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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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DAG1
dystroglycan 1

Gene

Official Symbol	DAG1
Official Full Name	dystroglycan 1
CGNC ID	59244
also known as	dystroglycan\|dystroglycan 1 (dystrophin-associated glycoprotein 1)
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001097540
Polypeptide	NP_001091009
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.52084

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	100049058
Ensembl Gene	ENSGALG00000027710
KEGG	gga:100049058

Entry 1

GEISHA Id	DAG1.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5’-TGACGAACCACATCGACAGG-3’
Reverse cDNA Template Primer	5’-AATTAACCCTCACTAAAGGGACCGACACGTTCAGAGGTT-3’	cDNA Template Length	626
Complete cDNA Template Probe	show TGACGAACCACATCGACAGGGTGGACGCGTGGGAGGGGACTTACTTCGAGGTGAAAATACCCTCGGATACTTTCTACGA CAAGGAGGATACCACCACTGACAAGCTGCAGCTGACCTTGAAGCTGAAGGAGCAGCAAATGATCGAGGAGAATTCGTGG GTCCAGTTCAACAGCACCAGCCAGCTCATGTACGGCATGCCGGACCGCAGCCACGTGGGGAAGCACGAGTACTTCATGT ACGCCACCGACAAAGGGGGGCTGTTTGCCGTGGACGCTTTTGAAATCCACGTCCACAAACGCCCGCACGGGGACAAATC CCCGGTGAAGTTCAAGGCCAGGCTGGAAGGAGACCACAGCGCGGTGGCGAACGACATCCATAAGAAGATCATGCTGGTG AAGAAGCTGGCCCTGGCGTTCGGCGATAGGAACAGCAGCACCATCACGGTGCAGGACATCGCCAAGGGCTCCATCGTGG TGGAATGGACCAACAACACCCTGCCCCTGGAGCCCTGCCCCCGCGAGCAGATCCGGACTTTGAGCAAAAAGATCGCGGA AGACTCCGGGGGCGCGAGCCCGGCTTTCTCCAACATCCTGCAGCCGGAGTTCAAACCTCTGAACGTGTCGGTC

Stage

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1-3

stage 3

Epiblast
Extraembryonic Mesoderm

4-6

stage 4

stage 6

Early Endoderm
Early Mesoderm
Epiblast
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
extraembryonic endoderm

7-12

stage 9

stage 10

Widespread Expression

13-18

stage 13

stage 16

stage 18

Ectoderm
Foregut
Lateral Plate Mesoderm
Mesonephros
Myotome
Neural Plate/Tube
Notochord
Sclerotome
Sinus Venosus
Somatic Mesoderm
Somites
Ventricles
Widespread Expression
extraembryonic ectoderm

19-24

stage 22

stage 23

Foregut
Liver
Lung
Mesonephros
Myotome
Notochord
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Spinal Cord
Ventricles
Widespread Expression

