GEISHA - A Chicken Embryo Gene Expression Database
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DBX1
developing brain homeobox 1

Gene
Official SymbolDBX1
Official Full Namedeveloping brain homeobox 1
CGNC ID2909
also known asLEUTX, homeobox protein DBX1|leucine twenty homeobox
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_001199474
PolypeptideNP_001186403
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene422976
Ensembl GeneENSGALG00000003965
KEGGgga:422976
GEISHA IdDBX1.Ferran.2007Data SourcePublication
Complete cDNA Template Probeshow
ATGATGTTCCCCAGCCTCATCGCCCCGCCGGCCGTCTACCCGAGCCTGCTGCGGCCCACTCCCACCCTCACCTTGCCGC
AGTCGCTGCAATCCGCCTTCTCCAGCCACTCCAGCTTCCTGGTGGAAGACCTGATCCGGATCAGCCGGCCCGGCGCCTA
CCCGCCCCGCAGCGCTCCCCCGCCCAGCAGCATGTCCCCCCCGGCCTCAGCACCCAGGACGGACTCGGGGACACCGGAG
CTGCCCGGCTGCACGGCGGCCAGGAGGATCTGCTCGTCCCAAAGCTCCGGCAGTGATTCCACTTTCCTCAAGTTCGGGG
TCAACGCCATCCTGTCCTCCACCCCCCGCGCCGAGTCCTCTCCTGCCTTGCTTCAAAGCGTCCCTCCAAAGACTTTCTC
CTTCCCGTACTTTGAAGGATCCTTCCAGCCTTTCATCAGATCTTCCTATTTTCCAGCTGCCTCAGCTGTCGTGCCCATC
CCCGGCACCTTCTCATGGCCGCTGGCTGCCCGCGGTAAGCCGCGCCGTGGCATGCTGCGCCGTGCTGTCTTCTCTGATG
TGCAGCGCAAGGCACTGGAGAAGATGTTCCAGAAGCAGAAGTACATCAGCAAGCCCGACAGGAAGAAGCTGGCGGCCAA
GCTGGGCCTCAAGGACTCACAGGTGAAGATCTGGTTCCAGAACAGAAGAATGAAGTGGAGGAACTCCAAAGAAAGAGAG
CTCCTCTCCTCTGGTGGCTGCAGAGAGCAAACCCTCCCCACCAAGTTCAACCCCCACCCAGACCTCAGCGATGTTGGCA
AGAAGTGCTCAGGGGAGGAGGAGGAAGAGGACGAAGGCCCCATGGCATGCCCCCCCAGCCCCCGGCACCCGCTGCCCTA
CCACCCAGCTCCGCAGCACCTGCGGGACAGGCTGGGCCCCCAGACACCTCCCTCCCCATCACACTCCAGCAGCCCCAGC
AAACCCTCAGACTGCTCGGACTCAGAGGAAGAGGATGAGGAAGGGGAGGAAGAAGAAGAGATAACAGTCTCTTAGGTTG
CCCAGCTGCTTCTACCATCACATGGGGACATTGCAAAGGTGTACATAACAGAGGGCTATAAATTGAAGAGGTGATGTCC
CACCTACATGTCCATGTGCTTCTCCAGGGCAGGTTCCCTATCACATTGCCACAAGCCTTCCTGCTCCAGGTATTCCTGA
TTTTTCTGTCCCATGAGAAGGTTTTCACACCCATGGTGTCTGTTGACCTCTTCAAAACCATTCTTCTCTGCTTAACAAC
CAATATTTGCTCAATTAGCTTCATCAGCCTGAAAGCAAGGAGCAGACAGTTCCTTTCTTTATAGCAGGGAAATATTTTT
TCCAGACAAAACACCACCATTACCAACAAAATACAGGTGCTGTGGCCATTTTCCCACCTTCCAACCGAATTCCCAGCTA
TTACCAAGAGTTCAGAACCTGAGGATTGCTCTGATCTGGTGATCGTCTCATCCCAAGGCAAAGGATGTCCATGAGATGT
GCAGACAAACCACTGTCCCCTCCTCACCCTCACCATGCCACAGACCTGCGGGAACCACCACAATCGCCTTCAGGTATAA
CACAGTGTGCCTTGTGTAGTGGGGACCTTCTCTGTTGGTGTTTTTTTATTTAATTTACGTATCCATTCTCTAGACGCAG
CACTGTCTAACTCGCTTTTCTGCCCACAGGCCTGTGCTTGCTTTCCGCTTGGCTTCTGCTATATGCTGTGGACAGAGGA
AAGGGGATGTACCTCTTTGGTTTTGACTGAACTTTGCTGTCTTTGCACAGCTGATATGAACTGTACGCTACTTTGTACA
CTTACTCTGTATGGATGTTTTATACCAAGGTTATTGTGAAAGACTATAACAATGGCTGAATAAGGTTTCTTTTTTTTTT
AATTAAATGATGGCTGAACTACGAACAAATGTAGCTGTTTAAATGTGTAACTTATAAAGAAACACTTTTATTTTGTATT
TTACCATGTACAGACTTTAAATATGTGTATATATAATAAAATGAATGACTGCCAAATAAATGAATGTAGATTTC
CitationFerran JL, Sánchez-Arrones L, Sandoval JE, Puelles L. A model of early molecular regionalization in the chicken embryonic pretectum. J Comp Neurol. 2007 Dec 1;505(4):379-403.
CopyrightCopyright © 1999–2012 John Wiley & Sons, Inc. All Rights Reserved.
CommentsPrimers are given in the methods. Sequence below was obtained from NCBI (Acc. # NM_001199474.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
stage 17
stage 17
stage 17
stage 18
stage 18
Diencephalon
Mesencephalon
 
19-23
stage 23
stage 23
stage 23
stage 23
Diencephalon
Mesencephalon
ABB, alar basal boundary
Double labeled: PAX3, immunostained; DBX1, in situ hybridized.
JcP, juxtacommissural pretectum

Mouse

Emage
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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