GEISHA - A Chicken Embryo Gene Expression Database
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DDX27
DEAD-box helicase 27

Gene
Official SymbolDDX27
Official Full NameDEAD-box helicase 27
CGNC ID5262
also known asprobable ATP-dependent RNA helicase DDX27|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_001006293
PolypeptideNP_001006293
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly44087FBgn0021995
Human55661ENSG00000124228
Mouse228889ENSMUSG00000017999All phenotypic alleles (2):Targeted, other(2) MGI:2385884
Xenopus100101759, 734505923337
Zebrafish378844ENSDARG00000091831ZDB-GENE-031001-8ZFIN:ZDB-GENE-031001-8
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene419308
Ensembl GeneENSGALG00000006974
KEGGgga:419308

Entry 1

GEISHA IdP38Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GCAGACAATGCTTTTCTCTGCCACAATGACAGAGGAGGTGAAAGATTTGGCTTCTGTTTCCCTGAAGAATCCCACCCGA
ATTTTTGTGAACAGCAACACAGATGTTGCCCCTTTCCTGAGGCAGGAATTCATCCGGATCAGACCCAACCGAGAGGGAG
ACCGTGAGGCCATTGTGTCGGCTCTACTGACACGGACCTTCCCAGATCATGTGATGCTTTTCACCCAGACAAAGAAGCA
AGCTCATCGTATGCACATCCTGCTTGGGTTGATGGGTCTGCGGGTTGGGGAGCTTCATGGGAACCTCTCCCAGGCACAG
CGGCTGGAGGCACTGAGGCGTTTTAAGGATGAGCAGATTGATATTTTGGTAGCTACAGATGTGGCTGCACGAGGACTTG
ACATAGAAGGTGTTAAAACAGTAATCAATTTTACCATGCCCAATACCACCAAACACTACGTCCATCGAGTGGGTCGAAC
AGCAAGAGCAGGTAGGGCTGGTCGCTCGGTTTCACTCGTGGGTGAGGAAGAGCGGAAGATGCTGAAGGAGATTGTGAAG
GCTGCCAAAACACCAGTGAAAGCCAGAATCCTCCCCCAAGATGTCATACTAAAATTCCGAGAAAAGATTGAGAATCTGG
AAAAAGACGTGTATGCAGTTCTGTGCCTGGAGCGTGAGGAGCGTGAAATGCAGCAGTCAGAAGCCCAGATCAATAAGGC
AAAGAAGCAGTTGGAGGAAGGAAAACAGGAGGCTGCAACCAAGGGTGTAGAGCGGAGCTGGTTCCAGACCCGTGAGGAG
AGGAAGAAAGAGAAAATTGGCTAAAGCTCTGCAGGAGTTTGACCTCGCGTTACGGGGCAAAAAGAAAAGGAAGAAATTT
ATGCAGGACACACAGAGAAAAGCCCAAATGACACCAGAGGAGAGGTCACAGTTTGAAATCTTGAAATCTCAAATGTACG
CTGAGCGGCTGGCAAAAAGAAATCGGCGAGTGAAGCGAGCCCGAGCTTTGCCAGAAGAGGAACCAGCAGCAGCACCAAA
AGGCCCCAAGCGGAAGAAAAAGGTGTCTGTGTTTGATGAAGAGCTTACCAACACAAGCAGGAAGGCGCTGAAGCAGTAC
CGTGCAGGTCCATCGTTTGAGGATCGGAAACGCTTGGGTATGGCCCAGCGTAGGAAAGGAGGAAACTTTAAATCCAAGT
CCAGGTACAAGAGGAAGTAAGAACTGTTTTACCAAGTGGGGAATGTGGGCTATCTGCCCACTTCAGACTTCTCCCAGTG
TAAAGAAATCCAGGCCCTGGAGAGGAGATATATTCAGTAAAACTGAATAGATGTTCATCAAGTCTCAGAATAGCTTTGG
GCTGTTCATGTATAGATGTTTGAACACTGAAAATATCTTCAGCCAATATAATAAATTTTCTAAAAACCCAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 6
Area Pellucida
 
7-12
stage 11
stage 11
Intermediate Mesoderm
 
13-18
stage 16
Limb Buds
Somites
Widespread Expression
 
19-23
stage 21
stage 23
Allantois
Face Mesenchyme
Limb Buds
Pharyngeal Arches and Clefts
Somites
Surface Ectoderm
Widespread Expression
not AER

Entry 2

GEISHA IdDDX27.Bell.2004Data SourcePublication
Complete cDNA Template Probeshow
GCAGACAATGCTTTTCTCTGCCACAATGACAGAGGAGGTGAAAGATTTGGCTTCTGTTTCCCTGAAGAATCCCACCCGA
ATTTTTGTGAACAGCAACACAGATGTTGCCCCTTTCCTGAGGCAGGAATTCATCCGGATCAGACCCAACCGAGAGGGAG
ACCGTGAGGCCATTGTGTCGGCTCTACTGACACGGACCTTCCCAGATCATGTGATGCTTTTCACCCAGACAAAGAAGCA
AGCTCATCGTATGCACATCCTGCTTGGGTTGATGGGTCTGCGGGTTGGGGAGCTTCATGGGAACCTCTCCCAGGCACAG
CGGCTGGAGGCACTGAGGCGTTTTAAGGATGAGCAGATTGATATTTTGGTAGCTACAGATGTGGCTGCACGAGGACTTG
ACATAGAAGGTGTTAAAACAGTAATCAATTTTACCATGCCCAATACCACCAAACACTACGTCCATCGAGTGGGTCGAAC
AGCAAGAGCAGGTAGGGCTGGTCGCTCGGTTTCACTCGTGGGTGAGGAAGAGCGGAAGATGCTGAAGGAGATTGTGAAG
GCTGCCAAAACACCAGTGAAAGCCAGAATCCTCCCCCAAGATGTCATACTAAAATTCCGAGAAAAGATTGAGAATCTGG
AAAAAGACGTGTATGCAGTTCTGTGCCTGGAGCGTGAGGAGCGTGAAATGCAGCAGTCAGAAGCCCAGATCAATAAGGC
AAAGAAGCAGTTGGAGGAAGGAAAACAGGAGGCTGCAACCAAGGGTGTAGAGCGGAGCTGGTTCCAGACCCGTGAGGAG
AGGAAGAAAGAGAAAATTGGCTAAAGCTCTGCAGGAGTTTGACCTCGCGTTACGGGGCAAAAAGAAAAGGAAGAAATTT
ATGCAGGACACACAGAGAAAAGCCCAAATGACACCAGAGGAGAGGTCACAGTTTGAAATCTTGAAATCTCAAATGTACG
CTGAGCGGCTGGCAAAAAGAAATCGGCGAGTGAAGCGAGCCCGAGCTTTGCCAGAAGAGGAACCAGCAGCAGCACCAAA
AGGCCCCAAGCGGAAGAAAAAGGTGTCTGTGTTTGATGAAGAGCTTACCAACACAAGCAGGAAGGCGCTGAAGCAGTAC
CGTGCAGGTCCATCGTTTGAGGATCGGAAACGCTTGGGTATGGCCCAGCGTAGGAAAGGAGGAAACTTTAAATCCAAGT
CCAGGTACAAGAGGAAGTAAGAACTGTTTTACCAAGTGGGGAATGTGGGCTATCTGCCCACTTCAGACTTCTCCCAGTG
TAAAGAAATCCAGGCCCTGGAGAGGAGATATATTCAGTAAAACTGAATAGATGTTCATCAAGTCTCAGAATAGCTTTGG
GCTGTTCATGTATAGATGTTTGAACACTGAAAATATCTTCAGCCAATATAATAAATTTTCTAAAAACCCAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA
CitationBell GW, Yatskievych TA, Antin PB. GEISHA, a whole-mount in situ hybridization gene expression screen in chicken embryos. Dev Dyn. 2004 Mar;229(3):677-87.
CopyrightCopyright © 2004 Wiley-Liss, Inc.
CommentsThe probe sequence below was obtained from the GEISHA database using information provided in the publication, Geisha P38.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 11
stage 11
Lateral Plate Mesoderm
 

Mouse

EmageMGI:2385884
MGI GXDMGI:2385884

Frog

Xenbase923337

Fruit Fly

BDGPFBgn0021995

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-031001-8
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