GEISHA - A Chicken Embryo Gene Expression Database
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DLX5
distal-less homeobox 5

Gene
Official SymbolDLX5
Official Full Namedistal-less homeobox 5
CGNC ID48983
also known ashomeobox protein DLX-5|cDlx|distal-less homeo box 5, Homeobox protein DLX-5 , cDlx, Distal-less 5
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204159
PolypeptideNP_989490
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.919
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human1749ENSG00000105880MIM:600028
Mouse13395ENSMUSG00000029755MGI:101926
Xenopus447997, 399265853056
Zebrafish30569ENSDARG00000042296ZDB-GENE-990415-49ZFIN:ZDB-GENE-990415-49
Gene Ontology
Molecular FunctionHMG box domain binding, RNA polymerase II core promoter proximal region sequence-specific DNA binding, more...RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
Biological Processanatomical structure formation involved in morphogenesis, axon guidance, BMP signaling pathway, more...cell proliferation, cellular response to BMP stimulus, embryonic limb morphogenesis, endochondral ossification, epithelial cell differentiation, face morphogenesis, inner ear morphogenesis, olfactory pit development, osteoblast differentiation, palate development, positive regulation of canonical Wnt signaling pathway, positive regulation of epithelial cell proliferation, positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus
Cellular Componentcytoplasm, nuclear chromatin
Links to other databases
Entrez Gene373969
Ensembl Gene
KEGGgga:373969

Entry 1

GEISHA IdDlx5.Bhattacharyya.2004Data SourcePublication
Complete cDNA Template Probeshow
GGGCGCCGAGCCGCCTCCCCCGGCCATGTCCGCCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGG
TCCCCGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCC
CACTTTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCT
ACCTCGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCG
CCAAAGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGAGCCTACGGCCGCGGGCAAAGCTCCGC
GGGGCAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGG
ACTATTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGG
CCGAGCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAA
GATCATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCG
CCGGCGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGT
CCCCCGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGG
CTCCCTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGTGCTTCTTTTGTATTCCGC
TCCCTGGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAA
CAAACAAACGACGACGACAACGACAAACAAACAAACAAACAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTT
ATTGCATTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTC
AAATCTATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAAT
TAAACTGTATATTCTGAATAAAATAAAATTATTTCGACC
CitationBhattacharyya S, Bailey AP, Bronner-Fraser M, Streit A. Segregation of lens and olfactory precursors from a common territory: cell sorting and reciprocity of Dlx5 and Pax6 expression. Dev Biol. 2004 Jul 15;271(2):403-14.
CopyrightReprinted from Developmental Biology, Volume 271, Issue 2, Sujata Bhattacharyya, Andrew P. Bailey, Marianne Bronner-Fraser, and Andrea Streit, Segregation of lens and olfactory precursors from a common territory: cell sorting and reciprocity of Dlx5 and Pax6 expression, Pages 403-414, Copyright 2004, with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved.
CommentsAuthors indicated the probe came from cDNAs for Dlx-5 Ferrari et al., 1995 who said:Dlx-5 is Acc# U25274.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 7
stage 7
stage 7
stage 10
stage 10
Lens
Nasal Placcode/Nerve
Neural Plate/Tube
Surface Ectoderm
 

Entry 2

GEISHA IdDlx5.Zhu.2006Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationZhu H, Bendall AJ. Dlx3 is expressed in the ventral forebrain of chicken embryos: implications for the evolution of the Dlx gene family. Int J Dev Biol. 2006;50(1):71-5.
Copyright"Reprinted from Int. J. Dev. Biol. Copyright © 2007 UBC Press". All rights reserved.
CommentsAccording to authors , "Antisense chicken Dlx5 riboprobe was synthesized with T7 RNA polymerase from a pBluescriptSK-Dlx5 template linearized with BamHI (ref)" As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204159).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-29
stage 27
stage 27
stage 28
stage 29
stage 29
Diencephalon
Heart
Pharyngeal Arches and Clefts
Telencephalon
Hypothalamus
Sub-ventricular zone
Ventral thalamus

