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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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DMRT3
doublesex and mab-3 related transcription factor 3

Gene

Official Symbol	DMRT3
Official Full Name	doublesex and mab-3 related transcription factor 3
CGNC ID	7725
also known as	doublesex- and mab-3-related transcription factor 3
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_429193
Polypeptide	XP_429193
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.28055

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	58524	ENSG00000064218		MIM:614754
Mouse	240590	ENSMUSG00000042372	All phenotypic alleles (2):Targeted, knock-out(2)	MGI:2449470
Xenopus	100495546			995120
Zebrafish	450035, 286780	ENSDARG00000035290	ZDB-GENE-021220-3, ZDB-GENE-021220-5	ZFIN:ZDB-GENE-021220-3, ZFIN:ZDB-GENE-021220-5

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	431641
Ensembl Gene	ENSGALG00000010161
KEGG	gga:431641

Entry 1

GEISHA Id	DMRT3.Smith.2002	Data Source	Publication
Complete cDNA Template Probe	show ATGAACGGCTACGGCTCCCCGTACCTCTACATGGGCGGCCCCGTGTCGCAGCCGCCACGGGCGCCGCTGCAACGGACGC CCAAGTGCGCCCGGTGCCGCAACCACGGCGTGCTGTCCTGGCTGAAGGGCCACAAGCGCTACTGCCGCTTCAAGGACTG CACCTGCGAGAAGTGCATCCTCATCATCGAGCGGCAGCGGGTGATGGCCGCGCAGGTGGCCCTGCGCCGTCAGCAGGCC AACGAGAGCCTGGAGAGCCTCCTCCCGGACTCGCTGCGCTCCCTCCCGGGGCCGCCGGGCAGCGCCGAGCCCTCCGCCG CCCCTCCGGGGCCGCCGCCCTGTGCCGGGCCGCAGCGGGCCCCCGCTGAGCTGGCAGCCGCCGCCGCGCTGCGCTGGGC CACCGAGCCGCCCCCCGCGCTGCTGGGGCCGCTCCCCAAGGCAGACATCAATGAGGAGCGGCTAGGTGATGCCAGTGGA ACAGACAATGCCGAGACCTACAGTGACAAAGACACAGACCAAAGGAGTTCCCCAGACATGACTAAAGCCAAAACCTGCT TCACCCCTGAAAGCCCAGAAATTGTATCAGTGGATGAAGTTGGTTATGCAGTTCAGAAAAATGGTGGCAGCACAGAGAG