GEISHA - A Chicken Embryo Gene Expression Database
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NRP1
neuropilin 1

Gene
Official SymbolNRP1
Official Full Nameneuropilin 1
CGNC ID5395
also known asneuropilin-1, neuropilin-1|A5 protein, NRP1, Neuropilin-1 precursor (A5 protein)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204782
PolypeptideNP_990113
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.4032
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human8829ENSG00000099250MIM:602069
Mouse18186ENSMUSG00000025810All phenotypic alleles (6):Targeted, knock-out(2) Targeted, other(4) MGI:106206
Xenopus100101701, 397804480687
Zebrafish353246, 402973ENSDARG00000071865, ENSDARG00000027290ZDB-GENE-030519-2, ZDB-GENE-040611-1ZFIN:ZDB-GENE-030519-2, ZFIN:ZDB-GENE-040611-1
Gene Ontology
Molecular Functiongrowth factor binding, heparin binding, metal ion binding, semaphorin receptor activity, more...vascular endothelial growth factor-activated receptor activity
Biological Processangiogenesis, axon guidance, cell adhesion, endothelial cell chemotaxis, organ morphogenesis, more...vascular endothelial growth factor receptor signaling pathway
Cellular Componentintegral component of membrane
Links to other databases
Entrez Gene395560
Ensembl GeneENSGALG00000007140
KEGGgga:395560

Entry 1

GEISHA IdChEST948m8Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GTGCGCTCCTCTTCCTCAGGCTGCGAGCAGGAGCCGCCCGGGCGCTTCCCTTTCCCGGCCGGCACTCCCCGCGGCAGCG
CCGCGCTCCCTCGCTCGCTCCCCGCCGGGGCAGAGCCGCCCCGCAGCCCGCCCCGGCAGAGTGCTCCCGAGGTGCCAGC
AGCAGCCGCCAGGATTTTTGTCTGTCCTGTTTGTCTGTTTGTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTCTCCTCCT
CGTTTTCATTTGGCTTTCTAGTCTCGCTGGGAATGGCCGGGGCAGCGGCGCCAGGAGCGGGAACAAGTGTGGGGAAAGG
CAGAGGGAGCCGGAGCTGAACGCCAGGATGCGGGCGAGCTGAGGCTCAGAGCGAGCGGCCAACCTTCCTCTGCCCCCGG
GACTGCCCGTGCGAACCGGACCGTGCCTTCTGCTCCCGACTCCGGCCGGAGGATTTAAGACCTAGGAAGAGCTGTGCGT
GGAGGGCTTTATTTTTATTTTTTATTTTTTTCCTCCATATTTTTTGTCATTTCCCCGCTCTCGGAAGGGAAAATGGATT
GGGGACTTTTTC
Commentsno specific expression detected stage 6
no images

Entry 2

GEISHA IdNeuropilin-1Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CTTTATTTTTATTTTTTATTTTTTTCCTCCATATTTTTTGTCTTTTCCCCGCTCTCGGAAGGGAAAATGGATTGGGGAC
TTTTCCTGCACTGCGCAGCCCTCACCTTCACTCTCTCCAGGGCTCTGCGAAGCGATAAATGCGGCGACACGATCAAAAT
TCTAAGCCCCGGGTACCTCACCTCCCCCGGCTACCCGCAGTCCTACCACCCCAGCCAGAAGTGCGAGTGGCTGATCCAG
GCCCCGGAGCCCTACCAGCGGATCATGATCAACTTCAATCCGCACTTCGACCTGGAGGACCGCGACTGCAAGTATGATT
ATGTTGAAGTGATTGATGGAGATAATGCTGAAGGACGCTTATGGGGAAAGTACTGTGGAAAAATTGCTCCTCCTCCTTT
AGTGTCTTCGGGACCTTATCTTTTTATTAAGTTCGTTTCCGACTATGAAACGCATGGAGCAGGATTTTCTATCCGTTAT
GAAGTTTTCAAAAGAGGACCTGAATGCTCCAGAAACTTTACTTCATCAAGTGGAATGATAAAGTCCCCTGGATTCCCTG
AAAAATATCCCAATAGCCTTGAATGCACTTATATTATCTTTGCACCAAAGATGTCAGAGATTATACTGGAATTTGAAAG
CTTTGAACTAGAACCTGATTCAAATACTCCAGGGGGAGCATTCTGTCGCTATGACCGATTGGAAATCTGGGACGGATTC
CCTGATGTTGGCCCGCACATAGGGCGTTATTGTGGACAGAACAACCCAGGACGCGTCCGCTCTTCAACAGGGATTCTTT
CAATGGTATTTTACACTGACAGTGCAATAGCAAAAGAGGGATTTTCGGCAAACTACAGCGTGTCGCAGAGCAGTGTATC
AGAAGATTTCCAGTGCATGGAACCACTAGGTATGGAGTCAGGAGAAATTCACTCTGATCAAATCACTGTCTCCTCCCAG
TACAGTGCTATCTGGTCTTCAGAAAGATCCCGGCTAAATTATCCTGAAAACGGATGGACCCCAGGGGAAGATTCTGTCA
GAGAATGGATACAGGTAGACCTGGGCCTTCTTCGCTTCGTTTCGGGAATTGGGACCCAAGGAGCCATCTCAAAAGAGAC
AAAGAAAGAATATTACCTGAAAACATACCGTGTAGATGTCAGCTCCAATGGGGAAGACTGGATTACACTGAAGGAAGGA
AACAAGCCTGTTGTGTTTCAAGGGAATAGCAACCCCACTGATGTTGTTTACAGACCTTTTCCCAAACCAGTTTTAACAC
GTTTTGTACGAATTAAACCTGTGTCTTGGGAAAATGGTGTATCGCTGAGATTTGAAGTGTATGGCTGCAAGATAACAGA
TTATCCTTGCTCTGGGATGCTGGGCATGGTGTCTGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGAT
AGAAACTGGATCCCGGAAAATGCTCGCCTTATAACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATA
CAAATGAATGGCTTCAGATAGACCTTGGTGAAGAAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGA
AAACAAAGTATTCATGAAAAAATTCAAAATTGGCTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGC
AAGAAAAAGATAAAGACTTTTGAAGGCAACACCAACTACGACACACCTGAACTGCGGACTTTTGAACCCGTATCAACGA
GAATCATCCGCGTCTACCCTGAGAGAGCCACACACGCAGGACTGGGACTTCGAATGGAGCTGCTGGGATGTGAACTTGA
AGCTCCCACGGCTGTCCCTACTGTTTCCGAAGGCAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGT
GGCACAGGTGGAACTACCGTGCTGAACACAGAAAAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGT
ACAACTTAAACTGTGGCTTTGGCTGGGGATCCCACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAA
GTGGGCAATTCTGACCAGCAAAACTGGGCCAATTCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGAC
GAAAGCCAGAAAGGCAAAGTTGCCCGGCTGTTGAGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCT
GGTACCACATGTCTGGCCCGCATGTTGGCACCCTGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGT
GCTGCTGAGCCTGAACGGGCACCAGGCAAACTGCTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTAC
CAGGTGGTTATAGAGGGAGAAATTGGAAAGGGAAATGGAGGAATTGCTGTGGATGATATTAATATTGACAATCACATAT
CTCAAGAGGATTGCCAAAAATCAACTGATGTGGAGAGTGAAATAGTTGAAGAAGATCCAGAAAGTAATCAAACAGGGTT
TACTCCTTCATACCGTACAGATGAGGACTATGATGACATCTCCAGGAAACCAGGCAATGTCCTGAAGACGCTAGACCCA
ATCCTTATTACCATCATAGCCATGAGTGCACTTGGGGTGCTTTTAGGAGCCATTTGTGGAGTTGTCCTGTACTGTGCCT
GCTGGCACAATGGGATGTCAGAGAGGAACTTGTCTGCACTGGAGAATTACAATTTTGAGCTGGTCGATGGTGTAAAACT
GAAGAAAGATAAACTAAACACACAGAATTCTTACTCGGAAGCATGAAGGTATAAAGCAACTTGAGAAGTTTCAGAGAAT
CGGGATGGAAGGACATAGCTCGGTCGTGCTGGGGAACTGTTGATCATCTTTTACTGTACAGGCTGAAAAGTGCATTGAT
GACACTGAGCCAAGCTTTTCTCAGGAGCTTCAACGAGTGTGTAACCGATAAACATGGACAACGATCTGTGTTAACAATC
TGAATCATGTACAGTCTGCTTTTTCTGTTGGTTTTATTTGAAATAATCAAATGCTGGTGTTGAGACCAAGTATGATTGA
CTTCTAGTTCATTTTGTCTTTCTTTCTCTCCCTCTCTTTTGTTTTCCGTTAATGGGTAATTTTCTTTTTACTGTGCAAA
ATCCAAGATGCTGTCACAAAATGTATTCAGTGGGGTCCTTTGGATGGACATGCTGTCTGTAGCTCAGTGCCCAGAAATT
ATTGGAGTAACAGCAATTTAGTGGACTCCTGCACCTGTATTTGTGTATAATTGCTCGTGTTGTGCATAGGCAAAGAAGG
GTTAGGATGTTTTTGAAAGTACTGCTGCATCAGTACCAATATAGTGTGTCAGCTCTGTTTACAAAGCAATACAGTCAAA
TTTTATTGATGTTTTTCAGTGTTGTACTAAATTTTGTGCTTGTGACTCCATAAAAGCAGTATGTGCCATCATCAGACAC
AACTGGTAACAGATTATACTGCCTAAAATCTAAACAAAAAAGTCCTTGGCACTGGCTAGTGTATGTCCTCTCAAGTGCC
TTTTTGTTTGTACTGCTTCTCATTGTGTTAACATTGACTACAGCTCTGCTTCTCTCCAATTATGCCCTTGTCTTTAATC
ATATTCTGATGGCTCACTGAATAAAATAAAAGTATATTTTAGTGTAAGAGAGTAGCCTCGGCAAGGCAAGGGCTAATCA
GATTTACCACCTGGTTCAATTGTTCTGCTTTCTGTATTTCAACTTCATGTCTCTTGACCCTTTTGTATAAAGCTGCAAT
ATCCTCTTTTAATGTTCTTTCATATAGAATGTATTTTCAAATGTAAAATCTCTCTACCTTTC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-9
stage 7
stage 8
stage 9
Anterior Intestinal Portal
Area Opaca
Blood Islands
Blood Vessels
Head Process
Lateral Plate Mesoderm
Somites
 