Entry 3

GEISHA IdDlx5.Bendall.2003Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationBendall AJ, Hu G, Levi G, Abate-Shen C. Dlx5 regulates chondrocyte differentiation at multiple stages. Int J Dev Biol. 2003 Jun;47(5):335-44.
Copyright"Reprinted from Int. J. Dev. Biol., 47, Bendall AJ, Hu G, Levi G, Dlx5 regulates chondrocyte differentiation at multiple stages, 335-44, Copyright (2003), with permission from Copyright © 2003 UBC Press". All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_204159).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
Unlabeled
 
25-30
stage 26
Wing
Wing Bones
 
31-44
stage 32
stage 38
stage 44
Wing
Wing Bones
Comparison with other genes
Perichondrium

Entry 4

GEISHA IdDlx5.Holleville.2007Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationHolleville N, Matéos S, Bontoux M, Bollerot K, Monsoro-Burq AH. Dlx5 drives Runx2 expression and osteogenic differentiation in developing cranial suture mesenchyme. Dev Biol. 2007 Apr 15;304(2):860-74.
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204159.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 30
stage 30
Face Mesenchyme
 
31-38
stage 38
stage 38
stage 38
Face Mesenchyme
 

Entry 5

GEISHA IdDlx5.Bendall.2004Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CommentsInsufficient information given in the paper to determine the probe. This sequence taken from NCBI Acc.# NM_204159.1.
no images

Entry 6

GEISHA IdDLX5.Streit.2002Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationStreit, A. Extensive cell movements accompany formation of the otic placode. 2002 DEVELOPMENTAL BIOLOGY 249(2), 237-54.
Copyright"Reprinted from Developmental Biology, 249(2), Streit A., Extensive cell movements accompany formation of the otic placode, 237-54, Copyright (2002), with permission from Elsevier". Copyright © (2002) Elsevier B.V. All rights reserved.
CommentsAccording to the authors, "cDNAs ... were kind gifts (see txt for refs)." As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence was obtained from NCBI (acc# NM_204159).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 6
stage 6
stage 6
stage 6
stage 6
stage 6
Epiblast
Headfold
Neural Plate/Tube
Surface Ectoderm
double labeled
7-12
stage 7
stage 8
stage 8
stage 8
stage 8
stage 8
Headfold
Lateral Plate Mesoderm
Neural Crest
Surface Ectoderm
double label
31-44
stage 44
stage 44
stage 44
  

Entry 7

GEISHA IdDLX5.McLarren.2003Data SourcePublication
Complete cDNA Template Probeshow
GCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGGCGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGG
CCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCCCGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCC
GCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCCCTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCT
ACTGAGGGCCGAA
CitationMcLarren KW, Litsiou A, Streit A. DLX5 positions the neural crest and preplacode region at the border of the neural plate. Dev Biol. 2003 Jul 1;259(1):34-47.
CopyrightCopyright © 2003 Elsevier Science (USA). All rights reserved.
CommentsThe sequence below was obtained from NCBI (NM_204159) using the information provided in the publication.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-8
stage 8
stage 8
Ectoderm
Neural Plate/Tube
Neural folds

Entry 8

GEISHA IdDLX5.Holleville.2003Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationHolleville N, Quilhac A, Bontoux M, Monsoro-Burq AH. BMP signals regulate Dlx5 during early avian skull development. Dev Biol. 2003 May 1;257(1):177-89.
CopyrightCopyright © 2003 Elsevier Science (USA) All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204159).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-42
stage 35
stage 35
stage 35
stage 38
stage 38
stage 38
stage 38
stage 38
stage 38
stage 42
stage 42
Head Mesenchyme
Bone Blastemas
Skull

Entry 9

GEISHA IdDLX5.Riley.2003Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationRiley BB, Phillips BT. Ringing in the new ear: resolution of cell interactions in otic development. Dev Biol. 2003 Sep 15;261(2):289-312. Review.
CopyrightCopyright © 2003 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204159).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Early Embryo
Ectoderm
Headfold
Medial Preplacodal Domain

Entry 10

GEISHA IdDLX5.Khudyakov.2009Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationKhudyakov J, Bronner-Fraser M. Comprehensive spatiotemporal analysis of early chick neural crest network genes. Dev Dyn. 2009 Mar;238(3):716-23.
CopyrightPublished Online: 22 Feb 2009 Copyright © 2009 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204159).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
stage 4
stage 5
stage 6
Ectoderm
Placcode
Neural plate border
Non-neural ectoderm
Preplacodal region
7-10
stage 7
stage 7
stage 8
stage 9
stage 10
stage 10
Ectoderm
Endoderm
Nasal Placcode/Nerve
Non-neural ectoderm

Entry 11

GEISHA IdDLX5.Bhattacharyya.2008Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204159).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 11
stage 11
stage 11
Ear/Otic Placcode
Ectoderm
Nasal Placcode/Nerve
Neural Crest
Neural Plate/Tube
Anterior ectoderm
Anterior neural folds
Dorsal neural tube
Emigrating neural crest
Olfactory precursors
13-18
stage 15
stage 15
Ectoderm
Nasal Placcode/Nerve
Neural Crest
Olfactory placodes
19-20
stage 19
stage 20
Cranial Ganglion
Ear/Otic Placcode
Nasal Placcode/Nerve
Pharyngeal Arches and Clefts
 

Entry 12

GEISHA IdDLX5.Bailey.2006Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationBailey AP, Bhattacharyya S, Bronner-Fraser M, Streit A. Lens specification is the ground state of all sensory placodes, from which FGF promotes olfactory identity. Dev Cell. 2006 Oct;11(4):505-17.
CopyrightCopyright © 2006, Elsevier
CommentsInsufficient information provided in publication to verify exact sequence to synthesize probe. Sequence below was obtained from NCBI (NM_204159).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Area Opaca
Early Embryo
 
7-12
stage 10
Ectoderm
Nasal Placcode/Nerve
presumptive olfactory ectoderm
19-20
stage 20
  

Entry 13

GEISHA IdDLX5.Basch.2006Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationBasch ML, Bronner-Fraser M, García-Castro MI. Specification of the neural crest occurs during gastrulation and requires Pax7. Nature. 2006 May 11;441(7090):218-22.
CopyrightCopyright © 2006, Nature Publishing Group
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-5
stage 4
stage 5
stage 5
Placode
double labeled

Entry 14

GEISHA IdDLX5.Paxton.2010Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationPaxton CN, Bleyl SB, Chapman SC, Schoenwolf GC. Identification of differentially expressed genes in early inner ear development. Gene Expr Patterns. 2010 Jan;10(1):31-43. Epub 2009 Nov 11.
Copyright 2009 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204159).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 5
Early Mesoderm
Epiblast
Neural Plate/Tube
Primitive Streak
 
7-11
stage 7
stage 7
stage 8
stage 11
Anterior Intestinal Portal
Ear/Otic Placode
Ectoderm
Endoderm
Head Mesenchyme
Mesoderm
Neural Plate/Tube
Primitive Streak
Tail
 

Entry 15

GEISHA IdDLX5.Gibson.2011Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationGibson A, Robinson N, Streit A, Sheng G, Stern CD. Regulation of programmed cell death during neural induction in the chick embryo.Int J Dev Biol. 2011;55(1):33-43.
Copyright"Reprinted from Int. J. Dev. Biol., 55(1), Copyright (2011), with permission from the authors and IJDB, Copyright © 2002 UBC Press". All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204159).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4
stage 4
stage 4
Epiblast
Germinal Crescent
STAGE 4+

Entry 16

GEISHA IdDLX5.SzaboRogers.2009Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationSzabo-Rogers HL, Geetha-Loganathan P, Whiting CJ, Nimmagadda S, Fu K, Richman JM. Novel skeletogenic patterning roles for the olfactory pit. Development. 2009 Jan;136(2):219-29. Epub 2008 Dec 4.
CopyrightPublished by The Company of Biologists 2009. This material is protected by a copyright retained by the authors. Permission requested from Dr. Richman.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204159.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 15
stage 15
stage 15
Ear/Otic Placode
Face Mesenchyme
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
C' and right side show normal expression
19-20
stage 20
stage 20
stage 20
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
D' and right side show normal expression