CCGTCCAGAGAGCCCCAAGTACCATGCAGAGCAGAACCACCTGCTGATAGAAGGTCCTTCTGGGACAGTTTCTTTACCT TTCAGCTTGAAAGCCAACAGACCTCCACTGGAAGTGCTGAAAAAGATTTTCCCTAACCAGAAGCCGACTGTGCTGGAGT TGATCCTGAAGGGATGTGGTGGTGACCTGGTGGGCGCTGTTGAGGTTCTCTTGTCCAGTCGGTCTTCAGTGGCCGGTGG GGAGAGAACTTCAGAGTCAGATGGTCTAGTTCTGCCTTCCAATGGGCACATTTTTGAACACACGCTGAGTTCCTATCCT ATTTCCTCTTCCAAGTGGTCTGTGGGATCGGCCTTCAGGGTGCCCGACACGCTGAGGTTCTCTGCTGACTCCAGCAATG TTGTGCCCAATCCTCTGGCCGTACCTTTGCAGCACCCGTTCCCTCAGCCACCTCGCTACCCGCTGATGCTGAGGAACAC ACTGGCAAGAAACCAGTCCAGTCCTTTCCTGCCTAATGACGTCACCCTGTGGAACACCATGACACTGCAGCAGCAGTAC CAGCTGCGGTCCCAGTATGTCAGTCCTTTCTCTAGCAACTCAGCCAGCGTCTTCCGAAGCTCTCCTGTCCTTCCTTCTC GCTCCTCGGAAGATCCTAGGATCTCAATCCCTGATGACGGATGTCCTATTGTGTCTAAGCAACCTCTTTACACAGAAGA TGAGTATGACGAAAGGTCTGATTCTTCAGACTCAAGAATACTCAACACATCTTCATAGAATGACATTTGGCATACGATA AGTGATATTTGCAGTGCAGCTGAACTACTGGGCCTGAAGAGGAGAGATGTATACTCTATGAAACCCTTGCAATTGTACT AAAACGTGACTTTGCTTGGTATTGTACTATAGCAATAAAGACATAACCTATTTAATTTCTTGCACTTCATTGGATAATG CCAAATAGCAATACTCTGGCTTTAGCTCTGAGTGTGTACTACAAAGAAAGACTTTACGGCCGTCGGTTACGGGACTCTG GAAGATTCGTAGCGGAAACTGAAGCTCAAGGTCTACTTTGTTCCTTAACTCAGACAACTGGGGATATTAAACTAGAATA CTTGAATGCTGTTTTATAAGAGAGAACTCCTCAGGACATAAGAAATCAAACAAAAGTAGTTCAATTGCAAATGGACTAA AACAAGGACCAGTCATCATCTTTACATTGAAAGAAAAGGCAGAAGAATTATGCACATGGAAATAGCATGAACTGCTTCT GTACTATTTGAGCTTGGACACTTTTTAGAGAAATAATCTTACGAGTTATTCTTTTCCCATGGCTAGGTCGAAACGTGTA ATGTCAGTGTAAAACCAATTACAGCTGTGAATTGCATGAAGTGTATTGTGAAATGAACACAAGATTAAACATTGTCAGG TTAATGTAGCATGCTAAGGACTCTAGAAAAATAAACTAAG
Citation	Smith CA, Hurley TM, McClive PJ, Sinclair AH. Restricted expression of DMRT3 in chicken and mouse embryos. Mech Dev. 2002 Dec;119 Suppl 1:S73-6. DIO: 10.1016/s0925-4773(03)00094-7.
Copyright	Copyright © 2003 Elsevier Science Ireland Ltd. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_429193).