Entry 3

GEISHA IdNpn1.Lwigale.2007Data SourcePublication
Forward cDNA Template Probeshow
GCCTTCTTCGCTTCGTTTCGGGAATTGGGACCCAAGGAGCCATCTCAAAAGAGACAAAGAAAGAATATTACCTGAAAAC
ATACCGTGTAGATGTCAGCTCCAATGGGGAAGACTGGATTACACTGAAGGAAGGAAACAAGCCTGTTGTGTTTCAAGGG
AATAGCAACCCCACTGATGTTGTTTACAGACCTTTTCCCAAACCAGTTTTAACACGTTTTGTACGAATTAAACCTGTGT
CTTGGGAAAATGGTGTATCGCTGAGATTTGAAGTGTATGGCTGCAAGATAACAGATTATCCTTGCTCTGGGATGCTGGG
CATGGTGTCTGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGATAGAAACTGGATCCCGGAAAATGCT
CGCCTTATAACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATACAAATGAATGGCTTCAGATAGACC
TTGGTGAAGAAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGAAAACAAAGTATTCATGAAAAAATT
CAAAATTGGCTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGCAAGAAAAAGATAAAGACTTTTGAA
GGCAACACCAACTACGACACACCT
CitationLwigale PY, Bronner-Fraser M. Lens-derived Semaphorin3A regulates sensory innervation of the cornea. Dev Biol. 2007 Jun 15;306(2):750-9. Epub 2007 Apr 18.
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsAuthors said: (Npn1; forward 5′-gccttcttcgcttcgtttcg-3′, reverse 5′-aggtgtgtcgtagttggtgttgcc-3'). The amplified probe sequence was extracted from NM_204782.1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 26
Cranial Ganglion
 
31-36
stage 34
stage 36
Cranial Ganglion
 

Entry 4

GEISHA IdNp1.Davey.2007Data SourcePublication
Complete cDNA Template Probeshow
TGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGATAGAAACTGGATCCCGGAAAATGCTCGCCTTATA
ACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATACAAATGAATGGCTTCAGATAGACCTTGGTGAAG
AAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGAAAACAAAGTATTCATGAAAAAATTCAAAATTGG
CTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGCAAGAAAAAGATAAAGACTTTTGAAGGCAACACC
AACTACGACACACCTGAACTGCGGACTTTTGAACCCGTATCAACGAGAATCATCCGCGTCTACCCTGAGAGAGCCACAC
ACGCAGGACTGGGACTTCGAATGGAGCTGCTGGGATGTGAACTTGAAGCTCCCACGGCTGTCCCTACTGTTTCCGAAGG
CAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGTGGCACAGGTGGAACTACCGTGCTGAACACAGAA
AAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGTACAACTTAAACTGTGGCTTTGGCTGGGGATCCC
ACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAAGTGGGCAATTCTGACCAGCAAAACTGGGCCAAT
TCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGACGAAAGCCAGAAAGGCAAAGTTGCCCGGCTGTTG
AGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCTGGTACCACATGTCTGGCCCGCATGTTGGCACCC
TGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGTGCTGCTGAGCCTGAACGGGCACCAGGCAAACTG
CTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTACCAGGTGGTTATAGAGGGAGAAATTGGAAAGGG
CitationDavey MG, James J, Paton IR, Burt DW, Tickle C. Analysis of talpid3 and wild-type chicken embryos reveals roles fro Hedgehog signalling in development of the limb bud vasculature. Dev Biol. 2007 Jan 1;301(1):155-65.
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsAccording to authors , "Neuropilin1 (forward primer 5′-TGGGCTCATTCCTGACTC-3′, reverse primer 5′-CCCTTTCCAATTTCTCCCTC 3'). The probe sequence was isolated from NCBI Acc# NM_204782.1 using this information.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25
stage 25
stage 25
Unlabeled
Wing Mesenchyme
 

Entry 5

GEISHA IdNeuropilin1.Riley.2010Data SourcePublication
Complete cDNA Template Probeshow
CTTTATTTTTATTTTTTATTTTTTTCCTCCATATTTTTTGTCTTTTCCCCGCTCTCGGAAGGGAAAATGGATTGGGGAC
TTTTCCTGCACTGCGCAGCCCTCACCTTCACTCTCTCCAGGGCTCTGCGAAGCGATAAATGCGGCGACACGATCAAAAT
TCTAAGCCCCGGGTACCTCACCTCCCCCGGCTACCCGCAGTCCTACCACCCCAGCCAGAAGTGCGAGTGGCTGATCCAG
GCCCCGGAGCCCTACCAGCGGATCATGATCAACTTCAATCCGCACTTCGACCTGGAGGACCGCGACTGCAAGTATGATT
ATGTTGAAGTGATTGATGGAGATAATGCTGAAGGACGCTTATGGGGAAAGTACTGTGGAAAAATTGCTCCTCCTCCTTT
AGTGTCTTCGGGACCTTATCTTTTTATTAAGTTCGTTTCCGACTATGAAACGCATGGAGCAGGATTTTCTATCCGTTAT
GAAGTTTTCAAAAGAGGACCTGAATGCTCCAGAAACTTTACTTCATCAAGTGGAATGATAAAGTCCCCTGGATTCCCTG
AAAAATATCCCAATAGCCTTGAATGCACTTATATTATCTTTGCACCAAAGATGTCAGAGATTATACTGGAATTTGAAAG
CTTTGAACTAGAACCTGATTCAAATACTCCAGGGGGAGCATTCTGTCGCTATGACCGATTGGAAATCTGGGACGGATTC
CCTGATGTTGGCCCGCACATAGGGCGTTATTGTGGACAGAACAACCCAGGACGCGTCCGCTCTTCAACAGGGATTCTTT
CAATGGTATTTTACACTGACAGTGCAATAGCAAAAGAGGGATTTTCGGCAAACTACAGCGTGTCGCAGAGCAGTGTATC
AGAAGATTTCCAGTGCATGGAACCACTAGGTATGGAGTCAGGAGAAATTCACTCTGATCAAATCACTGTCTCCTCCCAG
TACAGTGCTATCTGGTCTTCAGAAAGATCCCGGCTAAATTATCCTGAAAACGGATGGACCCCAGGGGAAGATTCTGTCA
GAGAATGGATACAGGTAGACCTGGGCCTTCTTCGCTTCGTTTCGGGAATTGGGACCCAAGGAGCCATCTCAAAAGAGAC
AAAGAAAGAATATTACCTGAAAACATACCGTGTAGATGTCAGCTCCAATGGGGAAGACTGGATTACACTGAAGGAAGGA
AACAAGCCTGTTGTGTTTCAAGGGAATAGCAACCCCACTGATGTTGTTTACAGACCTTTTCCCAAACCAGTTTTAACAC
GTTTTGTACGAATTAAACCTGTGTCTTGGGAAAATGGTGTATCGCTGAGATTTGAAGTGTATGGCTGCAAGATAACAGA
TTATCCTTGCTCTGGGATGCTGGGCATGGTGTCTGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGAT
AGAAACTGGATCCCGGAAAATGCTCGCCTTATAACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATA
CAAATGAATGGCTTCAGATAGACCTTGGTGAAGAAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGA
AAACAAAGTATTCATGAAAAAATTCAAAATTGGCTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGC
AAGAAAAAGATAAAGACTTTTGAAGGCAACACCAACTACGACACACCTGAACTGCGGACTTTTGAACCCGTATCAACGA
GAATCATCCGCGTCTACCCTGAGAGAGCCACACACGCAGGACTGGGACTTCGAATGGAGCTGCTGGGATGTGAACTTGA
AGCTCCCACGGCTGTCCCTACTGTTTCCGAAGGCAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGT
GGCACAGGTGGAACTACCGTGCTGAACACAGAAAAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGT
ACAACTTAAACTGTGGCTTTGGCTGGGGATCCCACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAA
GTGGGCAATTCTGACCAGCAAAACTGGGCCAATTCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGAC
GAAAGCCAGAAAGGCAAAGTTGCCCGGCTGTTGAGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCT
GGTACCACATGTCTGGCCCGCATGTTGGCACCCTGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGT
GCTGCTGAGCCTGAACGGGCACCAGGCAAACTGCTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTAC
CAGGTGGTTATAGAGGGAGAAATTGGAAAGGGAAATGGAGGAATTGCTGTGGATGATATTAATATTGACAATCACATAT
CTCAAGAGGATTGCCAAAAATCAACTGATGTGGAGAGTGAAATAGTTGAAGAAGATCCAGAAAGTAATCAAACAGGGTT
TACTCCTTCATACCGTACAGATGAGGACTATGATGACATCTCCAGGAAACCAGGCAATGTCCTGAAGACGCTAGACCCA
ATCCTTATTACCATCATAGCCATGAGTGCACTTGGGGTGCTTTTAGGAGCCATTTGTGGAGTTGTCCTGTACTGTGCCT
GCTGGCACAATGGGATGTCAGAGAGGAACTTGTCTGCACTGGAGAATTACAATTTTGAGCTGGTCGATGGTGTAAAACT
GAAGAAAGATAAACTAAACACACAGAATTCTTACTCGGAAGCATGAAGGTATAAAGCAACTTGAGAAGTTTCAGAGAAT
CGGGATGGAAGGACATAGCTCGGTCGTGCTGGGGAACTGTTGATCATCTTTTACTGTACAGGCTGAAAAGTGCATTGAT
GACACTGAGCCAAGCTTTTCTCAGGAGCTTCAACGAGTGTGTAACCGATAAACATGGACAACGATCTGTGTTAACAATC
TGAATCATGTACAGTCTGCTTTTTCTGTTGGTTTTATTTGAAATAATCAAATGCTGGTGTTGAGACCAAGTATGATTGA
CTTCTAGTTCATTTTGTCTTTCTTTCTCTCCCTCTCTTTTGTTTTCCGTTAATGGGTAATTTTCTTTTTACTGTGCAAA
ATCCAAGATGCTGTCACAAAATGTATTCAGTGGGGTCCTTTGGATGGACATGCTGTCTGTAGCTCAGTGCCCAGAAATT
ATTGGAGTAACAGCAATTTAGTGGACTCCTGCACCTGTATTTGTGTATAATTGCTCGTGTTGTGCATAGGCAAAGAAGG
GTTAGGATGTTTTTGAAAGTACTGCTGCATCAGTACCAATATAGTGTGTCAGCTCTGTTTACAAAGCAATACAGTCAAA
TTTTATTGATGTTTTTCAGTGTTGTACTAAATTTTGTGCTTGTGACTCCATAAAAGCAGTATGTGCCATCATCAGACAC
AACTGGTAACAGATTATACTGCCTAAAATCTAAACAAAAAAGTCCTTGGCACTGGCTAGTGTATGTCCTCTCAAGTGCC
TTTTTGTTTGTACTGCTTCTCATTGTGTTAACATTGACTACAGCTCTGCTTCTCTCCAATTATGCCCTTGTCTTTAATC
ATATTCTGATGGCTCACTGAATAAAATAAAAGTATATTTTAGTGTAAGAGAGTAGCCTCGGCAAGGCAAGGGCTAATCA
GATTTACCACCTGGTTCAATTGTTCTGCTTTCTGTATTTCAACTTCATGTCTCTTGACCCTTTTGTATAAAGCTGCAAT
ATCCTCTTTTAATGTTCTTTCATATAGAATGTATTTTCAAATGTAAAATCTCTCTACCTTTC
CitationRiley KL, Gledhill S, Schubert FR. Early expression of axon guidance molecules in the embryonic chick mesencephalon and pretectum. Int J Dev Biol. 2010;54(4):743-53.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 13
stage 17
Midbrain
 
