GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

DRAXIN
dorsal inhibitory axon guidance protein

Gene
Official SymbolDRAXIN
Official Full Namedorsal inhibitory axon guidance protein
CGNC ID3428
also known asAGPA3119, C1orf187, C21H1ORF187, UNQ3119, neucrin, draxin|neural tissue-specific cysteine-rich protein
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001142848
PolypeptideNP_001136320
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.11835
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human374946MIM:612682
Mouse70433ENSMUSG00000029005All phenotypic alleles (2):Targeted, knock-out(1) Targeted, other(1) MGI:1917683
Xenopus
Zebrafish619245, 100331107ENSDARG00000058256ZDB-GENE-050913-20ZFIN:ZDB-GENE-050913-20
Gene Ontology
Molecular Function
Biological Processaxon guidance, commissural neuron differentiation in spinal cord, dorsal spinal cord development, more...forebrain development, negative regulation of canonical Wnt signaling pathway
Cellular Componentextracellular region
Links to other databases
Entrez Gene419492
Ensembl GeneENSGALG00000004631
KEGGgga:419492

Entry 1

GEISHA IdDRAXIN.Naser.2009Data SourcePublication
Complete cDNA Template Probeshow
TCCTCCTCCGCGGTCCGCACGCCCGCACCCCGGCACAGCCCTGCCCTGCTCTGCCCACCGGCAGCCGCGCACAGGTGAC
GCAGAGGCCCCAGGATTATGGCAGCTTCTTCCACCTTCTTCTCTCCGTCTCTTTTCCTGTGTGTGCTGGTTCTTATTGA
CATCACCCTTGCCGTCTCCCTGGACACTGACATGAAGCTCAAAAGTGAGAACAACAACCACCTTCAAAACCAAGAGACG
TGGCCTCAGCAGCCCAGGAGTGGGCACCACCACAAGCATGGCTTGGCCAAGAAAGGGAGGGTCCTTGCCCTGCCTGTTA
GAGGGCAGCCAGCTGGGGAAGAGGCCCTCCGAGTGGGCAGTGGAGCTCCAGCCATGGAAGAGCTGGTGCCACTTGGCCA
GCCAGCAGCGCTGAAACAGGATAAGGATAAGGATGTGTTCCTGGGCTTTGAGCTCCCACACGCTGAGCGGGAGAATCAG
TCCCCTGGGTCTGAGAGGGGAAAGAAGCAGAACCGAGAGCAGCGACGGCACAGCCGCAGAGACAGGCTGAAACACCACA
GAGGGAAGACTGCCGTTGGGCCAAGCTCCCTGTATAAGAAACCTGAAAGCTTCGAGCAACAGTTTCAAAACCTCCAGGC
AGAGGAAGCAACCAGCCCGACCCCCACCGTGCTTCCCTTCACTGCATTGGATCTGGTCGTTTCCACAGAAGAGCCTCCT
GTTCTTCCAGCCACGTCGCCGCGGTCACAGGCCCGCCTCAGGCAAGATGGGGATGTGATGCCCACCCTAGATATGGCAC
TCTTTGACTGGACAGATTATGAGGACCTCAAACCAGAAATGTGGCCGTCAGCTAAAAAGAAAGAGAAACGCCGCAGTAA
GAGCTCCAATGGTGGAAATGAAACCTCATCGGCAGAAGGAGAGCCGTGTGACCACCACCTTGACTGCCTCCCAGGCTCT
TGCTGTGACTTGCGTGAGCACCTCTGCAAACCACACAATCGAGGCCTTAACAACAAATGCTACGATGACTGTATGTGCA
CAGAAGGGCTACGCTGTTATGCCAAATTCCACCGGAACCGAAGAGTGACCCGAAGGAAAGGGCGCTGTGTGGAGCCTGA
GTCGGCCAATGGAGAGCAGGGATCATTCATTAATGTTTAGGAGGGTGGGACTTTATCTCCTGCCTGGATGGTCAGTAGC
TGGAGTCAAACCACCTACACCTAGCAGTGAGGATTAGAGAAGAAGTCAAGCAAATGATTGAAGCTGCAGGCCAGGCTCC
AACAAAACTGAGGCTGGTGTTAACTCTACAGTGGTCTCAGCCTTTTCCATACCAGGACTGTGTTCCTCCTCCCTTCCCT
CAGCACGTTCCTGTCCTTGATCTGGGTCCCCCTCTCCCAGTTAGTTGGAGATGATTGTGATTGCCAGTCTGGTGGCAAG
ATATGAAAGATCCTTCAGGTCAAGAGGGATAGGAGCTTAAGCTTGTGGGGAGACAAAGGAGGGAGGCAAAGATGATAGC
AGGAAGCTGCCTGGGTGAGGAGGGACCCTCTGACAGAGCTCTCCTTCTCCCCTTTGCTCACTGCTACAGACTGATATTC
CCCAGCAGTTACACACTACCACTTCCTACCTGTCTTCTTTGAGAGTATTCACTCCCACTCCTTCCCTTCTCTCTTGCTC
CCATAGAATGACCTGGTTTCTGCAAGGATGTGGCAAGGCATCCCTGCCTGCAGCTCTCTCGTTAGTTATCCTGCCAAGT
CTGTTATTTTTAATGATTATTTTTAGGAGCTTTCAGGGGAAGTGATAGTTTTCCTAGTGAGCCAAAAACAAGGTTTTTG
GTAACAGGAGATAGGGGGACAGGCTGTTCCACTGTAGTGAATCCTGTGACATGTTGCATGTGTGTTTCCACAATGTGTA
AATAAAGCTATGATAGATAAAAAAAAA
CitationNaser IB, Su Y, Islam SM, Shinmyo Y, Zhang S, Ahmed G, Chen S, Tanaka H. Analysis of a repulsive axon guidance molecule, draxin, on ventrally directed axon projection in chick early embryonic midbrain. Dev Biol. 2009 Aug 15;332(2):351-9. Epub 2009 Jun 6.
CopyrightCopyright © 2009 Published by Elsevier Inc.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # AB427147.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
Diencephalon
Hindbrain
Midbrain
 