Entry 17

GEISHA IdDLX5.Acloque.2011Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationHervé Acloque, Oscar H. Ocaña, Ander Matheu, Karine Rizzoti, Clare Wise, Robin Lovell-Badge, M. Angela Nieto Reciprocal Repression between Sox3 and Snail Transcription Factors Defines Embryonic Territories at Gastrulation. Dev Cell. 2011 September 13; 21(3): 546–558.
CopyrightCopyright © 2011 Published by Elsevier Inc.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204159.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
stage 3
Epiblast
 

Entry 18

GEISHA IdDLX5.Sanchez-Arrones.2012Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationSanchez-Arrones L, Stern CD, Bovolenta P, Puelles L. Sharpening of the anterior neural border in the chick by rostral endoderm signaling. Development. 2012 Mar;139(5):1034-44.
CopyrightPublished by The Company of Biologists © 2012.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204995.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
stage 6
stage 6
stage 6
Epiblast
DLX5(purple)
SIX3(brown)
control embryo
double-labeled in situ:

Entry 19

GEISHA IdDLX5.Bardet.2008Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationBardet SM, Martinez-de-la-Torre M, Northcutt RG, Rubenstein JL, Puelles L. Conserved pattern of OTP-positive cells in the paraventricular nucleus and other hypothalamic sites of tetrapods. Brain Res Bull. 2008 Mar 18;75(2-4):231-5. Epub 2007 Nov 20.
CopyrightCopyright © 2012 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204159.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-34
stage 31
stage 34
stage 34
stage 34
stage 34
Forebrain
 

Entry 20

GEISHA IdDLX5.Ferrari.2006Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationFerrari D, Kosher RA. Expression of Dlx5 and Dlx6 during specification of the elbow joint. Int J Dev Biol. 2006;50(8):709-13.
Copyright© UBC Press
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204159.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
stage 24
stage 24
stage 24
Wing
 
25-26
stage 25
stage 25
stage 25
stage 26
stage 26
Wing
 

Entry 21

GEISHA IdcDLX5.Adamska.2001Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationAdamska M, Herbrand H, Adamski M, Krüger M, Braun T, Bober E. FGFs control the patterning of the inner ear but are not able to induce the full ear program. Mech Dev. 2001 Dec;109(2):303-13.
CopyrightCopyright © 2001 Elsevier Science Ireland Ltd.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_204159.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 15
stage 15
Ear/Otic Placode
Pharyngeal Arches and Clefts
 
31-44
stage 44
  

Entry 22

GEISHA IdDlx‐5.Ferrari.1999Data SourcePublication
Complete cDNA Template Probeshow
CCATGGCCTGCAACTCCCCGCAGTCGCCGGCGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCA
CGGGCACCCGCCCGCCGCCAACCCGTCCCCCGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCC
CTCGGCTCCCACCTGCAGCCCCACGGCTCCCTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGA
ACCCTCGTGCTTCTTTTGTATTCCGCTCCCTGGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGA
TGGGGGATTTTTAAAGGGAAACGAAACAAACAAACGACGACGACAACGACAAACAAACAAACAAACAAAAAAGGTTAAA
ATGTGTAAAGCTTGTGCATGTAACTTATTGCATTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAG
CTGTGGACACTGTCAATGGTGCCTTCAAATCTATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCC
TTGTAAATAATTGTAGATAGAGGAATTAAACTGTATATTCTGAATAAAATAAAATTATTTCGACC
CitationFerrari D, Harrington A, Dealy CN, Kosher RA. Dlx-5 in limb initiation in the chick embryo. Dev Dyn. 1999 Sep;216(1):10-5.
CopyrightCopyright © 1999 WILEY-LISS, INC.
CommentsThe complete cDNA template sequence was obtained from the information in the publication as described in Ferrari et al. 1999.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 10
stage 10
Intermediate Mesoderm
Lateral Plate Mesoderm
Leg Ectoderm
Somites
Surface Ectoderm
Wing Ectoderm
flank ectoderm
13-18
stage 14
stage 15
stage 15
stage 15
stage 16
stage 18
stage 18
Leg Ectoderm
Limb Buds
Wing AER
Wing Ectoderm
 
19-21
stage 21
Wing AER
Wing Ectoderm
 
all
 
 
 
 
  

Entry 23

GEISHA IdDLX5.Anderson.2020Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CommentsImages provided by Claire Anderson. As insufficient information was provided to verify sequence used to synthesize probe, the sequence was obtained from NCBI (accession number: NM_204159). Related paper: Nat Commun. 2016 7:12656. doi: 10.1038/ncomms12656. A strategy to discover new organizers identifies a putative heart organizer. Anderson C, et al. PMID:27557800.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XII
Unlabeled
stage EGK XII+
1-3
stage 3
Epiblast
Primitive Streak
 
4-6
stage 4
stage 4
stage 5
stage 6
Early Mesoderm
Ectoderm
Epiblast
Headfold
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
stage 4+
7-12
stage 7
stage 8
stage 8
stage 8
stage 9
stage 11
stage 11
stage 12
stage 12
Anterior Neuropore
Ear/Otic Placode
Ectoderm
Eye
Forebrain
Headfold
Lateral Plate Mesoderm
Nasal Placode/Nerve
Neural Crest
Neural Plate/Tube
Notochord
Primitive Streak
Tail
extraembryonic ectoderm
8b
Section 4
olfactory placode precursor
stage 12+
stage 8+
stage 8-
13-18
stage 14
stage 14
Ear/Otic Placode
Ectoderm
Head Mesenchyme
Nasal Placode/Nerve
Neural Crest
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Tail
stage 14+
19-24
stage 21
stage 24
Ear/Otic Placode
Head Mesenchyme
Leg Mesenchyme
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Tail
Wing Mesenchyme
 

Entry 24

GEISHA IdDLX5.Freter.2012Data SourcePublication
Complete cDNA Template Probeshow
CGCCGACCGCCTCCCCCGGCCATGTCCGNCTGAGCCCGGCGATCCGCGCTATGACAGCAGTGTTTGACAGAAGGGTCCC
CGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCACCCGTCCCAGGAATCTCCCACT
TTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCGCACGGCTACTGCTCGCCTACCT
CGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCTCCGCCGGCACCTACCCCGCCAA
AGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGGCCGCGGGCAAAGCTCCGCGGGG
CAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAGAAAGTGCGCAAACCGCGGACTA
TTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACCTCGCCCTGCCCGAGCGGGCCGA
GCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAAAAGGTCCAAGATCAAGAAGATC
ATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCCTGCAACTCCCCGCAGTCGCCGG
CGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACCCGCCCGCCGCCAACCCGTCCCC
CGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTCCCACCTGCAGCCCCACGGCTCC
CTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGNGCTTCTTTGTATTCCGCTCCCT
GGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGATTTTTAAAGGGAAACGAAACAAAC
AAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAGGTTAAAATGTGTAAAGCTTGTGCATGTAACTTATTGCA
TTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTCGGCTCAGCTGTGGACACTGTCAATGGTGCCTTCAAATCT
ATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAATAATTGTAGATAGAGGAATTAAACT
GTATTTCTGAATAAAATAAAATTATTTCGNCCNAAAAAAAAAAAAAAAAAA
CitationFreter S, Muta Y, O'Neill P, Vassilev VS, Kuraku S, Ladher RK. Pax2 modulates proliferation during specification of the otic and epibranchial placodes. Dev Dyn. 2012 Nov;241(11):1716-28
CopyrightCopyright © 2012 Wiley Periodicals, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_204159.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-14
stage 14
stage 14
stage 14
Cranial Nerve
Ear/Otic Placode
control = left side of embryo
control = left side of embryo
cross section of figure 4J;
neuroblast
stage 13/14, 16 to 22 somites;
all
 
 
  