19-20
stage 20
Midbrain
 

Entry 6

GEISHA IdNRP1.Kubilus.2010Data SourcePublication
Complete cDNA Template Probeshow
TGTCCCTACTGTTTCCGAAGGCAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGTGGCACAGGTGGA
ACTACCGTGCTGAACACAGAAAAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGTACAACTTAAACT
GTGGCTTTGGCTGGGGATCCCACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAAGTGGGCAATTCT
GACCAGCAAAACTGGGCCAATTCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGACGAAAGCCAGAAA
GGCAAAGTTGCCCGGCTGTTGAGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCTGGTACCACATGT
CTGGCCCGCATGTTGGCACCCTGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGTGCTGCTGAGCCT
GAACGGGCACCAGGCAAACTGCTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTACCAGGTGGTTATA
GAGGGAGAAATTGGAAAGGGAAATGGAGGAATTGCTGTGGATGATATTAATATTGACAATCACATATCTCAAGAGGATT
GCCAAAAATCAACTGATGTGGAGAGTGAAATAGTTGAAGAAGATCCAGAAAGTAATCAAACAGGGTTTACTCCTTCATA
CCGTACAGATGAGGACTATGATGACATCTCCAGGAAACCAGGCAA
CitationKubilus JK, Linsenmayer TF. Developmental guidance of embryonic corneal innervation: roles of Semaphorin3A and Slit2. Dev Biol. 2010 Aug 1;344(1):172-84. Epub 2010 May 18.
CopyrightCopyright © 2011 Elsevier B.V. All rights reserved.
CommentsThe probe for NRP1 was amplified by PCR using the following primers: Forward Primer: TGTCCCTACTGTTTCCGAAGGCAA Reverse Primer: TTGCCTGGTTTCCTGGAGATGTCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
  
25-30
stage 30
Cranial Ganglia
 
31-40
stage 40
Cranial Ganglia
 

Entry 7

GEISHA IdNPN1.Mauti.2006Data SourcePublication
Complete cDNA Template Probeshow
CTTTATTTTTATTTTTTATTTTTTTCCTCCATATTTTTTGTCTTTTCCCCGCTCTCGGAAGGGAAAATGGATTGGGGAC
TTTTCCTGCACTGCGCAGCCCTCACCTTCACTCTCTCCAGGGCTCTGCGAAGCGATAAATGCGGCGACACGATCAAAAT
TCTAAGCCCCGGGTACCTCACCTCCCCCGGCTACCCGCAGTCCTACCACCCCAGCCAGAAGTGCGAGTGGCTGATCCAG
GCCCCGGAGCCCTACCAGCGGATCATGATCAACTTCAATCCGCACTTCGACCTGGAGGACCGCGACTGCAAGTATGATT
ATGTTGAAGTGATTGATGGAGATAATGCTGAAGGACGCTTATGGGGAAAGTACTGTGGAAAAATTGCTCCTCCTCCTTT
AGTGTCTTCGGGACCTTATCTTTTTATTAAGTTCGTTTCCGACTATGAAACGCATGGAGCAGGATTTTCTATCCGTTAT
GAAGTTTTCAAAAGAGGACCTGAATGCTCCAGAAACTTTACTTCATCAAGTGGAATGATAAAGTCCCCTGGATTCCCTG
AAAAATATCCCAATAGCCTTGAATGCACTTATATTATCTTTGCACCAAAGATGTCAGAGATTATACTGGAATTTGAAAG
CTTTGAACTAGAACCTGATTCAAATACTCCAGGGGGAGCATTCTGTCGCTATGACCGATTGGAAATCTGGGACGGATTC
CCTGATGTTGGCCCGCACATAGGGCGTTATTGTGGACAGAACAACCCAGGACGCGTCCGCTCTTCAACAGGGATTCTTT
CAATGGTATTTTACACTGACAGTGCAATAGCAAAAGAGGGATTTTCGGCAAACTACAGCGTGTCGCAGAGCAGTGTATC
AGAAGATTTCCAGTGCATGGAACCACTAGGTATGGAGTCAGGAGAAATTCACTCTGATCAAATCACTGTCTCCTCCCAG
TACAGTGCTATCTGGTCTTCAGAAAGATCCCGGCTAAATTATCCTGAAAACGGATGGACCCCAGGGGAAGATTCTGTCA
GAGAATGGATACAGGTAGACCTGGGCCTTCTTCGCTTCGTTTCGGGAATTGGGACCCAAGGAGCCATCTCAAAAGAGAC
AAAGAAAGAATATTACCTGAAAACATACCGTGTAGATGTCAGCTCCAATGGGGAAGACTGGATTACACTGAAGGAAGGA
AACAAGCCTGTTGTGTTTCAAGGGAATAGCAACCCCACTGATGTTGTTTACAGACCTTTTCCCAAACCAGTTTTAACAC
GTTTTGTACGAATTAAACCTGTGTCTTGGGAAAATGGTGTATCGCTGAGATTTGAAGTGTATGGCTGCAAGATAACAGA
TTATCCTTGCTCTGGGATGCTGGGCATGGTGTCTGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGAT
AGAAACTGGATCCCGGAAAATGCTCGCCTTATAACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATA
CAAATGAATGGCTTCAGATAGACCTTGGTGAAGAAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGA
AAACAAAGTATTCATGAAAAAATTCAAAATTGGCTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGC
AAGAAAAAGATAAAGACTTTTGAAGGCAACACCAACTACGACACACCTGAACTGCGGACTTTTGAACCCGTATCAACGA
GAATCATCCGCGTCTACCCTGAGAGAGCCACACACGCAGGACTGGGACTTCGAATGGAGCTGCTGGGATGTGAACTTGA
AGCTCCCACGGCTGTCCCTACTGTTTCCGAAGGCAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGT
GGCACAGGTGGAACTACCGTGCTGAACACAGAAAAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGT
ACAACTTAAACTGTGGCTTTGGCTGGGGATCCCACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAA
GTGGGCAATTCTGACCAGCAAAACTGGGCCAATTCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGAC
GAAAGCCAGAAAGGCAAAGTTGCCCGGCTGTTGAGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCT
GGTACCACATGTCTGGCCCGCATGTTGGCACCCTGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGT
GCTGCTGAGCCTGAACGGGCACCAGGCAAACTGCTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTAC
CAGGTGGTTATAGAGGGAGAAATTGGAAAGGGAAATGGAGGAATTGCTGTGGATGATATTAATATTGACAATCACATAT
CTCAAGAGGATTGCCAAAAATCAACTGATGTGGAGAGTGAAATAGTTGAAGAAGATCCAGAAAGTAATCAAACAGGGTT
TACTCCTTCATACCGTACAGATGAGGACTATGATGACATCTCCAGGAAACCAGGCAATGTCCTGAAGACGCTAGACCCA
ATCCTTATTACCATCATAGCCATGAGTGCACTTGGGGTGCTTTTAGGAGCCATTTGTGGAGTTGTCCTGTACTGTGCCT
GCTGGCACAATGGGATGTCAGAGAGGAACTTGTCTGCACTGGAGAATTACAATTTTGAGCTGGTCGATGGTGTAAAACT
GAAGAAAGATAAACTAAACACACAGAATTCTTACTCGGAAGCATGAAGGTATAAAGCAACTTGAGAAGTTTCAGAGAAT
CGGGATGGAAGGACATAGCTCGGTCGTGCTGGGGAACTGTTGATCATCTTTTACTGTACAGGCTGAAAAGTGCATTGAT
GACACTGAGCCAAGCTTTTCTCAGGAGCTTCAACGAGTGTGTAACCGATAAACATGGACAACGATCTGTGTTAACAATC
TGAATCATGTACAGTCTGCTTTTTCTGTTGGTTTTATTTGAAATAATCAAATGCTGGTGTTGAGACCAAGTATGATTGA
CTTCTAGTTCATTTTGTCTTTCTTTCTCTCCCTCTCTTTTGTTTTCCGTTAATGGGTAATTTTCTTTTTACTGTGCAAA
ATCCAAGATGCTGTCACAAAATGTATTCAGTGGGGTCCTTTGGATGGACATGCTGTCTGTAGCTCAGTGCCCAGAAATT
ATTGGAGTAACAGCAATTTAGTGGACTCCTGCACCTGTATTTGTGTATAATTGCTCGTGTTGTGCATAGGCAAAGAAGG
GTTAGGATGTTTTTGAAAGTACTGCTGCATCAGTACCAATATAGTGTGTCAGCTCTGTTTACAAAGCAATACAGTCAAA
TTTTATTGATGTTTTTCAGTGTTGTACTAAATTTTGTGCTTGTGACTCCATAAAAGCAGTATGTGCCATCATCAGACAC
AACTGGTAACAGATTATACTGCCTAAAATCTAAACAAAAAAGTCCTTGGCACTGGCTAGTGTATGTCCTCTCAAGTGCC
TTTTTGTTTGTACTGCTTCTCATTGTGTTAACATTGACTACAGCTCTGCTTCTCTCCAATTATGCCCTTGTCTTTAATC
ATATTCTGATGGCTCACTGAATAAAATAAAAGTATATTTTAGTGTAAGAGAGTAGCCTCGGCAAGGCAAGGGCTAATCA
GATTTACCACCTGGTTCAATTGTTCTGCTTTCTGTATTTCAACTTCATGTCTCTTGACCCTTTTGTATAAAGCTGCAAT
ATCCTCTTTTAATGTTCTTTCATATAGAATGTATTTTCAAATGTAAAATCTCTCTACCTTTC
CitationMauti O, Sadhu R, Gemayel J, Gesemann M, Stoeckli ET. Expression patterns of plexins and neuropilins are consistent with cooperative and separate functions during neural development. BMC Dev Biol. 2006; 6: 32. Published online 2006 July 17.
Copyright), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204782.1 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
Spinal Cord
 