25
stage 25
stage 25
stage 25
Hindbrain
Midbrain
 

Entry 2

GEISHA IdDRAXIN.Anderson.2020Data SourceDirect Submission
Complete cDNA Template Probeshow
AGCCTCCTGTTCTTCCAGCCACGTCGCCGCGGTCACAGGCCCGCCTCAGGCAAGATGGGGATGTGATGCCCACCCTAGA
TATGGCACTCTTTGACTGGACAGATTATGAGGACCTCAAACCAGAAATGTGGCCGTCAGCTAAAAAGAAAGAGAAACGC
CGCAGTAAGAGCTCCAATGGTGGAAATGAAACCTCATCGGCAGAAGGAGAGCCGTGTGACCACCACCTTGACTGCCTCC
CAGGCTCTTGCTGTGACTTGCGTGAGCACCTCTGCAAACCACACAATCGAGGCCTTAACAACAAATGCTACGATGACTG
TATGTGCACAGAAGGGCTACGCTGTTATGCCAAATTCCACCGGAACCGAAGAGTGACCCGAAGGAAAGGGCGCTGTGTG
GAGCCTGAGTCGGCCAATGGAGAGCAGGGATCATTCATTAATGTTTAGGAGGGTGGGACTTTATCTCCTGCCTGGATGG
TCAGTAGCTGGAGTCAAACCACCTACACCTAGCAGTGAGGATTAGAGAAGAAGTCAAGCAAATGATTGAAGCTGCAGGC
CAGGCTCCAACAAAACTGAGGCTGGTGTTAACTCTACAGTGGTCTCAGCCTTTTCCATACCAGGACTGTGTTCCTCCTC
CCTTCCCTCAGCACGTTCCTGTCCTTGATCTGGGTCCCCCTCTCCCAGTTAGTTGGAGATGATTGTGATTGCCAGTCTG
GTGGCAAGATATGAAAGATCCTTCAGGTCAAGAGGGATAGGAGCTTAAGCTTTCCCTCTCAACAGTTGCTTGAGAAGAA
AGGCAGACACTCCTTAAGGATCAGAGGTTCTTAGAGAATTGGAAGCTTGTGGGGAGACAAAGGAGGGAGGCAAAGATGA
TAGCAGGAAGCTGCCTGGGTGAGGAGGGACCCTCTGACAGAGCTCTCCTTCTCCCCTTTGCTCACTGCTACAGACTGAT
ATTCCCCAGCAGTTACACACTACCACTTCCTACCTGTCTTCTTTGAGAGTATTCACTCCCACTCCTTCCCTTCTCTCTT
GCTCCCATAGAATGACCTGGTTTCTGCAAGGATGTGGCAAGGCATCCCTGCCTGCAGCTCTCTCGTTAGTTATCCTG
CommentsImages and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST545l1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 11
stage 11
stage 12
stage 12
stage 12
stage 12
stage 12
stage 12
stage 12
Forebrain
Head Mesenchyme
Heart Tube
Hindbrain
Midbrain
Neural Crest
Neural Plate/Tube
Notochord
Somites
Tail
Ventricles
Widespread Expression
section 11
section 20
section 44
section 55
stage 10+
stage 11-
stage 12-

Entry 3

GEISHA IdDRAXIN.Anderson.2019Data SourcePublication
Complete cDNA Template Probeshow
CAGAAGAGCCTCCTGTTCTTCCAGNCCACGTCGCCGCGGTCACAGGCCCGCCTCAGGCAAGATGGGGATGTGATGCCCA
CCCTAGATATGGCACTCTTTGACTGGACAGATTATGAGGACCTCAAACCAGAAATGTGGCCGTCAGCTAAAAAGAAAGA
GAAACGCCGCAGTAAGAGCTCCAATGGTGGAAATGAAACCTCATCGGCAGAAGGAGAGCCGTGTGACCACCACCTTGAC
TGCCTCCCAGGCTCTTGCTGTGACTTGCGTGAGCACCTCTGCAAACCACACAATCGAGGCCTTAACAACAAATGCTACG
ATGACTGTATGTGCACAGAAGGGCTACGCTGTTATGCCAAATTCCACCGGAACCGAAGAGTGACCCGAAGGAAAGGGCG
CTGTGTGGAGCCTGAGTCGGCCAATGGAGAGCAGGGATCATTCATTAATGTTTAGGAGGGTGGGACTTTATCTCCTGCC
TGGATGGTCAGTAGCTGGAGTCAAACCACCTACACCTAGCAGTGAGGATTAGAGAAGAAGTCAAGCAAATGATTGAAGC
TGCAGGCCAGGCTCCAACAAAACTGAGGCTGGTGTTAACTCTACAGTGGTCTCAGCCTTTTCCATACCAGGACTGTGTT
CCTCCTCCCTTCCCTCAGCACGTTCCTGTCCTTGATCTGGGTCCCCCTCTCCCAGTTAGATGGAGATGACTGTGATTGC
CAGTCTGGTGGCAAGATATGAAAGATCCTTCAGGTCACGAGGGATAGGAGCTTAAGCTTTCCCTCTCAN
CitationAnderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
CopyrightCopyright © 2019 Elsevier Inc. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Andersonet al. 2019.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
stage 12
Ventricles
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.11835

Mouse

EmageMGI:1917683
EurexpressMGI:1917683
MGI GXDMGI:1917683

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050913-20
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona