACAGCCCTGATTTACGACGAGGCAATGACCAGGC
ATAAGCTGCTTTGGAATGATCCTATTTGTGATATTGAAGTGCCAGAAAGACTGTCAGCCTCCTATGAGCAGCTTCAGTG
TTACCATCTCGTGGAAAGATGTGTCCCTGTGCCTGCGAGAGAAGGAAGCGAGGAGGAAATCCTCTTAGTTCACAGTTCA
GAACACTTGGAGGCTGCAAAAAGCACACAGACAATGAATGAAGAGGAACTGAAAAGAATCTCTGGGAATTATGATTCTT
TTTTCTTTCATCCGAACACTTACCACTGTGCCAGGCTAGCTGTAGGAGCAGCTTTGCAACTAGTGGACTCTGTGATGTC
AGGAAAAGTATGCAATGGAATGGCATTAGTAAGACCTCCAGGTCACCACAGTCAGAGAAACGCAGCCAATGGGTTCTGT
TTGTTCAACAACGTCGCTATTGCAGCAGAATATGCCCAAACTGAAATATGGGTCTACAGAANAATCCTAAATTGTTTGA
CTGGGGATGTTGCACCAATGGGGCAAGGGAACTTCAATAATATATTTTGAAAGAATNNTCCNAAGTTGTTTTTGNATTT
TT
CommentsImages and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST759f10.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
stage 12
stage 12
Amnion
Anterior Intestinal Portal
Ear/Otic Placode
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Sinus Venosus
Somites
Tail
extraembryonic endoderm
Dorsal view
Ventral view
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.27678

Mouse

EmageMGI:2158340
EurexpressMGI:2158340
MGI GXDMGI:2158340

Frog

Xenbase5857297

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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