19-24
stage 22
stage 22
Spinal Cord
Spinal Ganglia and Nerves
 
25-30
stage 25
stage 25
stage 30
stage 30
Spinal Cord
Spinal Ganglia and Nerves
 
31-40
stage 35
stage 35
stage 40
stage 40
Spinal Cord
Spinal Ganglia and Nerves
 

Entry 8

GEISHA IdNP1.Herzog.2005Data SourcePublication
Complete cDNA Template Probeshow
CTTTATTTTTATTTTTTATTTTTTTCCTCCATATTTTTTGTCTTTTCCCCGCTCTCGGAAGGGAAAATGGATTGGGGAC
TTTTCCTGCACTGCGCAGCCCTCACCTTCACTCTCTCCAGGGCTCTGCGAAGCGATAAATGCGGCGACACGATCAAAAT
TCTAAGCCCCGGGTACCTCACCTCCCCCGGCTACCCGCAGTCCTACCACCCCAGCCAGAAGTGCGAGTGGCTGATCCAG
GCCCCGGAGCCCTACCAGCGGATCATGATCAACTTCAATCCGCACTTCGACCTGGAGGACCGCGACTGCAAGTATGATT
ATGTTGAAGTGATTGATGGAGATAATGCTGAAGGACGCTTATGGGGAAAGTACTGTGGAAAAATTGCTCCTCCTCCTTT
AGTGTCTTCGGGACCTTATCTTTTTATTAAGTTCGTTTCCGACTATGAAACGCATGGAGCAGGATTTTCTATCCGTTAT
GAAGTTTTCAAAAGAGGACCTGAATGCTCCAGAAACTTTACTTCATCAAGTGGAATGATAAAGTCCCCTGGATTCCCTG
AAAAATATCCCAATAGCCTTGAATGCACTTATATTATCTTTGCACCAAAGATGTCAGAGATTATACTGGAATTTGAAAG
CTTTGAACTAGAACCTGATTCAAATACTCCAGGGGGAGCATTCTGTCGCTATGACCGATTGGAAATCTGGGACGGATTC
CCTGATGTTGGCCCGCACATAGGGCGTTATTGTGGACAGAACAACCCAGGACGCGTCCGCTCTTCAACAGGGATTCTTT
CAATGGTATTTTACACTGACAGTGCAATAGCAAAAGAGGGATTTTCGGCAAACTACAGCGTGTCGCAGAGCAGTGTATC
AGAAGATTTCCAGTGCATGGAACCACTAGGTATGGAGTCAGGAGAAATTCACTCTGATCAAATCACTGTCTCCTCCCAG
TACAGTGCTATCTGGTCTTCAGAAAGATCCCGGCTAAATTATCCTGAAAACGGATGGACCCCAGGGGAAGATTCTGTCA
GAGAATGGATACAGGTAGACCTGGGCCTTCTTCGCTTCGTTTCGGGAATTGGGACCCAAGGAGCCATCTCAAAAGAGAC
AAAGAAAGAATATTACCTGAAAACATACCGTGTAGATGTCAGCTCCAATGGGGAAGACTGGATTACACTGAAGGAAGGA
AACAAGCCTGTTGTGTTTCAAGGGAATAGCAACCCCACTGATGTTGTTTACAGACCTTTTCCCAAACCAGTTTTAACAC
GTTTTGTACGAATTAAACCTGTGTCTTGGGAAAATGGTGTATCGCTGAGATTTGAAGTGTATGGCTGCAAGATAACAGA
TTATCCTTGCTCTGGGATGCTGGGCATGGTGTCTGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGAT
AGAAACTGGATCCCGGAAAATGCTCGCCTTATAACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATA
CAAATGAATGGCTTCAGATAGACCTTGGTGAAGAAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGA
AAACAAAGTATTCATGAAAAAATTCAAAATTGGCTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGC
AAGAAAAAGATAAAGACTTTTGAAGGCAACACCAACTACGACACACCTGAACTGCGGACTTTTGAACCCGTATCAACGA
GAATCATCCGCGTCTACCCTGAGAGAGCCACACACGCAGGACTGGGACTTCGAATGGAGCTGCTGGGATGTGAACTTGA
AGCTCCCACGGCTGTCCCTACTGTTTCCGAAGGCAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGT
GGCACAGGTGGAACTACCGTGCTGAACACAGAAAAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGT
ACAACTTAAACTGTGGCTTTGGCTGGGGATCCCACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAA
GTGGGCAATTCTGACCAGCAAAACTGGGCCAATTCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGAC
GAAAGCCAGAAAGGCAAAGTTGCCCGGCTGTTGAGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCT
GGTACCACATGTCTGGCCCGCATGTTGGCACCCTGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGT
GCTGCTGAGCCTGAACGGGCACCAGGCAAACTGCTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTAC
CAGGTGGTTATAGAGGGAGAAATTGGAAAGGGAAATGGAGGAATTGCTGTGGATGATATTAATATTGACAATCACATAT
CTCAAGAGGATTGCCAAAAATCAACTGATGTGGAGAGTGAAATAGTTGAAGAAGATCCAGAAAGTAATCAAACAGGGTT
TACTCCTTCATACCGTACAGATGAGGACTATGATGACATCTCCAGGAAACCAGGCAATGTCCTGAAGACGCTAGACCCA
ATCCTTATTACCATCATAGCCATGAGTGCACTTGGGGTGCTTTTAGGAGCCATTTGTGGAGTTGTCCTGTACTGTGCCT
GCTGGCACAATGGGATGTCAGAGAGGAACTTGTCTGCACTGGAGAATTACAATTTTGAGCTGGTCGATGGTGTAAAACT
GAAGAAAGATAAACTAAACACACAGAATTCTTACTCGGAAGCATGAAGGTATAAAGCAACTTGAGAAGTTTCAGAGAAT
CGGGATGGAAGGACATAGCTCGGTCGTGCTGGGGAACTGTTGATCATCTTTTACTGTACAGGCTGAAAAGTGCATTGAT
GACACTGAGCCAAGCTTTTCTCAGGAGCTTCAACGAGTGTGTAACCGATAAACATGGACAACGATCTGTGTTAACAATC
TGAATCATGTACAGTCTGCTTTTTCTGTTGGTTTTATTTGAAATAATCAAATGCTGGTGTTGAGACCAAGTATGATTGA
CTTCTAGTTCATTTTGTCTTTCTTTCTCTCCCTCTCTTTTGTTTTCCGTTAATGGGTAATTTTCTTTTTACTGTGCAAA
ATCCAAGATGCTGTCACAAAATGTATTCAGTGGGGTCCTTTGGATGGACATGCTGTCTGTAGCTCAGTGCCCAGAAATT
ATTGGAGTAACAGCAATTTAGTGGACTCCTGCACCTGTATTTGTGTATAATTGCTCGTGTTGTGCATAGGCAAAGAAGG
GTTAGGATGTTTTTGAAAGTACTGCTGCATCAGTACCAATATAGTGTGTCAGCTCTGTTTACAAAGCAATACAGTCAAA
TTTTATTGATGTTTTTCAGTGTTGTACTAAATTTTGTGCTTGTGACTCCATAAAAGCAGTATGTGCCATCATCAGACAC
AACTGGTAACAGATTATACTGCCTAAAATCTAAACAAAAAAGTCCTTGGCACTGGCTAGTGTATGTCCTCTCAAGTGCC
TTTTTGTTTGTACTGCTTCTCATTGTGTTAACATTGACTACAGCTCTGCTTCTCTCCAATTATGCCCTTGTCTTTAATC
ATATTCTGATGGCTCACTGAATAAAATAAAAGTATATTTTAGTGTAAGAGAGTAGCCTCGGCAAGGCAAGGGCTAATCA
GATTTACCACCTGGTTCAATTGTTCTGCTTTCTGTATTTCAACTTCATGTCTCTTGACCCTTTTGTATAAAGCTGCAAT
ATCCTCTTTTAATGTTCTTTCATATAGAATGTATTTTCAAATGTAAAATCTCTCTACCTTTC
CitationHerzog Y, Guttmann-Raviv N, Neufeld G. Segregation of arterial and venous markers in subpopulations of blood islands before vessel formation. Dev Dyn. 2005 Apr;232(4):1047-55.
CopyrightCopyright © 2005 Wiley-Liss, Inc.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204782.1 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
stage 9
stage 9
stage 9
stage 9
stage 11
stage 11
Anterior Intestinal Portal
Area Opaca
Blood Islands
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
HH stage 9+
13-15
stage 15
stage 15
Area Opaca
Area Pellucida
Arteries
Blood Islands
Extraembryonic Blood Vessels
Veins
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.4032

Mouse

EmageMGI:106206
EurexpressMGI:106206
MGI GXDMGI:106206

Frog

Xenbase480687

Fruit Fly

BDGP

Zebra Finch

ZEBrANRP1

Zebrafish

ZFINZDB-GENE-030519-2, ZDB-GENE-040611-1
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