25-26

stage 26

Liver
Lung
Myotome
Sclerotome
Spinal Cord
Ventricles
Widespread Expression

Entry 2

GEISHA Id	DAG1.Javerzat.2009	Data Source	Publication
Complete cDNA Template Probe	show ATGACTGTTGGATGTGTCCCGCAGCCCCCGTTCCTGGGGAGGACTTTGCTCCCAGTGCTGCTGCTCGCAGCCTCAGCTC GCTGCCACTGGCCCAGCGAGCCGGCAGAAGTGGTGCGGGACTGGGAAAACCAGCTGGAGGCCTCCATGCACTCCGTGCT CTCGGACCTCCGAGAGACTGTGCCGGCCGTGGTGGGGATACCAGACAGCTCCGCCGTGGTGGGCCGCTTCTTCAGAGTC TCCATCCCCACAGATTTAATTGCTTCCAATGGAGAAGCAGTCCAGGTCTCCGAAGCTGGGAAGGAGTCTTTGCCTTCGT GGTTACACTGGAATGCGGAGAGCAGCTCCCTGGAAGGGCTGCCCCTGGACACGGACAAGGGCGTCCACTACATCTCGGT GACCACGCTGCAGCCCTTCCCCAACGGCAGCTATGTGCCGCAGGCCGCCAACGTCTTCTCCGTGGAGGTGCACCAGGAG GACCACAGCGAGCCGCAGTCGCTGCGAGCGGCAGCCCAGGAGGCGGGCGATGCCGCGCCGTTCGTGTGCGGTGCGGAGG AGCCGGTCACCATCCTGACCGTCATCCTGGACGCCGATTTGACAAAAATGACACCAAAGCAGAGGATCGAACTTTTAAA CAGAATGAGGAGCTTCTCAGAGGTGGAGCTTCACAACATGAAGTTGGTTCCTGTTGTAAATAACAGACTCTTTGACATG TCGGCCTTCATGGCTGGGCCGGGAAACGCAAAGAAGGTGGTGGAAAACGGGGCCTTACTCTCGTGGAAACTGGGCTGTT CTTTGAGCCAAAACAGCGTCCCCAACATCAGCAAGGTTGAGGCCCCGGCGAAAGAAGGGACTATGTCTGCCCGCCTCGG CTACCCTGTGGTCGGCTGGCACATCGCTAACAAGAAACCTCACCTCCCAAAAAGGATGCGACGGCAGATCAACGCCACC CCCACGCCTCTGACCGCCATCGGACCCCCCACCACCGCCGCTCAAGAGCCACCGACGCGGATCGTCCCCACCCCGACGT CGCCCGCCATCGCTCCCCCCACGGAGACGACGGCCCCGCCGGTCAGGGAGCCCATCCCGCTGCCGAGGAAGCCTACGGT CACCATCAGGACGAGGGGCCCCATCGTGCAGACGCCCACGCTCGGGCCGATCCAGCCAACCAGGCTGGTGGAAGGCACT GGGACGGTCTCCGTGCCGATTCGCCCCACCGTGCCCGGCTACGTGGAGCCCACCGCGGTGATCACGCCGCCCACCACCA CCACCAAGAAGCCCAGAGTGTCCACTCTGAAGCCTGCCACGCCGTCCACCACGGATTCCTCCACGGCGACGACACGCAG GCCCACCCGCAGGCCCAAGACGCCCCGTCCCACGAAGCCTCCCAGCACCACCCGCTCCACGATCTCCAAGCTGACCACC GCCTCCCCGCCCACCCGCGTGCGCACCACGGCCAGCGGCGTCCCCCGGCCCTGGGAGCCAAACGAGCCGCCCAAGCTGA CGAACCACATCGACAGGGTGGACGCGTGGGAGGGGACTTACTTCGAGGTGAAAATACCCTCGGATACTTTCTACGACAA GGAGGATACCACCACTGACAAGCTGCAGCTGACCTTGAAGCTGAAGGAGCAGCAAATGATCGAGGAGAATTCGTGGGTC CAGTTCAACAGCACCAGCCAGCTCATGTACGGCATGCCGGACCGCAGCCACGTGGGGAAGCACGAGTACTTCATGTACG CCACCGACAAAGGGGGGCTGTTTGCCGTGGACGCTTTTGAAATCCACGTCCACAAACGCCCGCACGGGGACAAATCCCC GGTGAAGTTCAAGGCCAGGCTGGAAGGAGACCACAGCGCGGTGGCGAACGACATCCATAAGAAGATCATGCTGGTGAAG AAGCTGGCCCTGGCGTTCGGCGATAGGAACAGCAGCACCATCACGGTGCAGGACATCGCCAAGGGCTCCATCGTGGTGG AATGGACCAACAACACCCTGCCCCTGGAGCCCTGCCCCCGCGAGCAGATCCGGACTTTGAGCAAAAAGATCGCGGAAGA CTCCGGGGGCGCGAGCCCGGCTTTCTCCAACATCCTGCAGCCGGAGTTCAAACCTCTGAACGTGTCGGTCGTGGGCTCC GGGAGCTGCGGGCACATCCAGTTCGTCCCCGTGACGAAGGACGGCAGGGTGATCTCGGAGGCGACGCCGACGCTGGCGG CTGGGAAGGACCCCGAGAAGAGCAGTGAGGACGATGTGTACCTTCACACCGTCATCCCCGCCGTGGTGGTGGCCGCCAT CCTGCTGGTGGCCGGCATCATCGCCATGATCTGCTACCGCAAGAAGAGGAAAGGGAAGCTGACCATCGAAGACCAGGCC ACGTTCATTAAGAAGGGCGTGCCCATCATCTTCGCCGACGAGCTGGACGACTCCAAGCCCCCGCCGTCCTCCAGCATGC CCCTCATCCTGCAGGAGGAGAAAGCCCCGCTGCCCCCCCCGGAGTACCCCAACCAGAGCATGCCCGAGACCACGCCGCT CAACCAGGACACCATCGGGGAGTACACGCCGCTGCGGGACGAGGACCCCATCGCGCCGCCCTACCAGCCGCCCCCCCCC TTCACCGCTCCCATGGAGGGGAAGGGCTCCCGCCCGAAGAACATGACCCCCTACCGCTCCCCGCCGCCCTACGTCCCCC CTTAA
Citation	Javerzat S, Franco M, Herbert J, Platonova N, Peille AL, Pantesco V, De Vos J, Assou S, Bicknell R, Bikfalvi A, Hagedorn M. Correlating global gene regulation to angiogenesis in the developing chick extra-embryonic vascular system. PLoS One. 2009 Nov 17;4(11):e7856.
Copyright	Copyright Javerzat et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_001097540.1).