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 9

Paraxial Mesoderm

13-18

stage 14

stage 16

stage 18

Diencephalon
Forebrain
Head Process
Hindbrain
Midbrain
Nasal Placode/Nerve
Neural Plate/Tube
Paraxial Mesoderm
Somites
Telencephalon

25-30

stage 25

Nasal Placode/Nerve
Telencephalon

31-32

stage 32

Gonad

all

Entry 2

GEISHA Id	DMRT3.Anderson.2020	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show ATGAACGGCTACGGCTCCCCGTACCTCTACATGGGCGGCCCCGTGTCGCAGCCGCCACGGGCGCCGCTGCAACGGACGC CCAAGTGCGCCCGGTGCCGCAACCACGGCGTGCTGTCCTGGCTGAAGGGCCACAAGCGCTACTGCCGCTTCAAGGACTG CACCTGCGAGAAGTGCATCCTCATCATCGAGCGGCAGCGGGTGATGGCCGCGCAGGTGGCCCTGCGCCGTCAGCAGGCC AACGAGAGCCTGGAGAGCCTCCTCCCGGACTCGCTGCGCTCCCTCCCGGGGCCGCCGGGCAGCGCCGAGCCCTCCGCCG CCCCTCCGGGGCCGCCGCCCTGTGCCGGGCCGCAGCGGGCCCCCGCTGAGCTGGCAGCCGCCGCCGCGCTGCGCTGGGC CACCGAGCCGCCCCCCGCGCTGCTGGGGCCGCTCCCCAAGGCAGACATCAATGAGGAGCGGCTAGGTGATGCCAGTGGA ACAGACAATGCCGAGACCTACAGTGACAAAGACACAGACCAAAGGAGTTCCCCAGACATGACTAAAGCCAAAACCTGCT TCACCCCTGAAAGCCCAGAAATTGTATCAGTGGATGAAGTTGGTTATGCAGTTCAGAAAAATGGTGGCAGCACAGAGAG CCGTCCAGAGAGCCCCAAGTACCATGCAGAGCAGAACCACCTGCTGATAGAAGGTCCTTCTGGGACAGTTTCTTTACCT TTCAGCTTGAAAGCCAACAGACCTCCACTGGAAGTGCTGAAAAAGATTTTCCCTAACCAGAAGCCGACTGTGCTGGAGT TGATCCTGAAGGGATGTGGTGGTGACCTGGTGGGCGCTGTTGAGGTTCTCTTGTCCAGTCGGTCTTCAGTGGCCGGTGG GGAGAGAACTTCAGAGTCAGATGGTCTAGTTCTGCCTTCCAATGGGCACATTTTTGAACACACGCTGAGTTCCTATCCT ATTTCCTCTTCCAAGTGGTCTGTGGGATCGGCCTTCAGGGTGCCCGACACGCTGAGGTTCTCTGCTGACTCCAGCAATG TTGTGCCCAATCCTCTGGCCGTACCTTTGCAGCACCCGTTCCCTCAGCCACCTCGCTACCCGCTGATGCTGAGGAACAC ACTGGCAAGAAACCAGTCCAGTCCTTTCCTGCCTAATGACGTCACCCTGTGGAACACCATGACACTGCAGCAGCAGTAC CAGCTGCGGTCCCAGTATGTCAGTCCTTTCTCTAGCAACTCAGCCAGCGTCTTCCGAAGCTCTCCTGTCCTTCCTTCTC GCTCCTCGGAAGATCCTAGGATCTCAATCCCTGATGACGGATGTCCTATTGTGTCTAAGCAACCTCTTTACACAGAAGA TGAGTATGACGAAAGGTCTGATTCTTCAGACTCAAGAATACTCAACACATCTTCATAGAATGACATTTGGCATACGATA AGTGATATTTGCAGTGCAGCTGAACTACTGGGCCTGAAGAGGAGAGATGTATACTCTATGAAACCCTTGCAATTGTACT AAAACGTGACTTTGCTTGGTATTGTACTATAGCAATAAAGACATAACCTATTTAATTTCTTGCACTTCATTGGATAATG CCAAATAGCAATACTCTGGCTTTAGCTCTGAGTGTGTACTACAAAGAAAGACTTTACGGCCGTCGGTTACGGGACTCTG GAAGATTCGTAGCGGAAACTGAAGCTCAAGGTCTACTTTGTTCCTTAACTCAGACAACTGGGGATATTAAACTAGAATA CTTGAATGCTGTTTTATAAGAGAGAACTCCTCAGGACATAAGAAATCAAACAAAAGTAGTTCAATTGCAAATGGACTAA AACAAGGACCAGTCATCATCTTTACATTGAAAGAAAAGGCAGAAGAATTATGCACATGGAAATAGCATGAACTGCTTCT GTACTATTTGAGCTTGGACACTTTTTAGAGAAATAATCTTACGAGTTATTCTTTTCCCATGGCTAGGTCGAAACGTGTA ATGTCAGTGTAAAACCAATTACAGCTGTGAATTGCATGAAGTGTATTGTGAAATGAACACAAGATTAAACATTGTCAGG TTAATGTAGCATGCTAAGGACTCTAGAAAAATAAACTAAG
Comments	Images provided by Claire Anderson. As insufficient information was provided to verify sequence used to synthesize probe, the sequence was obtained from NCBI (accession number: XM_429193.5). Probe provided by Andrew Sinclair. Related paper: Smith et al. Mech Dev. 2002. Restricted expression of DMRT3 in chicken and mouse embryos.