Entry 25

GEISHA IdDLX5.Brown.2005Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
AGCAGTCTGCCGCAGCCGCCGCGCCGAGCCGCCTCCCCCGGCCATGTCCGCCTGAGCCCGGCGATCCGCGCTATGACAG
CAGTGTTTGACAGAAGGGTCCCCGGCATCAGGTCCTCCGACTTCCAGCCGCCTTTCCAGAGCGCCGCAGCCATGCACCA
CCCGTCCCAGGAATCTCCCACTTTACCCGAGTCCTCGGCTACGGATTCCGACTACTACAGCCCGACGGGGGCGGCCCCG
CACGGCTACTGCTCGCCTACCTCGGCTTCCTACGGCAAAGCGCTCAACCCCTACCAGTACCAGTACGGCATGAACGGCT
CCGCCGGCACCTACCCCGCCAAAGCCTACGCGGACTACGGCTACGGCAGCCCCTACCACCAGTACGGAGGCGCCTACGG
CCGCGGGCAAAGCTCCGCGGGGCAGCCAGAGAAGGAGGTGGCGGAGCCCGAGGTGAGGATGGTGAACGGCAAGCCAAAG
AAAGTGCGCAAACCGCGGACTATTTATTCCAGCTTTCAGCTGGCGGCGTTGCAGAGGAGGTTCCAGAAGACCCAATACC
TCGCCCTGCCCGAGCGGGCCGAGCTGGCCGCCTCGCTGGGACTCACGCAGACGCAGGTGAAAATCTGGTTCCAGAACAA
AAGGTCCAAGATCAAGAAGATCATGAAGAACGGGGAGATGCCCCCGGAGCACAGCCCCAGCTCCAGCGACCCCATGGCC
TGCAACTCCCCGCAGTCGCCGGCGGTGTGGGAACCTCAGGGCTCGTCGCGCTCCCTCGGCCACCACGGGCACGGGCACC
CGCCCGCCGCCAACCCGTCCCCCGGCAGCTACCTGGAGAGCCCCTCGGCCTGGTACCCCGCCGCCAGCCCCCTCGGCTC
CCACCTGCAGCCCCACGGCTCCCTACAGCATCCCTTGGCGCTGCCCTCCGGGACGATCTACTGAGGGCCGAACCCTCGT
GCTTCTTTTGTATTCCGCTCCCTGGACTCCTGTGTTTTACTGTTAAGGAAGAATAACGAAAGGAATGCGGATGGGGGAT
TTTTAAAGGGAAACGAAACAAACAAACGACGACGACAACGACAAACAAACAAACAAAAAAAAAAGGTTAAAATGTGTAA
AGCTTGTGCATGTAACTTATTGCATTTCAAAGGAACCCTTTTTTATACCGTGCGGACGTTTTTTCGGCTCAGCTGTGGA
CACTGTCAATGGTGCCTTCAAATCTATGACCTCAACTTTTCCAGAGACTTTTTTTCAATGTTATTTTAACCCTTGTAAA
TAATTGTAGATAGAGGAATTAAACTGTATATTCTGAATAAAATAAAATTATTTCG
CitationStephen T Brown 1, Juemei Wang, Andrew K Groves. Dlx gene expression during chick inner ear development. J Comp Neurol. 2005 Feb 28;483(1):48-65.0
Copyright© 2005 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_204159.2).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Neural Plate/Tube
ANPB: anterior neural plate border
asterisk indicates presumptive otic placode
7-12
stage 8
stage 12
Ear/Otic Placode
Neural Plate/Tube
ANPB: anterior neural plate border
13-18
stage 15
stage 16
Ear/Otic Placode
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
 
19-24
stage 22
stage 24
Ear/Otic Placode
 
25-30
stage 30
stage 30
stage 30
stage 30
stage 30
stage 30
stage 30
Ear/Otic Placode
SSC, superior semicircular canal; sc, superior crista
ed, endolymphatic duct; lsc, lateral semicircular canal; ssc, superior semicircular canal
lg, lagena macula
psc, posterior semicircular canal; pc, posterior crista
31-34
stage 34
stage 34
stage 34
Ear/Otic Placode
lc, lateral crista
pc, posterior crista
sc, superior crista
all
 
 
 
 
 
 
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.919

Mouse

EmageMGI:101926
EurexpressMGI:101926
MGI GXDMGI:101926

Frog

Xenbase853056

Fruit Fly

BDGP

Zebra Finch

ZEBrADLX5

Zebrafish

ZFINZDB-GENE-990415-49
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